prot_H-elongata_contig59005.13409.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59005.13409.1
Unique Nameprot_H-elongata_contig59005.13409.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: D7FRV6_ECTSI (Complex1_LYR_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV6_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.670e-32
Identity = 57/78 (73.08%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    1 MTQPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFPPEEAEVAFEKGRQQLEVIRRQATISHLYPHQ 78
            M QP+RTAVLGLY+ LRRQGA LMDYN R+YALRR R+GFE+A+GF PEEAE AF+KG+++LE++RRQA IS LYPHQ
Sbjct:    1 MAQPSRTAVLGLYKGLRRQGALLMDYNYREYALRRARRGFELARGFAPEEAEAAFKKGQRELEIVRRQAAISQLYPHQ 78          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: A0A0G4IIG7_PLABS (Complex1_LYR_dom domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IIG7_PLABS)

HSP 1 Score: 65.5 bits (158), Expect = 2.860e-12
Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    2 TQPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFPPEEAEVAFEKGRQQLEVIRRQATISHLYPH 77
            T PTR+A L LY+ +RR G +  D+N R+Y +RR R+ FE  +     +A   +EKG + L+V+RRQ+T++ +Y H
Sbjct:    4 TPPTRSACLALYKNVRRAGLQFKDFNFREYVVRRARERFEAGRAATGADAARLYEKGIEDLQVVRRQSTLNRMYAH 79          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: W7TGY8_9STRA (Complex 1 LYR protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGY8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.850e-12
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    4 PTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFPPEEAEVAFEKGRQQLEVIRRQATISHLYP 76
            P+R  VLGL+R L RQ  RL DYN R YA RR   GF+  +    EEA   +  G + LE+++RQA ISHLYP
Sbjct:   19 PSRQHVLGLFRSLLRQAGRLEDYNFRSYAKRRVALGFQEGRSSSGEEAAREYRDGVKNLEMLKRQALISHLYP 91          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: A0A2C9KVK4_BIOGL (Complex1_LYR_dom domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KVK4_BIOGL)

HSP 1 Score: 61.6 bits (148), Expect = 1.140e-10
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 MTQPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFPP-EEAEVAFEKGRQQLEVIRRQATISHLY 75
            M  PTRT VL LY+++ R+G ++ DYN R YALRRTR  F+  +     E+ ++  +K  + LE+++RQAT+S LY
Sbjct:    7 MAAPTRTTVLTLYKQILREGKKVTDYNFRMYALRRTRDAFKENKNVTDLEQMQLLTQKAIKNLEMLKRQATVSQLY 82          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: UPI00035A1C09 (LYR motif-containing protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A1C09)

HSP 1 Score: 58.2 bits (139), Expect = 2.390e-9
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 MTQPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFPPE-EAEVAFEKGRQQLEVIRRQATISHLY 75
            M   TRT VL LY+EL ++  R+ DYN R+YALRRTR  F+  +      + +    K ++ LE++RRQAT+S L+
Sbjct:    1 MAASTRTKVLSLYKELLKESKRVTDYNFRNYALRRTRDAFKENKAITDAGQIQALVVKAQENLEMLRRQATVSQLF 76          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: A0A8H7BM76_9FUNG (Complex1_LYR_dom domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BM76_9FUNG)

HSP 1 Score: 56.6 bits (135), Expect = 8.980e-9
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    2 TQPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEM-AQGFPPEEAEVAFEKGRQQLEVIRRQATISHLY 75
            T  TR  VL LYR+  R G +   YN RDYALRR+R  F   A    P +     EK +++L++++RQA+IS LY
Sbjct:    3 TPATRAQVLALYRQFFRHGNKFASYNFRDYALRRSRDAFRANAAETDPAKIAACIEKAQKELDILKRQASISTLY 77          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: UPI0008FD5861 (LYR motif-containing protein 4 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD5861)

HSP 1 Score: 56.6 bits (135), Expect = 9.410e-9
Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    4 PTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFP-PEEAEVAFEKGRQQLEVIRRQATISHLY 75
            P+R+ VL L R L R      DYN R+Y  RRT  GF + Q    PE+  VAFE+G+ QLEV +RQA +  LY
Sbjct:    5 PSRSEVLHLCRSLLRVARVFSDYNIREYTKRRTVDGFRLNQSLTDPEKVYVAFEEGKAQLEVAKRQAAVYSLY 77          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: A0A0C2GDP2_9BILA (Complex 1 protein (Fragment) n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2GDP2_9BILA)

HSP 1 Score: 57.0 bits (136), Expect = 1.050e-8
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    3 QPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFP-PEEAEVAFEKGRQQLEVIRRQATISHLYPH 77
            Q  ++  + LY++L R+ A+   YN R +A RR R+ FE  +G   P   +   +KG++QLEVIRRQ  IS LYPH
Sbjct:    4 QVAKSVWVNLYKQLEREAAKFPQYNIRVFAQRRIREHFEANRGVTDPAVQKELLKKGKEQLEVIRRQVVISQLYPH 79          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: A0A8J5XP77_DIALT (Complex1_LYR_dom domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XP77_DIALT)

HSP 1 Score: 55.5 bits (132), Expect = 2.440e-8
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    6 RTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGF--PPEEAEVAFEKGRQQLEVIRRQATISHLYP 76
            RT VL L+++L R       YN R+YALRR R GF    G   P + AE+  E G +QLEV+R+QA IS LYP
Sbjct:    4 RTQVLALFKKLMRASRSFTHYNFREYALRRVRLGFREKAGVSDPAQIAELVGE-GSKQLEVVRKQALISQLYP 75          
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Match: A0A3S0ZHP3_ELYCH (Complex1_LYR_dom domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZHP3_ELYCH)

HSP 1 Score: 55.5 bits (132), Expect = 2.610e-8
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 0
Query:    1 MTQPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFPPE-EAEVAFEKGRQQLEVIRRQATISHLY 75
            M  P R  VL LY+ L R+  ++ DYN R YA+RRT+  F+  +        +   +KGR+ LEV++RQA +S LY
Sbjct:    1 MAAPVRQTVLTLYKSLLRESGKITDYNFRLYAIRRTQDAFKENKAVSDTARVQALLQKGRENLEVLKRQAVLSQLY 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59005.13409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRV6_ECTSI1.670e-3273.08Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A0G4IIG7_PLABS2.860e-1242.11Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
W7TGY8_9STRA3.850e-1250.68Complex 1 LYR protein n=1 Tax=Nannochloropsis gadi... [more]
A0A2C9KVK4_BIOGL1.140e-1044.74Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
UPI00035A1C092.390e-943.42LYR motif-containing protein 4 n=1 Tax=Aplysia cal... [more]
A0A8H7BM76_9FUNG8.980e-944.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
UPI0008FD58619.410e-947.95LYR motif-containing protein 4 n=1 Tax=Tarenaya ha... [more]
A0A0C2GDP2_9BILA1.050e-843.42Complex 1 protein (Fragment) n=1 Tax=Ancylostoma d... [more]
A0A8J5XP77_DIALT2.440e-849.32Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A3S0ZHP3_ELYCH2.610e-840.79Complex1_LYR_dom domain-containing protein n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 8..63
e-value: 3.4E-9
score: 36.6
NoneNo IPR availablePANTHERPTHR13166PROTEIN C6ORF149coord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59005contigH-elongata_contig59005:1517..3459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59005.13409.1mRNA_H-elongata_contig59005.13409.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59005 1517..3459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59005.13409.1 ID=prot_H-elongata_contig59005.13409.1|Name=mRNA_H-elongata_contig59005.13409.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
MTQPTRTAVLGLYRELRRQGARLMDYNNRDYALRRTRKGFEMAQGFPPEE
AEVAFEKGRQQLEVIRRQATISHLYPHQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR