mRNA_H-elongata_contig58977.13400.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A6H5LB88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB88_9PHAE) HSP 1 Score: 259 bits (662), Expect = 2.550e-78 Identity = 121/152 (79.61%), Postives = 139/152 (91.45%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAETGVELAD+LS RLG+ASNGE+LS CRRNK+LM EQVRSHGVRA RQ++ARSWDDCEAFL DW P PFKAVVKPL+SAGSDDVYLC ++V++AF +IDGK+NGLGGVNEGAL+QE+LDG E+VVD+VSRD VHR+CAIWEYDKRSVNG
Sbjct: 17 GAETGVELADILSSRLGLASNGEELSQCRRNKHLMAEQVRSHGVRAVRQMLARSWDDCEAFLQDWNPDPFKAVVKPLESAGSDDVYLCRSLEDVKEAFSVIDGKVNGLGGVNEGALVQEYLDGTEYVVDSVSRDGVHRICAIWEYDKRSVNG 168
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: D7FXU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU1_ECTSI) HSP 1 Score: 258 bits (660), Expect = 1.020e-77 Identity = 121/152 (79.61%), Postives = 139/152 (91.45%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAETGVELAD+LS RLG+ASNGE+LSLCRRNK+LM EQVRSH VRA RQ++ARSWDDCEAFL DW P PFKAVVKPL+SAGSDDVYLC ++V++AF +IDGK+NGLGGVNEGAL+QE+LDG E+VVD+VSRD VHR+CAIWEYDKRSVNG
Sbjct: 232 GAETGVELADILSSRLGLASNGEELSLCRRNKHLMAEQVRSHEVRAVRQMLARSWDDCEAFLQDWNPDPFKAVVKPLESAGSDDVYLCRSLEDVKEAFSVIDGKVNGLGGVNEGALVQEYLDGTEYVVDSVSRDGVHRICAIWEYDKRSVNG 383
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A835Z961_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z961_9STRA) HSP 1 Score: 237 bits (604), Expect = 5.610e-70 Identity = 116/152 (76.32%), Postives = 130/152 (85.53%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAETGVELADVLSHRLG SNGE+LS RRNKY+MGEQVRS GVRA +Q MAR+WDD EAF +W P PF+ VVKPL+SAGSDDVYLC+ +EV DAF I+GKINGLG VNEGAL+QE+LDG E+VVDTVSRD VH+V AIWEYDKRSVNG
Sbjct: 645 GAETGVELADVLSHRLGTRSNGEELSEARRNKYMMGEQVRSSGVRAVQQKMARTWDDVEAFFSEWTPEPFRVVVKPLESAGSDDVYLCHSKEEVHDAFFTINGKINGLGCVNEGALVQEYLDGIEYVVDTVSRDGVHKVVAIWEYDKRSVNG 796
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A7S2VWX9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Akashiwo sanguinea TaxID=143672 RepID=A0A7S2VWX9_9DINO) HSP 1 Score: 185 bits (469), Expect = 3.100e-57 Identity = 90/152 (59.21%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAE GV LAD L+H +G+ N LS RRNKYLMGE +R GVR+A+Q + WD+ E+FL DW P PFK +VKP QSAGSDDV+LC +EVR AF I+G IN +G +NEG LIQEFL+G E+VVD+VS D H+V +IW+YDKR NG
Sbjct: 15 GAENGVSLADELAHAMGLRCNPIALSNARRNKYLMGETIRQAGVRSAKQTICTEWDEVESFLCDWNPDPFKVIVKPNQSAGSDDVFLCKSLEEVRAAFNSINGAINEIGEINEGVLIQEFLEGIEYVVDSVSLDGEHKVVSIWQYDKREANG 166
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A812Z196_SYMMI (DdaF protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z196_SYMMI) HSP 1 Score: 182 bits (461), Expect = 4.080e-55 Identity = 90/151 (59.60%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVN 453
GAETGVELAD LS LG+ +NG S RRNKY+MGE +R+ G+RA +QL A +W + FL +W+P PF+ V+KP+ SAGSDDV LC V++AFG I GKIN LG VN L+QE+LDGPEFVVD VSRD H+V AIWEYD R N
Sbjct: 3 GAETGVELADKLSSHLGLRTNGTSKSEARRNKYIMGETIRAAGIRAVKQLRASTWGEIMEFLDEWRPSPFQVVLKPISSAGSDDVILCQSVQGVQEAFGRIIGKINALGLVNSAVLVQEYLDGPEFVVDMVSRDGEHKVVAIWEYDWRPAN 153
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A2R5GJX8_9STRA (ATP-grasp domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJX8_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.590e-53 Identity = 89/152 (58.55%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAE GV +AD L+ +G+ N +LS+ RR+KYLMGE +R GVRA +Q ++ WD+ E F+LDW P PFK +VKP SAGSDDV+LC DEVR AF I+G IN G VNEG L+QEFL+G E+VVD+VSR+ H+V AIW+YDKRS+NG
Sbjct: 108 GAENGVVVADYLAAAMGLVHNPTELSIARRSKYLMGETIRLAGVRAVKQTISVDWDEIERFVLDWNPSPFKVIVKPNASAGSDDVFLCKNIDEVRAAFDCINGAINEFGEVNEGVLVQEFLEGIEYVVDSVSRNGEHKVVAIWQYDKRSLNG 259
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A7S1XUT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUT4_9STRA) HSP 1 Score: 186 bits (472), Expect = 5.840e-52 Identity = 90/152 (59.21%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAETGV LAD L+ RLG +NG +LSL RRNKY MGE VR+ GVRA +QL A W FL +W P PF+ +VKP++SAG+DDV+LC +EV++AF ++GKINGLG N G L+QE+LDG EFV+D VSRD VH+ AIW+YDK+ NG
Sbjct: 659 GAETGVLLADRLAVRLGTRNNGMELSLHRRNKYFMGETVRASGVRAVKQLRAEEWGPIADFLREWNPSPFRVIVKPIESAGTDDVFLCKSTEEVQEAFLSVNGKINGLGQRNIGVLVQEYLDGEEFVIDHVSRDGVHKCVAIWQYDKKPTNG 810
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A7S1U8K3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8K3_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.090e-52 Identity = 90/152 (59.21%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAETGV LAD L+ RLG +NG +LSL RRNKY MGE VR+ GVRA +QL A W FL +W P PF+ +VKP++SAG+DDV+LC +EV++AF ++GKINGLG N G L+QE+LDG EFV+D VSRD VH+ AIW+YDK+ NG
Sbjct: 668 GAETGVLLADRLAVRLGTRNNGMELSLHRRNKYFMGETVRASGVRAVKQLRAEEWGPIADFLREWNPSPFRVIVKPIESAGTDDVFLCKSTEEVQEAFLSVNGKINGLGQRNIGVLVQEYLDGEEFVIDHVSRDGVHKCVAIWQYDKKPTNG 819
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A7S2SAZ8_9STRA (Hypothetical protein n=3 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SAZ8_9STRA) HSP 1 Score: 179 bits (455), Expect = 6.660e-52 Identity = 89/152 (58.55%), Postives = 107/152 (70.39%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
G E GVELA+ L+H G SN ++ L RRNKY MGE VR+ GVRA Q A +D + FL W P P+K +VKP +SAGSDDV+LC+ +EVR AF I G N LG N GALIQEFL G EFVVDT+SR+ VH++CAIW+YDKR VNG
Sbjct: 79 GCENGVELANELAHHFGTLSNPPEMRLARRNKYNMGEAVRAAGVRAVEQSFAMCTEDVDNFLARWTPEPYKIIVKPNESAGSDDVFLCHSDEEVRAAFRKIQGTPNALGVTNHGALIQEFLSGSEFVVDTISRNGVHKICAIWKYDKRHVNG 230
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Match: A0A7R9YE89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE89_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.110e-51 Identity = 96/152 (63.16%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 1 GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLMARSWDDCEAFLLDWKPMPFKAVVKPLQSAGSDDVYLCYGPDEVRDAFGIIDGKINGLGGVNEGALIQEFLDGPEFVVDTVSRDSVHRVCAIWEYDKRSVNG 456
GAETGV LAD L+ L + NGE+ S RRNKYLMGE VR+ GVRA +QL A W+ FL W P PF AVVKPL+SAGSDDV+ C +EV AF I GK NGLG +N+GAL+QEFL G EFV+D VSRD V++V AIWEYDKRSVNG
Sbjct: 215 GAETGVSLADQLTFALELRGNGEEHSRARRNKYLMGEAVRAAGVRAVKQLYATEWEQVAEFLQGW-PEPFLAVVKPLESAGSDDVFKCGSAEEVETAFRSIHGKKNGLGQLNDGALVQEFLAGREFVIDGVSRDGVYKVMAIWEYDKRSVNG 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58977.13400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58977.13400.1 >prot_H-elongata_contig58977.13400.1 ID=prot_H-elongata_contig58977.13400.1|Name=mRNA_H-elongata_contig58977.13400.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp GAETGVELADVLSHRLGVASNGEDLSLCRRNKYLMGEQVRSHGVRAARQLback to top mRNA from alignment at H-elongata_contig58977:387..1624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58977.13400.1 ID=mRNA_H-elongata_contig58977.13400.1|Name=mRNA_H-elongata_contig58977.13400.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1238bp|location=Sequence derived from alignment at H-elongata_contig58977:387..1624- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58977:387..1624- >mRNA_H-elongata_contig58977.13400.1 ID=mRNA_H-elongata_contig58977.13400.1|Name=mRNA_H-elongata_contig58977.13400.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig58977:387..1624- (Himanthalia elongata Himel1 dioecious)back to top |