mRNA_H-elongata_contig5896.13399.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5896.13399.1
Unique NamemRNA_H-elongata_contig5896.13399.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: D8LMX5_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX5_ECTSI)

HSP 1 Score: 465 bits (1197), Expect = 5.370e-150
Identity = 315/554 (56.86%), Postives = 358/554 (64.62%), Query Frame = 1 
Query:    1 SDRFYDDVDEMRAFMSMFMELVGMFGSE---MPNGCNPGCKGGHVHFPSNISEDMADMPSATVALSKMFGDRGQEETWSTEDDEDDPEXXXXXXXXXXXXXXXXDEGERFTLGYGDPGVHGYGGGNGNTDFCGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVAETATSGDIPYKTVSGVGAPSS---ECLWEPMVSRYFHMNLKEEAEQQRVAGMVAAGFMSGETLELGAEALRQARALKKRQDXXXXXXXXXXRDSAARLQETGNRECQAESKHVEDTTAEIDPSFSAAAKRKESARLKRKEEDERRVDIFSACRGGEVEVVRMMLETGLVRCTEREKENGQSGASLLHACVTNFAGCREHTAELKALAIDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLEERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIHGPVLGGVRVNGGXXXXGRVFDPSRIDGGGGME------AGTALELARALLSKEGPGPRKKGLQEVGRQLSAATQAVERAKEQR 1626
            S+RFYDDVDEMRAFMSMFMELVGMFGS+   MPNGC PGCKGGHV  P  +  DMADMPSA+VA S MFG+R QEETWS+E+++                                                          XXXXXXXXXXXXXXXXXX  + AE   +G       +G G P++   ECLWEPMV  YFHMNLKEE EQQR AG+  A   + E ++L  EALRQARALKKR  XXXXXXXXXX                                 S A KRKE  RLKRK E+ERRV +F+ACR G VE VR+ML TGL+RCTERE+ENG SGASLLH+CVT+FAG  ++  +LK LAIDRLSIAAM+L    PAVDAG VDS GLTVLH V++ALDLPYL LLLEERQKSQ+RRDQIL++ERCLLKGWTPLHY AAEGSP GVS L+TAGA+V++ G VL G+             +PS  +G            GTAL+LARALLSKEG GPRKKGLQEV RQLSAATQAVERAKEQR
Sbjct:   70 SERFYDDVDEMRAFMSMFMELVGMFGSDIPSMPNGCGPGCKGGHVQMPPGMPPDMADMPSASVAFSMMFGERPQEETWSSEEED---------------------------------------------------------GXXXXXXXXXXXXXXXXXXAAAAAEAFKAG------AAGAGGPAAAGGECLWEPMVRHYFHMNLKEEVEQQRAAGLGGASGGTSEAVQLEDEALRQARALKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXDTSVADKRKEVVRLKRKAEEERRVGLFTACRAGFVEEVRLMLGTGLIRCTERERENGSSGASLLHSCVTDFAGSPDNAPQLKELAIDRLSIAAMILASTDPAVDAGWVDSVGLTVLHRVAEALDLPYLALLLEERQKSQERRDQILLDERCLLKGWTPLHYAAAEGSPVGVSTLLTAGASVSVRGAVLDGI-------------EPSSSNGAXXXXXXXXXXGGTALQLARALLSKEGAGPRKKGLQEVARQLSAATQAVERAKEQR 541
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BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: A0A6H5K1P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P9_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 1.640e-106
Identity = 288/551 (52.27%), Postives = 329/551 (59.71%), Query Frame = 1 
Query:    1 SDRFYDDVDEMRAFMSMFMELVGMFGSE---MPNGCNPGCKGGHVHFPSNISEDMADMPSATVALSKMFGDRGQEETWSTEDDEDDPEXXXXXXXXXXXXXXXXDEGERFTLGYGDPGVHGYGGGNGNTDFCGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVAETATSGDIPYKTVSGVGAPSSECLWEPMVSRYFHMNLKEEAEQQRVAGMVAAGFMSGETLELGAEALRQARALKKRQDXXXXXXXXXXRDSAARLQETGNRECQAESKHVEDTTAEIDPSFSAAAKRKESARLKRKEEDERRVDIFSACRGGEVEVVRMMLETGLVRCTEREKENGQSGASLLHACVTNFAGCREHTAELKALAIDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLEERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIHGPVLGGVRVNGGXXXXGRVFDPSRIDGGGGME------AGTALELARALLSKEGPGPRKKGLQEVGRQLSAATQAVERAKEQR 1626
