prot_H-elongata_contig58940.13396.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig58940.13396.1
Unique Name	prot_H-elongata_contig58940.13396.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	108

Homology

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.060e-27
Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 0

Query:   17 MYISFTIHVCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            M+ISFTIH  DG TLR IDLAC PF+  H+  NIA +LK IL   GL+P KC  ITMDNA+NMI+AG+ L+   + ++ R+SCFCH+IQL I
Sbjct:    1 MFISFTIHFVDGETLRTIDLACRPFNVTHSGENIAKELKSILTDAGLDPKKCTGITMDNASNMIRAGNQLDASDDNNILRLSCFCHSIQLSI 92

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A498M545_LABRO (Zinc finger BED domain-containing 1-like protein n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498M545_LABRO)

HSP 1 Score: 73.6 bits (179), Expect = 5.430e-13
Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 0

Query:    1 KFFGASTDIWTDRRGKMYISFTIH-VCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + Y+S T+H + +   L++  L  + F E+HTA NIA  L+  +   GL+ ++ V IT DNAANM+KA D+         TR+ CF H + L I
Sbjct:  172 EYYATTTDLWSSRTTEPYMSLTVHFITEDFELKSRCLQTAFFPESHTAENIAEALREAVSAWGLDETRQVCITTDNAANMVKAADLNK------WTRLQCFGHRLHLAI 274

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A6P8W1Z1_GYMAC (zinc finger BED domain-containing protein 1-like n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8W1Z1_GYMAC)

HSP 1 Score: 71.6 bits (174), Expect = 5.660e-13
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 0

Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS-TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + YIS T+H  D   TL++  L  + F E HT+ NIA  L+  +   GL+ ++ V IT DNAANM+KA   LN+      TR+ CF H + L +
Sbjct:   55 EYYAVTTDLWSSRTTEPYISLTVHFIDEDFTLKSRCLQTAFFPENHTSENIAAGLREAVAAWGLDETRQVCITTDNAANMVKAAS-LNE-----WTRLQCFGHRLHLAV 157

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI00146A3526 (zinc finger BED domain-containing protein 1-like n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146A3526)

HSP 1 Score: 71.2 bits (173), Expect = 3.330e-12
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 0

Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS-TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + YIS T+H  D   TL++  L  + F E HT+ NIA  L+  +   GL+ ++ V IT DNAANM+KA   LN+      TR+ CF H + L +
Sbjct:   41 EYYAVTTDLWSSRTTEPYISLTVHFIDEDFTLKSRCLQTAFFPENHTSDNIAAGLREAVAAWGLDETRQVCITTDNAANMVKAAS-LNE-----WTRLQCFGHRLHLAV 143

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI000DF15BBF (zinc finger BED domain-containing protein 1-like n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000DF15BBF)

HSP 1 Score: 67.8 bits (164), Expect = 3.570e-11
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0

Query:    3 FGASTDIWTDRRGKMYISFTIHVCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            F  +TD+W+ R  K Y++ TIH  +   L+      S F + HT  +IA  L+ +L+   LNP+  VAIT DN AN++KA  +          R+ CF H + L I
Sbjct:   57 FALTTDMWSSRTCKPYMTVTIHFMEDWELKTARFQTSYFPQDHTGEHIAEALQDVLKTWKLNPTGLVAITTDNGANIVKAVQLNK------WPRIQCFGHRLHLAI 156

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A498NPM3_LABRO (Zinc finger BED domain-containing 1-like protein n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498NPM3_LABRO)

HSP 1 Score: 67.8 bits (164), Expect = 3.880e-11
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 0

Query:    1 KFFGASTDIWTDRRGKMYISFTIH-VCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKR------GLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + Y+S T+H + +   L++  L  + F E+HTA NIA  L+     R      GL+ ++ V IT DNAANM+KA D+         TR+ CF H + L I
Sbjct:  172 EYYATTTDLWSSRTTEPYMSLTVHFITEDFELKSRCLQTAFFPESHTAENIAEALREAEALREAVSAWGLDETRQVCITTDNAANMVKAADLNK------WTRLQCFGHRLHLAI 280

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A673G3B6_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673G3B6_9TELE)

HSP 1 Score: 64.7 bits (156), Expect = 6.740e-10
Identity = 45/133 (33.83%), Postives = 65/133 (48.87%), Query Frame = 0

Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS----TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKA----------------GDMLNDDSNVSMT-----RVSCFCHTIQLVI 108
            KF   + DIW+DR  + Y+  T HVC+ +    TL++  L C  F   H+A NI      ILE+  +N  K   I  DNA+NM KA                 DM+ +  + + T     R+SCF H++QLV+
Sbjct:   86 KFVSVTADIWSDRTLRSYLGVTAHVCNSTANEYTLKSFLLDCRRFKGRHSADNIVAAFDEILEEYNIN-DKVEFIITDNASNMKKAFKFVMAEDHSDDSEDEEDMVGEPLDRNFTLGSRQRLSCFAHSLQLVV 217

