prot_H-elongata_contig5896.13399.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5896.13399.1
Unique Nameprot_H-elongata_contig5896.13399.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length541
Homology
BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: D8LMX5_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX5_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 5.390e-142
Identity = 306/544 (56.25%), Postives = 348/544 (63.97%), Query Frame = 0
Query:    1 MRAFMSMFMELVGMFGSE---MPNGCNPGCKGGHVHFPSNISEDMADMPSATVALSKMFGDRGQEETWSTEDDEDDPEXXXXXXXXXXXXXXXXDEGERFTLGYGDPGVHGYGGGNGNTDFCGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVAETATSGDIPYKTVSGVGAPSS---ECLWEPMVSRYFHMNLKEEAEQQRVAGMVAAGFMSGETLELGAEALRQARALKKRQDXXXXXXXXXXRDSAARLQETGNRECQAESKHVEDTTAEIDPSFSAAAKRKESARLKRKEEDERRVDIFSACRGGEVEVVRMMLETGLVRCTEREKENGQSGASLLHACVTNFAGCREHTAELKALAIDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLEERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIHGPVLGGVRVNGGXXXXGRVFDPSRIDGGGGME------AGTALELARALLSKEGPGPRKKGLQEVGRQLSAATQAVERAKEQR 532
            MRAFMSMFMELVGMFGS+   MPNGC PGCKGGHV  P  +  DMADMPSA+VA S MFG+R QEETWS+E+++                                                          XXXXXXXXXXXXXXXXXX  + AE   +G       +G G P++   ECLWEPMV  YFHMNLKEE EQQR AG+  A   + E ++L  EALRQARALKKR  XXXXXXXXXX                                 S A KRKE  RLKRK E+ERRV +F+ACR G VE VR+ML TGL+RCTERE+ENG SGASLLH+CVT+FAG  ++  +LK LAIDRLSIAAM+L    PAVDAG VDS GLTVLH V++ALDLPYL LLLEERQKSQ+RRDQIL++ERCLLKGWTPLHY AAEGSP GVS L+TAGA+V++ G VL G+             +PS  +G            GTAL+LARALLSKEG GPRKKGLQEV RQLSAATQAVERAKEQR
Sbjct:   80 MRAFMSMFMELVGMFGSDIPSMPNGCGPGCKGGHVQMPPGMPPDMADMPSASVAFSMMFGERPQEETWSSEEED---------------------------------------------------------GXXXXXXXXXXXXXXXXXXAAAAAEAFKAG------AAGAGGPAAAGGECLWEPMVRHYFHMNLKEEVEQQRAAGLGGASGGTSEAVQLEDEALRQARALKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXDTSVADKRKEVVRLKRKAEEERRVGLFTACRAGFVEEVRLMLGTGLIRCTERERENGSSGASLLHSCVTDFAGSPDNAPQLKELAIDRLSIAAMILASTDPAVDAGWVDSVGLTVLHRVAEALDLPYLALLLEERQKSQERRDQILLDERCLLKGWTPLHYAAAEGSPVGVSTLLTAGASVSVRGAVLDGI-------------EPSSSNGAXXXXXXXXXXGGTALQLARALLSKEGAGPRKKGLQEVARQLSAATQAVERAKEQR 541          
BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: A0A6H5K1P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P9_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 3.920e-99
Identity = 279/541 (51.57%), Postives = 319/541 (58.96%), Query Frame = 0
Query:    1 MRAFMSMFMELVGMFGSE---MPNGCNPGCKGGHVHFPSNISEDMADMPSATVALSKMFGDRGQEETWSTEDDEDDPEXXXXXXXXXXXXXXXXDEGERFTLGYGDPGVHGYGGGNGNTDFCGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVAETATSGDIPYKTVSGVGAPSSECLWEPMVSRYFHMNLKEEAEQQRVAGMVAAGFMSGETLELGAEALRQARALKKRQDXXXXXXXXXXRDSAARLQETGNRECQAESKHVEDTTAEIDPSFSAAAKRKESARLKRKEEDERRVDIFSACRGGEVEVVRMMLETGLVRCTEREKENGQSGASLLHACVTNFAGCREHTAELKALAIDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLEERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIHGPVLGGVRVNGGXXXXGRVFDPSRIDGGGGME------AGTALELARALLSKEGPGPRKKGLQEVGRQLSAATQAVERAKEQR 532
            MRAFMSMFMELVGMFGS+   MPNGC PGCKGGHV  PS +  D+ADMPSA+VA S MFG+R QEETWS+E++E +      XXXXXXXXXXXX                         D CG+   XXXXXXXXXXXXXXXXXXXXXXXX                  G      ECLWEPMV  YFHMNLKEE EQQR AG+      + E ++L  EALRQARA      XXXXXXXXXX            R+ Q +    ++ T       S A KRKE  RLKRK E+ERRV +F+ACR G VE VR+ML TGL+RCTERE+ENG SGASLLH+CVT+FAG  ++  +LK LA+DRLSIAA++LD                                                   ERCLLKGWTPLHY AAEGSP  VS L+ AGA+V++ G VL G+             +PS  +G            GTAL+LARALLSKEG GPRKKGLQEV RQLSAATQAVERAKEQR
Sbjct:   80 MRAFMSMFMELVGMFGSDIPSMPNGCGPGCKGGHVQMPSGMPPDIADMPSASVAFSMMFGERPQEETWSSEEEEGEGIEKYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAQRGDGCGEAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXGPAEAGGECLWEPMVRHYFHMNLKEEVEQQRAAGLGGTSGGTSEAVQLEEEALRQARAXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDAQQDEGKKDEET-------SVADKRKEVVRLKRKAEEERRVGLFTACRAGFVEEVRLMLGTGLIRCTERERENGTSGASLLHSCVTDFAGSPDNAPQLKELAVDRLSIAAILLD---------------------------------------------------ERCLLKGWTPLHYAAAEGSPVCVSTLLAAGASVSVRGAVLDGI-------------EPSSSNGAXXXXXXXXXXGGTALQLARALLSKEGAGPRKKGLQEVARQLSAATQAVERAKEQR 540          
BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: A0A836CBZ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.760e-29
Identity = 102/250 (40.80%), Postives = 135/250 (54.00%), Query Frame = 0
Query:  297 IFSACRGGEVEVVRMMLETGLVRCT--EREKENGQSGASLLHACVTNFAGCREH-TAELKALAIDRLSIAAMVL--DCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLEERQKSQDRR--DQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIHGPVLGGVRVNGGXXXXGRVFDPSRIDGGGGMEAGTALELARALLSKEGPGPRKKG--LQEVGRQLSAATQAVERAKEQRERKER 537
            +F+ACR G +E  R +L+ G    T  ERE E G+SG SLLHACVT  A  +E            RL IA ++L  +  + AVD   VD  GLTVLH  ++A D+P L  LL +R +SQ      QIL+NERCL +GWTPLHY A+ GS  GV+ L+  GA V  H                     P +     G    T L+L + L+ ++G G RK G  L EV R L +A +  ERA+E+RE++ER
Sbjct:  394 LFAACREGALEEARALLQGGAEGATVAEREHEGGKSGPSLLHACVTTEALRKEGGDXXXXXXXAGRLEIAKLLLAWEASAAAVDVACVDEDGLTVLHRAAEACDVPLLRALLADRGESQRPAVTPQILLNERCLARGWTPLHYAASRGSTEGVTVLLGKGAPVGAHAA-------------------PPKAPSDKGA---TPLDLVKQLVQRQGGGRRKGGGSLTEVERVLRSALKEAERAREEREQRER 621          
BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: A0A7S1UAS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAS6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.160e-10
Identity = 68/221 (30.77%), Postives = 97/221 (43.89%), Query Frame = 0
Query:  287 RKEEDERRVDIFSACRGGEVEVVRMML----------------ETGLVRCTEREKENGQSGASLLHACVT-NFAGCREHTAELKALA-------------------IDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLE----------------ERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIH 455
            R+ E+  R  +FSA R G+V +V+ +L                E   +R +ERE+E G+SGA+LLHACV+ N        A L   A                    +R  +AA +L      +D G  D  G TVLH  S A D  +L LLL+                +++K+      + +N +CL +GWT LHY+ A G       L+ AGA V I 
Sbjct:  139 REREEAARAYLFSAARAGDVGLVQKILDPLAATASAASADYADELLSLRPSERERERGKSGATLLHACVSVNLPSAGAANAVLPKAAQXXXXXXVGGSSGKAVNRPAERRKVAAFLLT--QEELDVGAYDEDGCTVLHRAS-ASDPLFLQLLLKTVLGVQIGDDGEASKTKKKKASAAHAALDLNNKCLSRGWTALHYSVAAGLAGNCRLLLAAGARVRIR 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMX5_ECTSI5.390e-14256.25Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A6H5K1P9_9PHAE3.920e-9951.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBZ1_9STRA1.760e-2940.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UAS6_9STRA7.160e-1030.77Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 511..541
NoneNo IPR availableCOILSCoilCoilcoord: 219..239
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 425..454
e-value: 0.0044
score: 26.2
coord: 292..322
e-value: 870.0
score: 5.4
coord: 382..412
e-value: 3200.0
score: 1.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 425..457
score: 9.938
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 283..458
e-value: 3.2E-13
score: 51.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 298..453
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 382..457
score: 10.445

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5896contigH-elongata_contig5896:2807..11185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5896.13399.1mRNA_H-elongata_contig5896.13399.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5896 2807..11215 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5896.13399.1 ID=prot_H-elongata_contig5896.13399.1|Name=mRNA_H-elongata_contig5896.13399.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=541bp
MRAFMSMFMELVGMFGSEMPNGCNPGCKGGHVHFPSNISEDMADMPSATV
ALSKMFGDRGQEETWSTEDDEDDPEGQEEEDYDHDEEEFDLDEGERFTLG
YGDPGVHGYGGGNGNTDFCGDCGDVGNTAAATAAAAAAAASAAAAVAAGS
VAETATSGDIPYKTVSGVGAPSSECLWEPMVSRYFHMNLKEEAEQQRVAG
MVAAGFMSGETLELGAEALRQARALKKRQDKKRRQKEKRQRDSAARLQET
GNRECQAESKHVEDTTAEIDPSFSAAAKRKESARLKRKEEDERRVDIFSA
CRGGEVEVVRMMLETGLVRCTEREKENGQSGASLLHACVTNFAGCREHTA
ELKALAIDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLT
LLLEERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGA
NVTIHGPVLGGVRVNGGGGGGGRVFDPSRIDGGGGMEAGTALELARALLS
KEGPGPRKKGLQEVGRQLSAATQAVERAKEQRERKEREAKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom