prot_H-elongata_contig58917.13392.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58917.13392.1
Unique Nameprot_H-elongata_contig58917.13392.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.490e-39
Identity = 74/105 (70.48%), Postives = 85/105 (80.95%), Query Frame = 0
Query:    1 QGNFRAQLDDFNEGKLLRISADALLVEAPDTANTTGFL-------LEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEGN 98
            QGNFRAQ DDFNEGKLLRIS+DAL+ EA   A+TTGFL       LEAKGFRNPFRL V P SG+V+I+DVGL++AESIKVVPNPLE  E  +M NYGWPC+EG+
Sbjct:  239 QGNFRAQFDDFNEGKLLRISSDALVAEATADASTTGFLVRDTDFWLEAKGFRNPFRLAVSPVSGDVIIADVGLDSAESIKVVPNPLEAAETVSMPNYGWPCIEGD 343          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: UPI001940D2D6 (PQQ-dependent sugar dehydrogenase n=2 Tax=Dactylosporangium siamense TaxID=685454 RepID=UPI001940D2D6)

HSP 1 Score: 63.2 bits (152), Expect = 1.750e-9
Identity = 35/88 (39.77%), Postives = 50/88 (56.82%), Query Frame = 0
Query:   14 GKLLRI--SADALLVEAPD--TANTTGFLLEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEG 97
            G ++RI  +  A L   P+  +A+     + A G RNPFR  + PG+  V   +VG NT E I  + NP+     +T+GNYGWPC+EG
Sbjct:  250 GTIIRIDPATGAALPTNPNFGSADANARRIVAYGMRNPFRFTIKPGTSEVWSGEVGWNTYEEINRLQNPV----ASTIGNYGWPCIEG 333          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: UPI001CBF30AB (PQQ-dependent sugar dehydrogenase n=1 Tax=Myxococcus sp. RHSTA-1-4 TaxID=2874601 RepID=UPI001CBF30AB)

HSP 1 Score: 62.8 bits (151), Expect = 2.350e-9
Identity = 35/88 (39.77%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   13 EGKLLRISADALL-VEAPDTANTTGFL--LEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEG 97
            +GK+LRI+ D  +  + P   +TTG    + A+G RNPF   + PG+G ++I+DVG N  E I V         G    NYGWP  EG
Sbjct:  200 KGKMLRINRDGSIPTDNPFVTSTTGIYRAIWARGLRNPFSFAIQPGTGRMLINDVGANLWEEINV---------GVAGSNYGWPDTEG 278          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: UPI0013DBCF5D (PQQ-dependent sugar dehydrogenase n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI0013DBCF5D)

HSP 1 Score: 61.6 bits (148), Expect = 5.980e-9
Identity = 37/88 (42.05%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   13 EGKLLRISADALL-VEAPDTANTTGFL--LEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEG 97
            +GKLLRI+ D  +  + P  A+TTG    + A G RNPF   V PG+G ++I+DVG +  E I V         G    NYGWP  EG
Sbjct:  198 KGKLLRINRDGSIPADNPFVASTTGVYRAIWAMGLRNPFSFAVQPGTGRMLINDVGQSRWEEINV---------GVAGANYGWPDTEG 276          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: A0A4Y9Q5H4_9ACTN (Sugar dehydrogenase n=1 Tax=Blastococcus sp. CT_GayMR16 TaxID=2559607 RepID=A0A4Y9Q5H4_9ACTN)

HSP 1 Score: 60.8 bits (146), Expect = 1.120e-8
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   41 AKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEGN 98
            A G RNPFR+V+ PG+  V + DVG  T E I  +P P     G  + N+GWPC+EGN
Sbjct:  293 AHGMRNPFRMVLRPGTDEVWVGDVGFVTWEEINRLPLP-----GQPVSNFGWPCLEGN 345          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: UPI00138E0697 (PQQ-dependent sugar dehydrogenase n=1 Tax=Dactylosporangium aurantiacum TaxID=35754 RepID=UPI00138E0697)

HSP 1 Score: 59.7 bits (143), Expect = 2.900e-8
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   14 GKLLRI--SADALLVEAPD--TANTTGFLLEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEG 97
            G ++RI  +  A L   P+  +A+     + A G RNPFR    PG+  +   +VG  T E I  V NP+     +T+GNYGWPC+EG
Sbjct:  251 GTIIRIDPTTGAALPTNPNYASADANARRIVAYGMRNPFRFTTRPGTNELWSGEVGWTTFEEINRVQNPV----ASTIGNYGWPCIEG 334          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: A0A8J4E924_9ACTN (PKD domain-containing protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4E924_9ACTN)

HSP 1 Score: 59.3 bits (142), Expect = 3.860e-8
Identity = 27/56 (48.21%), Postives = 33/56 (58.93%), Query Frame = 0
Query:   43 GFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEGN 98
            G RNPFR  + PG+  V +++VG N  E +  VP         TMGNYGWPC EGN
Sbjct:  265 GLRNPFRFAMRPGTNEVWLTEVGWNGYEEVNRVPTD-------TMGNYGWPCYEGN 313          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: UPI001B32641F (PQQ-dependent sugar dehydrogenase n=1 Tax=Gemmata palustris TaxID=2822762 RepID=UPI001B32641F)

HSP 1 Score: 58.9 bits (141), Expect = 5.220e-8
Identity = 35/88 (39.77%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   14 GKLLRISADALLV-EAPDTANTTGF--LLEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEGN 98
            GK+LRI++D  +  + P     TG    + A G RNPF + V PG+G ++I+DVG    E         EV +GA   NYGWP  EG+
Sbjct:  177 GKVLRINSDGTIPSDNPFFGTATGDNRAIYALGLRNPFTMAVQPGTGRLLINDVGGTQFE---------EVNQGAVGANYGWPTTEGD 255          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: A0A2K8Z9V9_9BACT (Uncharacterized protein n=2 Tax=Spirosoma pollinicola TaxID=2057025 RepID=A0A2K8Z9V9_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 5.380e-8
Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 0
Query:   13 EGKLLRISADALL-VEAPDTANTTGF--LLEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEGN 98
            +GK+LR++ D  +  + P   +T G    + A G RNPFR+VV PG+G V ++DVG +  E         E+ +     NYGWP +EGN
Sbjct:  204 KGKILRLNPDGSIPTDNPFYNSTVGNNRAIWALGLRNPFRIVVQPGTGTVFVNDVGQSAYE---------EINQVVAGKNYGWPGIEGN 283          
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Match: UPI0019D6ED10 (PQQ-dependent sugar dehydrogenase n=1 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI0019D6ED10)

HSP 1 Score: 58.5 bits (140), Expect = 7.240e-8
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   13 EGKLLRISADALL-VEAPDTANTTGFL--LEAKGFRNPFRLVVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEG 97
            +GK+LRI+ D  +  + P  ++TTG    + A G RNPF   + PG+G ++I+DVG +  E I V         G    NYGWP  EG
Sbjct:  197 KGKMLRINPDGSIPTDNPFVSSTTGVYRAIWAIGLRNPFSFAIQPGTGRMLINDVGASHWEEINV---------GVAGSNYGWPDTEG 275          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58917.13392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE2.490e-3970.48PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
UPI001940D2D61.750e-939.77PQQ-dependent sugar dehydrogenase n=2 Tax=Dactylos... [more]
UPI001CBF30AB2.350e-939.77PQQ-dependent sugar dehydrogenase n=1 Tax=Myxococc... [more]
UPI0013DBCF5D5.980e-942.05PQQ-dependent sugar dehydrogenase n=1 Tax=Pyxidico... [more]
A0A4Y9Q5H4_9ACTN1.120e-848.28Sugar dehydrogenase n=1 Tax=Blastococcus sp. CT_Ga... [more]
UPI00138E06972.900e-838.64PQQ-dependent sugar dehydrogenase n=1 Tax=Dactylos... [more]
A0A8J4E924_9ACTN3.860e-848.21PKD domain-containing protein n=1 Tax=Virgisporang... [more]
UPI001B32641F5.220e-839.77PQQ-dependent sugar dehydrogenase n=1 Tax=Gemmata ... [more]
A0A2K8Z9V9_9BACT5.380e-838.20Uncharacterized protein n=2 Tax=Spirosoma pollinic... [more]
UPI0019D6ED107.240e-838.64PQQ-dependent sugar dehydrogenase n=1 Tax=Pyxidico... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 1..98
e-value: 1.6E-13
score: 52.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58917contigH-elongata_contig58917:845..1463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58917.13392.1mRNA_H-elongata_contig58917.13392.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58917 845..1463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58917.13392.1 ID=prot_H-elongata_contig58917.13392.1|Name=mRNA_H-elongata_contig58917.13392.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
QGNFRAQLDDFNEGKLLRISADALLVEAPDTANTTGFLLEAKGFRNPFRL
VVMPGSGNVVISDVGLNTAESIKVVPNPLEVEEGATMGNYGWPCMEGN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like