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A672S8E9_SINGR (Uncharacterized protein n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672S8E9_SINGR)

HSP 1 Score: 64.7 bits (156), Expect = 6.740e-10
Identity = 45/133 (33.83%), Postives = 64/133 (48.12%), Query Frame = 0

Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS----TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKA----------------GDMLNDDSNVSMT-----RVSCFCHTIQLVI 108
            KF   + DIW+DR  + Y+  T HVC+ +    TL++  L C  F   H A NI      ILE+  +N  K   I  DNA+NM KA                 DM+ +  + + T     R+SCF H++QLV+
Sbjct:  101 KFVSVTADIWSDRTLRSYLGVTAHVCNSTANEYTLKSFLLDCRRFKGCHNADNIVAAFDEILEEYNIN-DKVEFIITDNASNMKKAFKFVMAEDHSDDSEDEEDMVGEPLDRNFTLGSRQRLSCFAHSLQLVV 232

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI000B92FB72 (zinc finger BED domain-containing protein RICESLEEPER 3-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B92FB72)

HSP 1 Score: 63.2 bits (152), Expect = 1.140e-9
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0

Query:    6 STDIWTDRRGKMYISFTIHVCDGSTL-RAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +TD W+      YIS T H+ +   L ++  LA    +E HTAVN+A KLK IL+   +N      IT DNA N++ A  +L  + +     V+C  H++QL I
Sbjct:   46 TTDGWSSMEQNSYISLTAHIINNEWLPKSFTLATQEMEERHTAVNLAEKLKSILDDWEINGKVSTVIT-DNAKNVVNAVKLLPLNIDNENMDVTCAAHSLQLAI 148

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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI000DC14DC8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC14DC8)

HSP 1 Score: 62.8 bits (151), Expect = 3.300e-9
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 0

Query:    6 STDIWTDRRGKMYISFTIHVCDGST---LRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +TD WT R  + +++ T H  D      L ++ LAC+ F+++HTA N+A  LK  +++ GL+  +   +  DNAAN+  A +  N        R+SCF H I L++
Sbjct:  200 TTDGWTSRNNESFLAVTAHFIDPDNVTELSSVLLACTSFEDSHTADNLALFLKNTVDEWGLS-QRITVVVSDNAANIKSAIEKCN------WRRLSCFAHDINLIV 298

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot

BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KA14_9PHAE	2.060e-27	58.70	Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec...	[more]
A0A498M545_LABRO	5.430e-13	36.70	Zinc finger BED domain-containing 1-like protein n...	[more]
A0A6P8W1Z1_GYMAC	5.660e-13	38.53	zinc finger BED domain-containing protein 1-like n...	[more]
UPI00146A3526	3.330e-12	38.53	zinc finger BED domain-containing protein 1-like n...	[more]
UPI000DF15BBF	3.570e-11	35.85	zinc finger BED domain-containing protein 1-like n...	[more]
A0A498NPM3_LABRO	3.880e-11	35.65	Zinc finger BED domain-containing 1-like protein n...	[more]
A0A673G3B6_9TELE	6.740e-10	33.83	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Si...	[more]
A0A672S8E9_SINGR	6.740e-10	33.83	Uncharacterized protein n=1 Tax=Sinocyclocheilus g...	[more]
UPI000B92FB72	1.140e-9	36.54	zinc finger BED domain-containing protein RICESLEE...	[more]
UPI000DC14DC8	3.300e-9	33.96	zinc finger BED domain-containing protein 1-like n...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007021	Domain of unknown function DUF659	PFAM	PF04937	DUF659	coord: 7..107 e-value: 5.5E-11 score: 42.5
None	No IPR available	PANTHER	PTHR46169	FAMILY NOT NAMED	coord: 1..108
None	No IPR available	PANTHER	PTHR46169:SF1		coord: 1..108
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig58940	contig	H-elongata_contig58940:2377..2700 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig58940.13396.1	mRNA_H-elongata_contig58940.13396.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig58940 2377..2700 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig58940.13396.1 ID=prot_H-elongata_contig58940.13396.1|Name=mRNA_H-elongata_contig58940.13396.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
KFFGASTDIWTDRRGKMYISFTIHVCDGSTLRAIDLACSPFDEAHTAVNI
AHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCF
CHTIQLVI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007021	DUF659
IPR012337	RNaseH-like_sf