prot_H-elongata_contig58870.13388.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58870.13388.1
Unique Nameprot_H-elongata_contig58870.13388.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 93.6 bits (231), Expect = 4.160e-19
Identity = 51/185 (27.57%), Postives = 92/185 (49.73%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKF----------------CVEMTAIDSMVVV---HVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 166
            QV G+++ E Y P    +S+R  +     KD +  H D +  +L  D++E++Y+     + E  G V RL KA++GL Q  RCWN K                 C+ +   +S +V+    VDD++  + +  +     + L   F++K +      +G ++TR+R  R+L IDQ  Y+E ++++
Sbjct:  297 QVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKR 481          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 93.6 bits (231), Expect = 4.470e-19
Identity = 51/185 (27.57%), Postives = 92/185 (49.73%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKF----------------CVEMTAIDSMVVV---HVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 166
            QV G+++ E Y P    +S+R  +     KD +  H D +  +L  D++E++Y+     + E  G V RL KA++GL Q  RCWN K                 C+ +   +S +V+    VDD++  + +  +     + L   F++K +      +G ++TR+R  R+L IDQ  Y+E ++++
Sbjct:  902 QVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKR 1086          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A224XJ98_9HEMI (Putative copia-like retrotransposable element (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XJ98_9HEMI)

HSP 1 Score: 91.3 bits (225), Expect = 2.740e-18
Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAIDSMVVVHVDDILAHTKDKAKMYTFAAG--------------LGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMV 164
            Q  GV Y E Y P  +  +IR+ L    +K+ E +  D +  FL   +DE++YI + E   E  G V RL KA++GL Q+ RCWNN+F   + +I  M   + + +  + KDK  +  F                 L ++F +  I D   ++G  + R+R+ + +K+ Q  Y+E ++
Sbjct:  502 QQYGVEYEETYAPVASVNTIRMMLSIANSKNWEVQQLDVKTAFLNGTLDEEIYIRLPEGPYEEKGKVRRLCKALYGLKQSSRCWNNEFTKYIMSIGFMKSDYDESLFYNLKDKTYIILFVDDILIVGEDVRNSKNKLIRRFDMTDIGDVKKFIGIEVERDRRNKTMKLHQTQYIEKLL 679          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 89.7 bits (221), Expect = 9.590e-18
Identity = 54/176 (30.68%), Postives = 89/176 (50.57%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEF-PGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAIDSM-------------------VVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQ 156
            Q +GV++ E Y P     ++R  L    A+D E    D +  FL  +++E++Y++  + Y++  P  V RL K I+GL Q  R W+ K   E+  I+                     VVV VDDIL   K + ++    A L +KF ++ +  A Y++G  +TR+R+AR +K+ Q
Sbjct:  635 QRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDGERVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQ 810          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A182GPU0_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GPU0_AEDAL)

HSP 1 Score: 87.8 bits (216), Expect = 4.300e-17
Identity = 55/186 (29.57%), Postives = 94/186 (50.54%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADI-DEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNK-------FCVEMTAIDS------------MVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 166
            Q  GV+Y E Y P    A+IR  +   V  D +    D    FL++++ DE+LY+   E + +  G V RL +A++GL Q+ R WN K       F ++ + +D+             V ++VDD+L  T ++A        L +KF +K + +A + +G  I R+R    L +DQ  Y+E ++++
Sbjct:  324 QKPGVDYEEVYSPVVRYATIRYLMALAVKFDLDVDQMDVVTAFLQSELGDEELYMVQPEGFDQVNGKVCRLRRALYGLKQSSRVWNEKLDAVLRGFGLQRSLVDTCLYWIIDGDKILFVTIYVDDLLIFTNNRALKMKLKQYLMEKFDMKDLGEATHCLGIRIARDRTEGRLSLDQEAYIEKVIQR 509          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 87.8 bits (216), Expect = 4.600e-17
Identity = 48/185 (25.95%), Postives = 92/185 (49.73%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAID-------------------SMVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 166
            Q+ GV+YT+ Y P     ++R  +     KD E R  D +  +L  +++E++++E  E + +  G V RL   ++GL Q  R WN K   ++T +                    +++ V VDDI+     ++++ T  + L + F++K + +    +G  I RNRK + + I Q  Y+ +++E+
Sbjct:  929 QIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILER 1113          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: UPI001D05617A (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D05617A)

HSP 1 Score: 87.0 bits (214), Expect = 8.290e-17
Identity = 48/179 (26.82%), Postives = 86/179 (48.04%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAID---------------SMVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMV 164
            Q+EG++Y+E +       S R       A+D E    D +  FL  DIDE++Y+E  E +++  G V RL KAI+GL Q  R W       +  +                S++ ++VDD+L       ++      L ++F++  +    +Y+G  +TR+R  R +++ Q  Y+E ++
Sbjct:  670 QLEGIDYSETFASVVRPESYRTIFAIAAAEDLEIEQMDVKTAFLYGDIDEEVYLEQPEGFEDGTGRVCRLKKAIYGLKQAPRIWFQTIAKFLETLGYRPIAADVSVFVRGKSIIAIYVDDLLLTGACPREVQRIKDALSKRFQMTDLGPCSHYLGIKVTRDRARRRIELSQRAYIEKIL 848          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE)

HSP 1 Score: 85.9 bits (211), Expect = 2.050e-16
Identity = 53/186 (28.49%), Postives = 91/186 (48.92%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFP-GAVGRLSKAIHGLVQTRRCWNNKFCVEMTAI-----------------DSMVVV--HVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 166
            Q +G++Y E + P     S+R        KD    H D +  +L+  ID+++Y+   EE +  P G V  L +A++GL Q+ RCWN +    MT +                 D M+V+  +VDD+L  +            L  +F +K++ +    +G +ITR+RK  +L I+Q  Y++ ++EK
Sbjct:  433 QRQGIDYEETFSPVVKYPSLRFLFALATKKDMNITHMDVKTAYLQGQIDKEIYVIPPEEMKNKPKGKVWLLKRAMYGLKQSGRCWNQRLHTVMTGLGLQQSKADPCIYFKVIPDGMIVIAIYVDDLLIFSNQCDLQTCVTQKLENEFSMKNLGEVKDCLGMNITRDRKLGKLWINQTTYIKKIIEK 618          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI)

HSP 1 Score: 85.9 bits (211), Expect = 2.150e-16
Identity = 52/176 (29.55%), Postives = 88/176 (50.00%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEF-PGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAIDSM-------------------VVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQ 156
            Q +GV++ E Y P     ++R  L    A+D E    D +  FL  +++E++Y++  + Y++  P  V RL K I+GL Q  R W+ +   E+  I+                     VVV VDDIL     + ++    A L +KF ++ +  A Y++G  +TR+R+AR +K+ Q
Sbjct:  910 QRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPKTVCRLKKTIYGLRQAPRAWHQRLKAELGEIEFQASESDAALFTGVVDGERVWVVVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKLTQ 1085          
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A0F7ZQQ7_9HYPO (Integrase catalytic domain-containing protein n=2 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZQQ7_9HYPO)

HSP 1 Score: 85.5 bits (210), Expect = 2.940e-16
Identity = 47/179 (26.26%), Postives = 86/179 (48.04%), Query Frame = 0
Query:    1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAID---------------SMVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMV 164
            Q+EG++Y+E +       S R       A+D E    D +  FL  DIDE++Y+E  E +++  G V RL KAI+GL Q  R W       +  +                S++ ++VDD+L       ++      L ++F++  +    +Y+G  +TR+R  R +++ Q  Y++ ++
Sbjct: 1031 QLEGIDYSETFASVVRPESYRTIFAIAAAEDLEIEQMDVKTAFLYGDIDEEVYLEQPEGFEDGTGRVCRLKKAIYGLQQAPRIWFQTIAKFLETLGYRPIAADVSVFVRGKSIIAIYVDDLLLTGACPREVQRIKDALSKRFQMTDLGPCSHYLGIKVTRDRARRRIELSQRAYIKKIL 1209          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5GI29_9HEMI4.160e-1927.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI4.470e-1927.57Integrase catalytic domain-containing protein (Fra... [more]
A0A224XJ98_9HEMI2.740e-1829.78Putative copia-like retrotransposable element (Fra... [more]
A0A1Y1IVX6_KLENI9.590e-1830.68Integrase catalytic domain-containing protein (Fra... [more]
A0A182GPU0_AEDAL4.300e-1729.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM4.600e-1725.95Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
UPI001D05617A8.290e-1726.82reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A8I6TLX8_CIMLE2.050e-1628.49Integrase catalytic domain-containing protein n=1 ... [more]
A0A1Y1IQX0_KLENI2.150e-1629.55Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A0F7ZQQ7_9HYPO2.940e-1626.26Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..88
e-value: 6.8E-8
score: 32.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58870contigH-elongata_contig58870:2628..3187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58870.13388.1mRNA_H-elongata_contig58870.13388.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58870 2628..3187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58870.13388.1 ID=prot_H-elongata_contig58870.13388.1|Name=mRNA_H-elongata_contig58870.13388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDE
KLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAIDSMVV
VHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKAR
ELKIDQHLYVESMVEKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2