            S+RFYDDVDEMRAFMSMFMELVGMFGS+   MPNGC PGCKGGHV  PS +  D+ADMPSA+VA S MFG+R QEETWS+E++E +      XXXXXXXXXXXX                         D CG+   XXXXXXXXXXXXXXXXXXXXXXXX                  G      ECLWEPMV  YFHMNLKEE EQQR AG+      + E ++L  EALRQARA      XXXXXXXXXX            R+ Q +    ++ T       S A KRKE  RLKRK E+ERRV +F+ACR G VE VR+ML TGL+RCTERE+ENG SGASLLH+CVT+FAG  ++  +LK LA+DRLSIAA++LD                                                   ERCLLKGWTPLHY AAEGSP  VS L+ AGA+V++ G VL G+             +PS  +G            GTAL+LARALLSKEG GPRKKGLQEV RQLSAATQAVERAKEQR
Sbjct:   70 SERFYDDVDEMRAFMSMFMELVGMFGSDIPSMPNGCGPGCKGGHVQMPSGMPPDIADMPSASVAFSMMFGERPQEETWSSEEEEGEGIEKYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAQRGDGCGEAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXGPAEAGGECLWEPMVRHYFHMNLKEEVEQQRAAGLGGTSGGTSEAVQLEEEALRQARAXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDAQQDEGKKDEET-------SVADKRKEVVRLKRKAEEERRVGLFTACRAGFVEEVRLMLGTGLIRCTERERENGTSGASLLHSCVTDFAGSPDNAPQLKELAVDRLSIAAILLD---------------------------------------------------ERCLLKGWTPLHYAAAEGSPVCVSTLLAAGASVSVRGAVLDGI-------------EPSSSNGAXXXXXXXXXXGGTALQLARALLSKEGAGPRKKGLQEVARQLSAATQAVERAKEQR 540
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BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: A0A836CBZ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.010e-29
Identity = 102/250 (40.80%), Postives = 135/250 (54.00%), Query Frame = 1 
Query:  919 IFSACRGGEVEVVRMMLETGLVRCT--EREKENGQSGASLLHACVTNFAGCREH-TAELKALAIDRLSIAAMVL--DCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLEERQKSQDRR--DQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIHGPVLGGVRVNGGXXXXGRVFDPSRIDGGGGMEAGTALELARALLSKEGPGPRKKG--LQEVGRQLSAATQAVERAKEQRERKER 1641
            +F+ACR G +E  R +L+ G    T  ERE E G+SG SLLHACVT  A  +E            RL IA ++L  +  + AVD   VD  GLTVLH  ++A D+P L  LL +R +SQ      QIL+NERCL +GWTPLHY A+ GS  GV+ L+  GA V  H                     P +     G    T L+L + L+ ++G G RK G  L EV R L +A +  ERA+E+RE++ER
Sbjct:  394 LFAACREGALEEARALLQGGAEGATVAEREHEGGKSGPSLLHACVTTEALRKEGGDXXXXXXXAGRLEIAKLLLAWEASAAAVDVACVDEDGLTVLHRAAEACDVPLLRALLADRGESQRPAVTPQILLNERCLARGWTPLHYAASRGSTEGVTVLLGKGAPVGAHAA-------------------PPKAPSDKGA---TPLDLVKQLVQRQGGGRRKGGGSLTEVERVLRSALKEAERAREEREQRER 621
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BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: A0A7S1UAS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAS6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.440e-10
Identity = 68/221 (30.77%), Postives = 97/221 (43.89%), Query Frame = 1 
Query:  889 RKEEDERRVDIFSACRGGEVEVVRMML----------------ETGLVRCTEREKENGQSGASLLHACVT-NFAGCREHTAELKALA-------------------IDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLTLLLE----------------ERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGANVTIH 1395
            R+ E+  R  +FSA R G+V +V+ +L                E   +R +ERE+E G+SGA+LLHACV+ N        A L   A                    +R  +AA +L      +D G  D  G TVLH  S A D  +L LLL+                +++K+      + +N +CL +GWT LHY+ A G       L+ AGA V I 
Sbjct:  139 REREEAARAYLFSAARAGDVGLVQKILDPLAATASAASADYADELLSLRPSERERERGKSGATLLHACVSVNLPSAGAANAVLPKAAQXXXXXXVGGSSGKAVNRPAERRKVAAFLLT--QEELDVGAYDEDGCTVLHRAS-ASDPLFLQLLLKTVLGVQIGDDGEASKTKKKKASAAHAALDLNNKCLSRGWTALHYSVAAGLAGNCRLLLAAGARVRIR 356
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BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Match: A0A7S1U9Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Q7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.060e-6
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 1 
Query:    1 SDRFYDDVDEMRAFMSMFMELVGMFGSEMPNGCNPGCKGGHVHFPSNIS-EDMADMPSATVALSKMFG-DRGQEETWSTED 237
            SDR+Y+DVDEMRAFM+MFM+LVG+FG     G  PG        P  IS ED+  M    +A   MFG   G    W +ED
Sbjct:   76 SDRYYNDVDEMRAFMNMFMDLVGVFGDGRGMGGPPGPGAPGDFMPGEISFEDIDGMHG--MAFHMMFGGSMGGPGEWDSED 154
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5896.13399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMX5_ECTSI5.370e-15056.86Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A6H5K1P9_9PHAE1.640e-10652.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBZ1_9STRA2.010e-2940.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UAS6_9STRA7.440e-1030.77Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1U9Q7_9STRA2.060e-646.91Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5896contigH-elongata_contig5896:2807..11215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.8
Seed ortholog evalue1.4e-122
Seed eggNOG ortholog2880.D8LMX5
EggNOG free text desc.protein folding
EggNOG OGsCOG0484@1,KOG0714@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHeat shock protein 40 like protein/ DnaJ domain containing protein
Ec32 orthologEc-02_004010.1
Exons10
Model size1654
Cds size1623
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930956.2251198-CDS-H-elongata_contig5896:2806..31981622930956.2251198-CDS-H-elongata_contig5896:2806..3198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 2807..3198 -
1691679639.7630842-CDS-H-elongata_contig5896:2806..31981691679639.7630842-CDS-H-elongata_contig5896:2806..3198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 2807..3198 -
1622930956.2469814-CDS-H-elongata_contig5896:3817..39561622930956.2469814-CDS-H-elongata_contig5896:3817..3956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 3818..3956 -
1691679639.7772903-CDS-H-elongata_contig5896:3817..39561691679639.7772903-CDS-H-elongata_contig5896:3817..3956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 3818..3956 -
1622930956.2671678-CDS-H-elongata_contig5896:5385..55531622930956.2671678-CDS-H-elongata_contig5896:5385..5553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 5386..5553 -
1691679639.785652-CDS-H-elongata_contig5896:5385..55531691679639.785652-CDS-H-elongata_contig5896:5385..5553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 5386..5553 -
1622930956.29443-CDS-H-elongata_contig5896:7163..73131622930956.29443-CDS-H-elongata_contig5896:7163..7313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 7164..7313 -
1691679639.8034728-CDS-H-elongata_contig5896:7163..73131691679639.8034728-CDS-H-elongata_contig5896:7163..7313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 7164..7313 -
1622930956.316464-CDS-H-elongata_contig5896:7634..77571622930956.316464-CDS-H-elongata_contig5896:7634..7757Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 7635..7757 -
1691679639.8180926-CDS-H-elongata_contig5896:7634..77571691679639.8180926-CDS-H-elongata_contig5896:7634..7757Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 7635..7757 -
1622930956.3307998-CDS-H-elongata_contig5896:9011..90921622930956.3307998-CDS-H-elongata_contig5896:9011..9092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 9012..9092 -
1691679639.8373396-CDS-H-elongata_contig5896:9011..90921691679639.8373396-CDS-H-elongata_contig5896:9011..9092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 9012..9092 -
1622930956.3517072-CDS-H-elongata_contig5896:9566..98291622930956.3517072-CDS-H-elongata_contig5896:9566..9829Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 9567..9829 -
1691679639.8505821-CDS-H-elongata_contig5896:9566..98291691679639.8505821-CDS-H-elongata_contig5896:9566..9829Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 9567..9829 -
1622930956.5477195-CDS-H-elongata_contig5896:10184..103021622930956.5477195-CDS-H-elongata_contig5896:10184..10302Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 10185..10302 -
1691679639.8617887-CDS-H-elongata_contig5896:10184..103021691679639.8617887-CDS-H-elongata_contig5896:10184..10302Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 10185..10302 -
1622930956.5692656-CDS-H-elongata_contig5896:10676..107561622930956.5692656-CDS-H-elongata_contig5896:10676..10756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 10677..10756 -
1691679639.873519-CDS-H-elongata_contig5896:10676..107561691679639.873519-CDS-H-elongata_contig5896:10676..10756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 10677..10756 -
1622930956.6120274-CDS-H-elongata_contig5896:11076..111851622930956.6120274-CDS-H-elongata_contig5896:11076..11185Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 11077..11185 -
1691679639.88223-CDS-H-elongata_contig5896:11076..111851691679639.88223-CDS-H-elongata_contig5896:11076..11185Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5896 11077..11185 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930956.634032-UTR-H-elongata_contig5896:11185..112151622930956.634032-UTR-H-elongata_contig5896:11185..11215Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5896 11186..11215 -
1691679639.8907952-UTR-H-elongata_contig5896:11185..112151691679639.8907952-UTR-H-elongata_contig5896:11185..11215Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5896 11186..11215 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5896.13399.1prot_H-elongata_contig5896.13399.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5896 2807..11185 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5896.13399.1

>prot_H-elongata_contig5896.13399.1 ID=prot_H-elongata_contig5896.13399.1|Name=mRNA_H-elongata_contig5896.13399.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=541bp
MRAFMSMFMELVGMFGSEMPNGCNPGCKGGHVHFPSNISEDMADMPSATV
ALSKMFGDRGQEETWSTEDDEDDPEGQEEEDYDHDEEEFDLDEGERFTLG
YGDPGVHGYGGGNGNTDFCGDCGDVGNTAAATAAAAAAAASAAAAVAAGS
VAETATSGDIPYKTVSGVGAPSSECLWEPMVSRYFHMNLKEEAEQQRVAG
MVAAGFMSGETLELGAEALRQARALKKRQDKKRRQKEKRQRDSAARLQET
GNRECQAESKHVEDTTAEIDPSFSAAAKRKESARLKRKEEDERRVDIFSA
CRGGEVEVVRMMLETGLVRCTEREKENGQSGASLLHACVTNFAGCREHTA
ELKALAIDRLSIAAMVLDCVSPAVDAGVVDSAGLTVLHAVSKALDLPYLT
LLLEERQKSQDRRDQILVNERCLLKGWTPLHYTAAEGSPAGVSALVTAGA
NVTIHGPVLGGVRVNGGGGGGGRVFDPSRIDGGGGMEAGTALELARALLS
KEGPGPRKKGLQEVGRQLSAATQAVERAKEQRERKEREAKA
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mRNA from alignment at H-elongata_contig5896:2807..11215-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5896.13399.1 ID=mRNA_H-elongata_contig5896.13399.1|Name=mRNA_H-elongata_contig5896.13399.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8409bp|location=Sequence derived from alignment at H-elongata_contig5896:2807..11215- (Himanthalia elongata Himel1 dioecious)
AGCGATCGGTTCTACGATGATGTGGATGAGATGCGTGCCTTCATGTCAAT
GTTTATGGAGCTGGTGGGCATGTTCGGGAGCGAAATGCCCAACGGCTGCA
ATCCCGGCTGCAAGGGGGGGCACGTGCATTTCCCATCGAGTGAGCGACGT
CCTGAGCGAGAAACGGGGTAAAGCTCGAAGCACAAAAGAAGGGTTGTTGG
GAAGTTTAAGAAGGGGGAGGAAGGCAGGGAAATATGTGGAGGTGAAAGGT
GGATCAAATCAGCGGGTAACATTTATCCGAGCTGGATTGGTGGAATGCCC
CAACCGAAACGGCACGAAGATGTGTTGCACTGCCGCACGCGTCTGAAGTT
CGAGGCGTGTATGTCCTCGTCCTTTTTTTGTCACCGTGGAGAGCAACCCG
CGACTGCGCGCGTGGTGCATTTTTTCTCGTGTCGGCGTCTTTACTCCCAT
GCGCCCCAGATATTTCGGAAGATATGGCCGATATGCCCAGCGCTACCGTT
GCCTTAAGCAAAATGTTTGGCGATAGGGGACAAGAAGAGGTGAGATAACG
TTCTCGGGGCCTTGGCGATTAGACAGTCTGCGTCGATGGTCAGGTCAGCC
AGCAACGCGCTCGTCTCGAGTGTTGCATTGGCCTCGTGGAAAACAAGGAT
GACAGTGGAAGAGAGAGAGAGAGCGCGCGCACGCGGGGGGGTGTGATGAA
GATTTGACCCCGCCAGCACCAACTTGCCAGGTTTTGTTTTAGAAAAGCCA
GAATGCATCTTGGACGATGATCCCCTCGGCAATCTAGGCGCTCTAATTTT
TCAGCCAAGGAGAGGCTCTCGGTGAGGGCAGGCGTTGGGATACGACCTTC
AACCTTCTCGTGCTCCTCTTGCTGCTGCTGCTGCTGCTACTGCCCCTTCT
CCTACACTGGCAGACATGGAGTACCGAGGATGATGAAGACGACCCCGAGG
GTCAGGAAGAGGAGGACTATGACCACGACGAAGAGGAATTCGACTTAGAC
GAAGGTGAGCGGTTCACTTTAGGCTATGGTGGTGTATCGTGTGTATATCG
ATCTGTCTCTCTTTGCCCTTACGCGCGCTCTATTTTTTTTAGCGCAAAAT
GTTGAAAGAAACGATTGGAGAGAGAGAGAGATGCTTAAGAGAAAGAGAGA
AAGCCTAGAACGTGCCCGAGTCGGGATTTTCTTTCTTCTCTACTTTTTTT
TTTTTTTTAATCTCTTCCTCGTCGCGTGGGGAATAAATTCCGTTACGGTT
GTGCACTCTCGCGTTAAGGGCGGTAAAGGTCGTTTCGTGATGCTGACGGA
CCCGCTCGCTCTCTCTCTCTCTCTTCTTCATGTTCATACACCCAAGTATT
CTATTCCCTGTCTGGCGTGCATCTCGAACCCCGTAGATCCCGGCGTTCAC
GGGTACGGGGGTGGGAATGGCAACACAGATTTTTGTGGCGATTGTGGTGA
TGTCGGGAACACGGCGGCAGCAACAGCAGCGGCGGCTGCAGCGGCGGCGT
CGGCGGCCGCTGCCGTTGCTGCTGGATCGGTAGCGGAGACGGCGACGAGC
GGGGATATACCTTACAAGACAGTGAGCGGTGTGGGGGCTCCCAGCAGCGA
GTGCTTGTGGGAGCCCATGGTCTCACGCTATTTCCACATGAATCTCAAGG
TGAAAAGAGAAAGGATCAGGTTTTGCGTGTTCGTGGCCTCTTTTGAAAAC
GTGGGTATGTTCCGTGTTCAGTCGGCGGCGGCGCTGCCTTGGTAGCGATC
AACGCTACGAGCAATTACTCGACAATGCTTCTTAAACCGTCATCGAGTTA
TAGAGGCTCGTTCGGCGGGGGAGGATGTCTCATGAACAAACGTTTGCTGC
AAGCACTGGTTATAGAGAAACCACACGCTAAGAGTCTCGAGCGCCTCGCG
TGCAACGGCTGTGGTAACGTTCTTTGTTTTGTTCTGTCGGGGTTTTTTTT
TTATCTTCATGTCCCGCCTGCGTGAACGGGTCGGCGGTAAACGCCGTATC
CCCCACTCCTGTGGCTTCCGTTTTTTTTGTTTTGTTTTCCAAAACGCTGC
CGATCCACAATGTTTAAAAATTACGTTGCTTCGTGGTGTGATCCTTGGAC
CACCATGCGTCGGGAATGAAAAGGAGGAGGCAGAGCAACAAAGAGTGGCT
GGAATGGTCGCCGCTGGCTTCATGTCGGGCGAAACGCTGGAGCTGGGAGC
GGAGGTGACGATATTCGAGGCGTGAAGCCCACGATCGGGCGTGAGAACGC
AAACGTTCTGCTTTGATAGGTGTTTTGGGTATGCTGGCTATACTTTTTGG
CAACTGATTGCGGGCGGGGGTGCTAGGGTCCCATATGAGGTGTGGGGTTG
TGGGGGGGGAGGAGGTTTGGAGTTCCACTATACATTTCACGAGGCATGTT
TTTGTTTTGTTTTTTCCCTTCCCCTCCTTATGGCGCTTATCGTGCAATCC
ATTGTATGTATGTATGCATGCATGCATGCATGCATGCACGAACCAAGCAT
GTACCGGAAGGACATCTTGTCGGCAGGGGAGGTGGGGGGGGGGGCATGGG
ATGTCCCCTAACGCCAGGCTTTCTTGGGGGGTAGACCAGAGGCCTCGTCG
CCCTTCCTATACCATCATCAGTCGCGACTATTCAATAGTACTATTAATAG
TAGTCCCTTATTTTGTTTTTGTTTTCCGCATTCTCGATGGCGTAACGTCA
TCGCCAAGTAGTCGGCTAACTTAAAGCCGAAGCTCCATGAAAAGGCGATA
AAGTGTGCTTGGATTAATTTTGATGTTGATTTTGGTGTGCGAACGTGAGC
CCGTGAAAGTCGAACATTCTAGTGAAAGTGAACAAGTGAACACGCGAGCT
GGTAAGGCGAAGGCCGTATCGACCCCGACCCCGACCGTGACGTTGGTTCG
TTTTATTTAGTGTATGTGTATGTGTATATATGTATGTGTGTTTATTAAAT
TGCACATGACCGTGCAATCCCACCCTGTCATGCTAGTCACTCTAGGCTAC
ACACACACACACACACTCATGTGTGTGTGTGTGTGTGTGTATTTATTAAA
TTAAACATAACCGCGCTATCCGGCTCTGTCATGCTAGCTCTTCTGGGCTA
CTTTCTCTCGCATTGATCCTCCCAATGGGAGATTACTACAAAAACCTCTC
ATCAGACGTGACAAAGGAGACATATACTATCATCGCTACATTTCGTATCT
AAACTATCAATACCTTGCGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTG
TTTGTGTATTTATTAAATTGCACATAACCGCGCACTCCGACCCTGTTGTT
CTAGTTATTCTATGCCACTCGTATTGATCCTCCTAGTGTGTGTGTGTGTG
TGTGTTGAGTTAAGATAAGAGTGCTCATTCCGCGCGCAACACCTCGTCCT
AACAAATAACGTTATAGATGGTGGTGGGCGTATTTTGTCGTGCGTTGTTG
GTCGACAGGCGTTGCGGCAAGCTCGAGCTCTCAAGAAGCGCCAAGACAAA
AAGCGGAGACAGAAAGAGAAGAGGCAGAGGGATTCGGCCGCGAGGCTGCA
AGAGACGGGAAATCGAGAATGCCAGGCCGAGGTGTCAATGCGGAGGAGTG
GTGGGGGGGGGGAGGGGGCGTAAGTAGGAGTACGCGCATATTTTTTTTGT
CTTTTCGGAGCGCGTGCTCTTCTGCAGCCCTAAAAGAACACGGCGTTTTC
AGGGTATACCCGCGGTGGTAACTGGTAACTGATAACTACTGAAGCAGTAC
AGTGCTAGAGCAAGAACAAGTGTGTTTGATTCGGGCATGCTTCCGATGAG
AACAGTCGTGGTAGGGTAATGACGAAACCTGCGCGGCTTTTTTGCCACCG
TCTCCGCCTTCGCCTCCTACTCGTCCTCGCTCTCCTATGTCGCTTGCGGC
AGTCCAAGCATGTGGAGGACACCACCGCTGAAATCGACCCTAGTTTTTCC
GCAGCGGCGAAACGAAAGGAGAGCGCCCGCTTGAAGAGAAAGGAGGAGGA
CGAGCGGCGGGTGGACATATTTTCCGCCTGCAGGGGGGGCGAGGTCGAGG
TGGTGAGAAAGAGAGAGAGAGAGAAAGAGACGGAAGGGGTTGCGCGCGGT
GACCCGCCATTCAGTTCCCCAGGAGCGTGTCGGTGGCATCTCCAAAGCGA
GGATGGGGGTTGTATTGTATTGGTGTTGGTGTTGTCCAATCGCATCCCGG
CCAGGCTGATTTTTGAGGGCTAGAGGCGACGCAGTGTTTTACGGTTGCCT
TTGGCTCTTGCTGTGGTCTGATTGTGCCGTTAACCCTTTTCAAATCACGG
TTCGATATCGCGGGATCATCGTGTATCTTTTTTGTTTTGTTTTTGTGGCC
CCTTGACCCTTGAAACGGTGTCGAACTTGGCCTATTAGAATATATTGTAG
AGATAAAAGTATGGTTTACCCAACAAGGTATGTACGCAGAACTGTCTTTT
ACATCCTTAACCCCTATGGAACTCGATCTGTTTCTTTACATACTAAATTC
AATATAAAACTTGAAATCCGGTTTCCGAAGGTGACGATGTAAACAATGAT
TAAACAGTCACATGTATAGTATGTTTACTGAAACAATATCGAAAATATAT
ACAGTCACCTTGTATCCATTCTTTATATTGCAGTATTTCATCATACTCTT
CCCAGCACCTTGGCAGCTTATTACTACTATACCTCTATAATCCTCACTAC
CCCACAAAACAATAATTCAAAACAATGTCCTACTTAACTGTAACTACTAA
ATACTAATAGTAATAGTGTTTATATTTTTCTTTAGAACTTGTGTTGGCGT
CCTTACCGTGTTTGTTGACTATTTTCACTGTCACTATCATCTCCTTGGTA
GACTCCCGAGCATACCGGTTAACTGTGTGATCTATGACCCTCTTAACTCT
TTTTATTTCTTCCCTTTAGTTAACAATAATCTAAAAAATGTTGCTACTGA
AAAATCTCCTCTAGGTAGGCCACGATTTTGTGCTCAAAGGTAGTAATGTA
CACATTCGAACCCGACGATAGTTGGTCCCCTGACTGTACCTCTCACGGCG
CTAAGAAGGTGTGGATGTTCGGAAGGTTGGAATGATTTCATACGATGTAT
GTTTTTTAATAATAATATGCTTCCAGAAAGGAATTGAAGTTTTATCCGAA
ATCAATCGAGATATATGTACAATGCAACCATGTGCTAAACATGCTAAACC
CTTCCCAACCACCACAGTTCACCGTCTAGGCTCTGGTTTGGCGTCCCCAT
ATTATAATGAAAATGCAAGTGTATGGGATAATGACGGGATCCACGATATT
ACACCGTTGACCCGATAAATCTACTGTTATTGGGAAACACGATTAACCAA
TCACATGTGACGATTTTGTCCTCGTAGGTCGTAATATGCGAGACTGTAAA
CACACTCGAATAGTTGGATAGTTGGTCCGCTGGGCTTTTCCATATCTCAT
GGTGTTTGAATAAGTTTTCATATTGTTAAACAGGCGGGAGTTGCAAAGGC
GTTGGCTTGCTTGCGTTCTTTCCTTCCCAACATATATATATACATACATA
CACACCACCGGAGAGAGAAATATACTGTTGCGTTGCGTGCGCTTGTGACA
TAGGCATCGCTGCCTTATCCTGTCCTGTCCTGTCCTTCGTTGGGGTGGGG
TGGGGGGTGAAGGTGCGAATGATGCTCGAGACGGGGCTGGTCCGCTGCAC
GGAGAGGGAGAAGGAGAACGGACAGTCGGGAGCGTCGCTGTTGCATGCGT
GCGTGACCAATTTTGCCGGGTGCCGCGAGCACACGGCCGAGCTCAAGGCC
