prot_H-elongata_contig59020.13411.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59020.13411.1
Unique Nameprot_H-elongata_contig59020.13411.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 3.430e-27
Identity = 45/76 (59.21%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    7 EWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKTGVLVDCEIPSAAGEGGNDIVIANG 82
            E ST G CIVCFG Y+YGEELCRL C HLYHA+CID W DG NHGWCPLCKT ++        AG   N+  + +G
Sbjct:  245 EGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNNAVRSG 320          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.460e-26
Identity = 45/76 (59.21%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    7 EWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKTGVLVDCEIPSAAGEGGNDIVIANG 82
            E ST G CIVCFG Y+YGEELCRL C HLYHA+CID W DG NHGWCPLCKT ++      + AG   N+  + +G
Sbjct:  252 EGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIISTSGYLNPAGSSINNNAVRSG 327          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 3.690e-24
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    5 AEEWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKTGVLVDCEIPSAAGEGG 74
            +E WS +  CI+CFG Y+ G+ LCRLPCRH YHA+CIDAW D   H WCPLCK+ +L+  E P  + E G
Sbjct:   69 SELWSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLLPSE-PRNSSENG 137          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 4.740e-23
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    1 TRGRAEEWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKTGVLVDCE 65
            T G +E WS+   CI+CFG Y+ G+ LCRLPCRH YHA+CIDAW DG  H WCPLCK+ +L   E
Sbjct:  445 TGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSE 509          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 9.220e-18
Identity = 34/52 (65.38%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    7 EWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKT 58
            EWST   CIVCFG Y  G+ L RLPCRH+YHAQCID W D      CPLCKT
Sbjct:  252 EWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKT 303          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.970e-17
Identity = 33/52 (63.46%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    7 EWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKT 58
            EWST   CIVCF  Y  G+ L RLPCRH+YHAQCID W D      CPLCKT
Sbjct:  152 EWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKT 203          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.420e-16
Identity = 33/52 (63.46%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    7 EWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKT 58
            EWST   CIVCFG Y  G+ L  LPCRH+YHAQCID W D      CPLCKT
Sbjct:  345 EWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKT 396          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: A0A2J6LSC2_LACSA (RING-type domain-containing protein n=4 Tax=Lactuca TaxID=4235 RepID=A0A2J6LSC2_LACSA)

HSP 1 Score: 67.8 bits (164), Expect = 3.010e-11
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   14 CIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKTGVLVDCEIPSAAGEG 73
            C +C   Y  G+E+  LPCRH YHA C+D W   VN G CP+C+  V   C+ P+AA EG
Sbjct:  413 CYICLVDYEEGDEIRVLPCRHEYHAPCVDKWLKEVN-GVCPVCRCNV---CDTPAAAAEG 468          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: A0A3S3QJZ8_9MAGN (E3 ubiquitin-protein ligase RHA2A n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QJZ8_9MAGN)

HSP 1 Score: 64.3 bits (155), Expect = 7.260e-11
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 0
Query:   14 CIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKTGVLVDCEIPSAAGEGGNDIV 78
            C+VC  G   GE++ +L CRH++H +C+D WFD  N   CPLC+  ++ +  +       G D+V
Sbjct:   93 CVVCLSGLREGEQVRKLACRHVFHRECLDGWFDHQNLN-CPLCRAPLVAEERVAEMGRRVGGDLV 156          
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Match: A0A6A1V0Q0_9ROSI (E3 ubiquitin-protein ligase RHA2A n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1V0Q0_9ROSI)

HSP 1 Score: 64.3 bits (155), Expect = 7.820e-11
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   14 CIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNHGWCPLCKTGVLVDCEIPSAAGEGGNDIV 78
            C+VC      G+++ RLPCRH++H +C + W D +N   CPLC++ ++ D  +  A+   G+D+V
Sbjct:   95 CVVCLSTLREGDQVRRLPCRHVFHKECFNGWLDHLNFN-CPLCRSPLVSDERVALASRRVGSDLV 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59020.13411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSX3_ECTSI3.430e-2759.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE1.460e-2659.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE3.690e-2455.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI4.740e-2360.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI9.220e-1865.38RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE1.970e-1763.46RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI1.420e-1663.46RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A2J6LSC2_LACSA3.010e-1148.33RING-type domain-containing protein n=4 Tax=Lactuc... [more]
A0A3S3QJZ8_9MAGN7.260e-1136.92E3 ubiquitin-protein ligase RHA2A n=1 Tax=Cinnamom... [more]
A0A6A1V0Q0_9ROSI7.820e-1136.92E3 ubiquitin-protein ligase RHA2A n=1 Tax=Morella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 14..56
e-value: 1.8E-5
score: 34.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 14..57
e-value: 1.3E-9
score: 38.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 14..57
score: 10.896
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..61
e-value: 9.4E-15
score: 55.6
NoneNo IPR availablePANTHERPTHR45969FAMILY NOT NAMEDcoord: 10..63
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 13..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59020contigH-elongata_contig59020:218..3090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59020.13411.1mRNA_H-elongata_contig59020.13411.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59020 218..3090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59020.13411.1 ID=prot_H-elongata_contig59020.13411.1|Name=mRNA_H-elongata_contig59020.13411.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
TRGRAEEWSTAGVCIVCFGGYSYGEELCRLPCRHLYHAQCIDAWFDGVNH
GWCPLCKTGVLVDCEIPSAAGEGGNDIVIANGAEVGLFVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD