prot_H-elongata_contig11714.1340.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11714.1340.1
Unique Nameprot_H-elongata_contig11714.1340.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length377
Homology
BLAST of mRNA_H-elongata_contig11714.1340.1 vs. uniprot
Match: D8LEU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU6_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 4.600e-38
Identity = 141/390 (36.15%), Postives = 195/390 (50.00%), Query Frame = 0
Query:    4 WTKFPPVPLRARAPSLYTLP-----ALLVTCEGYCEGCHGSNTPSHNTAFNDKNKINQSLILDHDVVSRLSLARSVFSLRSSDVLAAFAPP--------LTSRRSTTQGA--RSRAS----TPLATTGFTKSPRTSSPDALGHRLRAVAKNAASACIGRPWG-SSWPIYLPVNNQSHTAFRSEIRTRTY------------GVESRLHKKDRESNMWRDTWGPVTALGRRLLAKRLNALREVRNQRMLGVSDALRIRHAGRRLRSGTVMKALDAMGGALDSRDSRSREERVPKAHIEQLLSHVEQFAFSDSQLC-DLSEAAPRARRKGPSDGVSSKGSPHRLCQELVVSLREK---IQRGARKRAGMNIGCCQCRDIMFPQTSSPAAYHN 357
            W  FPPVPLRARAPSLYTLP     +L        E   G   P+    F           LD +V +RL+ A SVF LR+SDVL AF+P         L +  +T+  +  RSR S    T     G     R SSP+AL  RLR  A++A+ A +GRPW  SS  + L   ++      + +R +              G++    K+ R      D +GP+T LG+RL A+R NA    R +R++G +DA R  H GR+LR G  + AL+ +  ALD+R S +RE  V  AHI +LL  V +F FSDSQLC   +EAA         +G++ + S  R+CQEL+  LR+K   ++  +      N  CC  R    P+  SP   +N
Sbjct: 1862 WPTFPPVPLRARAPSLYTLPPPSSGSLRRKPRDSSERAPG--VPASKGPFTK---------LDPEVAARLNSASSVFCLRASDVLTAFSPXXXXXXXXXLIASTATSSDSLPRSRPSAIPGTSAGREGTGGFRRLSSPEALRQRLRVEAQDASLAGLGRPWLLSSRAVSLQTRHKQEQQRSAFLRKKGNSGKPIGMWGGCGGIDQVRGKRRRT-----DAFGPLTPLGQRL-ARRYNAGVAARRRRIIGETDAFRAVHVGRQLRIGASLNALERVERALDARLSCAREATVSSAHIAELLDVVGRFVFSDSQLCGQRTEAASTPSGGEAVEGIAPQRSRCRICQELLEDLRQKFPVVREQSSWGNETNPFCCDRRWQGSPRIGSPEWENN 2234          
BLAST of mRNA_H-elongata_contig11714.1340.1 vs. uniprot
Match: A0A6H5KGL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL4_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 9.130e-32
Identity = 120/309 (38.83%), Postives = 160/309 (51.78%), Query Frame = 0
Query:    4 WTKFPPVPLRARAPSLYTLP-----ALLVTCEGYCEGCHGSNTPSHNTAFNDKNKINQSLILDHDVVSRLSLARSVFSLRSSDVLAAFAPP--------LTSRRSTTQGA--RSRAS----TPLATTGFTKSPRTSSPDALGHRLRAVAKNAASACIGRPWG-SSWPIYLPVNNQSHTAFRSEIRT--------RTYGVESRLHKKDRESNMWRDTWGPVTALGRRLLAKRLNALREVRNQRMLGVSDALRIRHAGRRLRSGTVMKALDAMGGALDSRDSRSREERVPKAHIEQLLSHVEQFAFSDSQL 284
            W  FPP+PLRARAPSLYTLP     +L        E   G   P+    F           LD +V +RL  A SVF LR+SDVL AF+PP        L +R +T+  +   SR S    T     G    PR SSP+ L  RLR  A++A+ A +GRPW  SS    LP  ++      + +R         R +G    +    RE     D +GP+T LG+RL A+R NA    R +R+LG +DA R  H GR+LR G  + AL+ +  AL++R S +RE +V  AHI +LL  V +F FSDSQ+
Sbjct: 2004 WPTFPPLPLRARAPSLYTLPPPSSGSLRRKPRDSSERAPG--VPASKGPFTK---------LDPEVAARLHSASSVFCLRASDVLTAFSPPXXXXSPSRLIARTATSSDSLPSSRPSVIPGTSAGREGTRGFPRLSSPEILRQRLRVEAQDASLAGLGRPWLLSSHANRLPTRHKQEQVRSAFLRKKGSSRKPIRVWGGCGGIDLV-REKRRRTDAFGPLTPLGQRL-ARRYNAGVAARRRRILGETDAFRAVHVGRQLRIGASLNALERVERALNARLSCAREAKVSSAHIAELLDVVGRFVFSDSQV 2299          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11714.1340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEU6_ECTSI4.600e-3836.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGL4_9PHAE9.130e-3238.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11714contigH-elongata_contig11714:3271..4930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11714.1340.1mRNA_H-elongata_contig11714.1340.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11714 2809..7202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11714.1340.1 ID=prot_H-elongata_contig11714.1340.1|Name=mRNA_H-elongata_contig11714.1340.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=377bp
MISWTKFPPVPLRARAPSLYTLPALLVTCEGYCEGCHGSNTPSHNTAFND
KNKINQSLILDHDVVSRLSLARSVFSLRSSDVLAAFAPPLTSRRSTTQGA
RSRASTPLATTGFTKSPRTSSPDALGHRLRAVAKNAASACIGRPWGSSWP
IYLPVNNQSHTAFRSEIRTRTYGVESRLHKKDRESNMWRDTWGPVTALGR
RLLAKRLNALREVRNQRMLGVSDALRIRHAGRRLRSGTVMKALDAMGGAL
DSRDSRSREERVPKAHIEQLLSHVEQFAFSDSQLCDLSEAAPRARRKGPS
DGVSSKGSPHRLCQELVVSLREKIQRGARKRAGMNIGCCQCRDIMFPQTS
SPAAYHNDSELQESRPVKSLKLERRC*
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