CTCGCAATAGACCGTCTGAGCATCGCGGCGGTGAGCGCGACTGTAACATT
TAAATGAGAGTGTACATACTTTGCGCACGAGTGATTTTTTTTTTTTTTTT
TTTTTATTTAGAGGTAAAAAGAAGTAAAAAAATGCTCTTCTTCTCATGGT
GGTTTNNNNNNNNNNGCGTGACTTGGTGGGCGGGGCCGGAGCATTTAAGG
GGGAGTGTACGGAATTTGCCCACGAGTGAGTTTTTTTTTTTTTCTGTGGA
GGAAGGGGAGGGAAGAGGGAAGAGTATGCTCCTCCTATCCGTGGCGGTGA
CGCTGTGTGTCCATTGCTCGGCGTTGACGCTGTATGGGGGGCTATTAACA
TACATACAGCAGAAGATATACTAATTGCGTATAAAAAATATTAACATAAG
ACCTTGGGGATGACAGCGGAGGGCGGAGGGGAAAGGGAGAATGGTGAACT
CGCATTATGCATGACAAGGAAGGAGGAAATACGTTGGCGAGATATTTCTC
GTAATATTTATATAAATATATATTTAAAGTCAAAAGTGGTATACAAGACA
CGCCTACAACCTTACAACCAACTCCCTGGGAAAACGTTTGGGGGGTGAGG
GGAAAGCAAAAAAAGCGAGAAAGCGTCCGTGTCACCAACAGACAGACGGG
CGGACGGTACACGTGCCACCCGAGACGATCCCGGCGATGTGCGCATGTCT
AACCTTTCATCCATGTCGCTATATAATTCAGCCAGCCTCCGCCCGGCGCT
AAAGGGAATAAAAATAACTTGTTCTTCGTTTTGTTCTGCGTGCGTGTACG
CAATCCATCATTGGCCATCCCTATACCTATACTGTCATAGTCATGTTACT
GTATTGATTATTAATAGTCATTTTAGGCTACTCGTGTTGGTCCCTCTCAA
ATCGAGGGATCAATTTTATTTGTAACGGAAACCTATCGTAGACATCAGGC
GCGTCTTTCTGCGCGCGCGCGCGTGTGTCTGTGTGTGTCTGTGTCTGTGT
GTGTGTTTAATACATTGCATAACCGCGCAATCCGACTCTCTCTGTCATGC
TAGCTCTTCTAGGCTACTCTCGCATTGATCCTCCTCCCAATGTATATGTA
TGTGTGTCTGTGTGTCAGATACTTTCTATTAATGGTATAGTATAGTATAG
TACAGTATATTATAGTATAGTATAGAGTATAGTATAGTATAGTACAGTAT
ATTATAGTATATTATAGTAGTATAGTATAGTATAGTATAGTATGCGCGGT
TGCCAATCCGGTACTGTCGGTTCGTGGTCAAAAGTTGAAAAGAAAATAAT
GTAAAAAACGGGATAAAAAAACGTTAGCAAGAAGTTAACAAAAACGTTAA
TTTGTATTGATATTGATATTGATATTGATTAGCTGACAAGTGACGATTGA
CGATGATGACGACTGTGTCCAATTTGCCTCGCTCTCTCCTTTCCAACGCC
CGCGCGAAGATGGTGCTGGATTGTGTCAGCCCCGCGGTGGACGCCGGTGT
CGTAGACTCGGCCGGGCTGACCGTGCTTCACGCGGTCTCTAAGGCCCTCG
ATCTCCCGTATCTGACCCTGCTACTCGAGGAGAGGCAAAAGTCTCAAGGT
GCGCATTTCTTTTCGTACTGGTTCCGCCCTTCCCCCTCCCAATTATCATT
ATATAATTAGGGTATAAGTCGTTCTATCATTAAGTTATTAATATTATATC
ATTAAATCATTGGATCGTTATATATATATATATATATATAGGATCATGAA
ATCGCTTTATCGTTATATATTATATATATATATATATATATGTACTGAAA
TCGTTATATTGTTGTATCATTAGATCATTACAGTATTCGCTTGGGGGTCA
TGGTGACGGTTCATGGTGGGGAGGGGTTAGACGAGGATGCTGGGTCCGAT
TTTGCCGCGTCGAGTATTTTTTTCTGATCGCAGCAAGTAATGCGTCGTCT
CGTTTCGTCTCATATCATCTCATCTCGCTGTCCAATCGTTCGCCGTTCTT
CCCGAATACCTGTAGATCTTGCTTTCCCTAAAAACTAAAGAAATAATTAA
CAATTAAGGCCAGAAAATAAATACCAGAAAATATTTACCAGGTAAGTATA
GTATTGCATCCTTCCCCTCTCCCATCTCTATATCTCCCTATGTCTGGTTA
TCTCCCTGTGTCTGTGTCTCTCTCACGCCTTGGTCGTTCGATGGCACACT
TTCCTCTTCCTCCTCAGATCGACGGGACCAGATCCTCGTCAACGAGCGAT
GTCTCCTCAAAGGGTGGACCCCTCTCCACTACACAGCGGCGGAGGGCAGT
CCCGCGGGGGTGTCGGCGCTCGTGACGGCCGGTGCCAACGTGACCATCCA
CGGTCCAGTCCTCGGTGGCGTCAGGGTCAACGGAGGCGGCGGCGGCGGTG
GAAGAGTCTTCGACCCCAGCCGGATAGATGGAGGAGGCGGCATGGAGGCG
GGGACGGCCCTGGAGCTCGCCCGGGCTCTGCTGTCCAAGGAGGGCCCCGG
GCCACGGAAGAAGGGGCTGCAGGAAGTTGGTCGGCAGCTAAGCGCGGCAA
CTCAGGCCGTGGAAAGGGCGAAGGAGCAGCGGGAGCGCAAGGAGCGCGAG
GCGAAGGCA
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Coding sequence (CDS) from alignment at H-elongata_contig5896:2807..11215-

>mRNA_H-elongata_contig5896.13399.1 ID=mRNA_H-elongata_contig5896.13399.1|Name=mRNA_H-elongata_contig5896.13399.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3246bp|location=Sequence derived from alignment at H-elongata_contig5896:2807..11215- (Himanthalia elongata Himel1 dioecious)
ATGCGTGCCTTCATGTCAATGTTTATGGAGCTGGTGGGCATGTTCGGGAG
CGAAATGCCCAACGGCTGCAATCCCGGCTGCAAGGGGGGGCACGTGCATT
TCCCATCGAATGCGTGCCTTCATGTCAATGTTTATGGAGCTGGTGGGCAT
GTTCGGGAGCGAAATGCCCAACGGCTGCAATCCCGGCTGCAAGGGGGGGC
ACGTGCATTTCCCATCGAATATTTCGGAAGATATGGCCGATATGCCCAGC
GCTACCGTTGCCTTAAGCAAAATGTTTGGCGATAGGGGACAAGAAGAGAT
ATTTCGGAAGATATGGCCGATATGCCCAGCGCTACCGTTGCCTTAAGCAA
AATGTTTGGCGATAGGGGACAAGAAGAGACATGGAGTACCGAGGATGATG
AAGACGACCCCGAGGGTCAGGAAGAGGAGGACTATGACCACGACGAAGAG
GAATTCGACTTAGACGAAGGTGAGCGGTTCACTTTAGGCTATGGTGACAT
GGAGTACCGAGGATGATGAAGACGACCCCGAGGGTCAGGAAGAGGAGGAC
TATGACCACGACGAAGAGGAATTCGACTTAGACGAAGGTGAGCGGTTCAC
TTTAGGCTATGGTGATCCCGGCGTTCACGGGTACGGGGGTGGGAATGGCA
ACACAGATTTTTGTGGCGATTGTGGTGATGTCGGGAACACGGCGGCAGCA
ACAGCAGCGGCGGCTGCAGCGGCGGCGTCGGCGGCCGCTGCCGTTGCTGC
TGGATCGGTAGCGGAGACGGCGACGAGCGGGGATATACCTTACAAGACAG
TGAGCGGTGTGGGGGCTCCCAGCAGCGAGTGCTTGTGGGAGCCCATGGTC
TCACGCTATTTCCACATGAATCTCAAGATCCCGGCGTTCACGGGTACGGG
GGTGGGAATGGCAACACAGATTTTTGTGGCGATTGTGGTGATGTCGGGAA
CACGGCGGCAGCAACAGCAGCGGCGGCTGCAGCGGCGGCGTCGGCGGCCG
CTGCCGTTGCTGCTGGATCGGTAGCGGAGACGGCGACGAGCGGGGATATA
CCTTACAAGACAGTGAGCGGTGTGGGGGCTCCCAGCAGCGAGTGCTTGTG
GGAGCCCATGGTCTCACGCTATTTCCACATGAATCTCAAGGAGGAGGCAG
AGCAACAAAGAGTGGCTGGAATGGTCGCCGCTGGCTTCATGTCGGGCGAA
ACGCTGGAGCTGGGAGCGGAGGAGGAGGCAGAGCAACAAAGAGTGGCTGG
AATGGTCGCCGCTGGCTTCATGTCGGGCGAAACGCTGGAGCTGGGAGCGG
AGGCGTTGCGGCAAGCTCGAGCTCTCAAGAAGCGCCAAGACAAAAAGCGG
AGACAGAAAGAGAAGAGGCAGAGGGATTCGGCCGCGAGGCTGCAAGAGAC
GGGAAATCGAGAATGCCAGGCCGAGGCGTTGCGGCAAGCTCGAGCTCTCA
AGAAGCGCCAAGACAAAAAGCGGAGACAGAAAGAGAAGAGGCAGAGGGAT
TCGGCCGCGAGGCTGCAAGAGACGGGAAATCGAGAATGCCAGGCCGAGTC
CAAGCATGTGGAGGACACCACCGCTGAAATCGACCCTAGTTTTTCCGCAG
CGGCGAAACGAAAGGAGAGCGCCCGCTTGAAGAGAAAGGAGGAGGACGAG
CGGCGGGTGGACATATTTTCCGCCTGCAGGGGGGGCGAGGTCGAGGTGTC
CAAGCATGTGGAGGACACCACCGCTGAAATCGACCCTAGTTTTTCCGCAG
CGGCGAAACGAAAGGAGAGCGCCCGCTTGAAGAGAAAGGAGGAGGACGAG
CGGCGGGTGGACATATTTTCCGCCTGCAGGGGGGGCGAGGTCGAGGTGGT
GCGAATGATGCTCGAGACGGGGCTGGTCCGCTGCACGGAGAGGGAGAAGG
AGAACGGACAGTCGGGAGCGTCGCTGTTGCATGCGTGCGTGACCAATTTT
GCCGGGTGCCGCGAGCACACGGCCGAGCTCAAGGCCCTCGCAATAGACCG
TCTGAGCATCGCGGCGGTGCGAATGATGCTCGAGACGGGGCTGGTCCGCT
GCACGGAGAGGGAGAAGGAGAACGGACAGTCGGGAGCGTCGCTGTTGCAT
GCGTGCGTGACCAATTTTGCCGGGTGCCGCGAGCACACGGCCGAGCTCAA
GGCCCTCGCAATAGACCGTCTGAGCATCGCGGCGATGGTGCTGGATTGTG
TCAGCCCCGCGGTGGACGCCGGTGTCGTAGACTCGGCCGGGCTGACCGTG
CTTCACGCGGTCTCTAAGGCCCTCGATCTCCCGTATCTGACCCTGCTACT
CGAGGAGAGGCAAAAGTCTCAAGATGGTGCTGGATTGTGTCAGCCCCGCG
GTGGACGCCGGTGTCGTAGACTCGGCCGGGCTGACCGTGCTTCACGCGGT
CTCTAAGGCCCTCGATCTCCCGTATCTGACCCTGCTACTCGAGGAGAGGC
AAAAGTCTCAAGATCGACGGGACCAGATCCTCGTCAACGAGCGATGTCTC
CTCAAAGGGTGGACCCCTCTCCACTACACAGCGGCGGAGGGCAGTCCCGC
GGGGGTGTCGGCGCTCGTGACGGCCGGTGCCAACGTGACCATCCACGGTC
CAGTCCTCGGTGGCGTCAGGGTCAACGGAGGCGGCGGCGGCGGTGGAAGA
GTCTTCGACCCCAGCCGGATAGATGGAGGAGGCGGCATGGAGGCGGGGAC
GGCCCTGGAGCTCGCCCGGGCTCTGCTGTCCAAGGAGGGCCCCGGGCCAC
GGAAGAAGGGGCTGCAGGAAGTTGGTCGGCAGCTAAGCGCGGCAACTCAG
GCCGTGGAAAGGGCGAAGGAGCAGCGGGAGCGCAAGGAGCGCGAGGCGAA
GGCAATCGACGGGACCAGATCCTCGTCAACGAGCGATGTCTCCTCAAAGG
GTGGACCCCTCTCCACTACACAGCGGCGGAGGGCAGTCCCGCGGGGGTGT
CGGCGCTCGTGACGGCCGGTGCCAACGTGACCATCCACGGTCCAGTCCTC
GGTGGCGTCAGGGTCAACGGAGGCGGCGGCGGCGGTGGAAGAGTCTTCGA
CCCCAGCCGGATAGATGGAGGAGGCGGCATGGAGGCGGGGACGGCCCTGG
AGCTCGCCCGGGCTCTGCTGTCCAAGGAGGGCCCCGGGCCACGGAAGAAG
GGGCTGCAGGAAGTTGGTCGGCAGCTAAGCGCGGCAACTCAGGCCGTGGA
AAGGGCGAAGGAGCAGCGGGAGCGCAAGGAGCGCGAGGCGAAGGCA
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