mRNA_H-elongata_contig58870.13388.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI) HSP 1 Score: 93.6 bits (231), Expect = 4.160e-19 Identity = 51/185 (27.57%), Postives = 92/185 (49.73%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKF----------------CVEMTAIDSMVVV---HVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 498
QV G+++ E Y P +S+R + KD + H D + +L D++E++Y+ + E G V RL KA++GL Q RCWN K C+ + +S +V+ VDD++ + + + + L F++K + +G ++TR+R R+L IDQ Y+E ++++
Sbjct: 297 QVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKR 481
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI) HSP 1 Score: 93.6 bits (231), Expect = 4.470e-19 Identity = 51/185 (27.57%), Postives = 92/185 (49.73%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKF----------------CVEMTAIDSMVVV---HVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 498
QV G+++ E Y P +S+R + KD + H D + +L D++E++Y+ + E G V RL KA++GL Q RCWN K C+ + +S +V+ VDD++ + + + + L F++K + +G ++TR+R R+L IDQ Y+E ++++
Sbjct: 902 QVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKR 1086
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI) HSP 1 Score: 89.7 bits (221), Expect = 9.590e-18 Identity = 54/176 (30.68%), Postives = 89/176 (50.57%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEF-PGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAIDSM-------------------VVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQ 468
Q +GV++ E Y P ++R L A+D E D + FL +++E++Y++ + Y++ P V RL K I+GL Q R W+ K E+ I+ VVV VDDIL K + ++ A L +KF ++ + A Y++G +TR+R+AR +K+ Q
Sbjct: 635 QRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDGERVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQ 810
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A182GPU0_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GPU0_AEDAL) HSP 1 Score: 87.8 bits (216), Expect = 4.300e-17 Identity = 55/186 (29.57%), Postives = 94/186 (50.54%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADI-DEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNK-------FCVEMTAIDS------------MVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 498
Q GV+Y E Y P A+IR + V D + D FL++++ DE+LY+ E + + G V RL +A++GL Q+ R WN K F ++ + +D+ V ++VDD+L T ++A L +KF +K + +A + +G I R+R L +DQ Y+E ++++
Sbjct: 324 QKPGVDYEEVYSPVVRYATIRYLMALAVKFDLDVDQMDVVTAFLQSELGDEELYMVQPEGFDQVNGKVCRLRRALYGLKQSSRVWNEKLDAVLRGFGLQRSLVDTCLYWIIDGDKILFVTIYVDDLLIFTNNRALKMKLKQYLMEKFDMKDLGEATHCLGIRIARDRTEGRLSLDQEAYIEKVIQR 509
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 87.8 bits (216), Expect = 4.600e-17 Identity = 48/185 (25.95%), Postives = 92/185 (49.73%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAID-------------------SMVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 498
Q+ GV+YT+ Y P ++R + KD E R D + +L +++E++++E E + + G V RL ++GL Q R WN K ++T + +++ V VDDI+ ++++ T + L + F++K + + +G I RNRK + + I Q Y+ +++E+
Sbjct: 929 QIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILER 1113
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: UPI001D05617A (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D05617A) HSP 1 Score: 87.0 bits (214), Expect = 8.290e-17 Identity = 48/179 (26.82%), Postives = 86/179 (48.04%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAID---------------SMVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMV 492
Q+EG++Y+E + S R A+D E D + FL DIDE++Y+E E +++ G V RL KAI+GL Q R W + + S++ ++VDD+L ++ L ++F++ + +Y+G +TR+R R +++ Q Y+E ++
Sbjct: 670 QLEGIDYSETFASVVRPESYRTIFAIAAAEDLEIEQMDVKTAFLYGDIDEEVYLEQPEGFEDGTGRVCRLKKAIYGLKQAPRIWFQTIAKFLETLGYRPIAADVSVFVRGKSIIAIYVDDLLLTGACPREVQRIKDALSKRFQMTDLGPCSHYLGIKVTRDRARRRIELSQRAYIEKIL 848
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE) HSP 1 Score: 85.9 bits (211), Expect = 2.050e-16 Identity = 53/186 (28.49%), Postives = 91/186 (48.92%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFP-GAVGRLSKAIHGLVQTRRCWNNKFCVEMTAI-----------------DSMVVV--HVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 498
Q +G++Y E + P S+R KD H D + +L+ ID+++Y+ EE + P G V L +A++GL Q+ RCWN + MT + D M+V+ +VDD+L + L +F +K++ + +G +ITR+RK +L I+Q Y++ ++EK
Sbjct: 433 QRQGIDYEETFSPVVKYPSLRFLFALATKKDMNITHMDVKTAYLQGQIDKEIYVIPPEEMKNKPKGKVWLLKRAMYGLKQSGRCWNQRLHTVMTGLGLQQSKADPCIYFKVIPDGMIVIAIYVDDLLIFSNQCDLQTCVTQKLENEFSMKNLGEVKDCLGMNITRDRKLGKLWINQTTYIKKIIEK 618
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI) HSP 1 Score: 85.9 bits (211), Expect = 2.150e-16 Identity = 52/176 (29.55%), Postives = 88/176 (50.00%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEF-PGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAIDSM-------------------VVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQ 468
Q +GV++ E Y P ++R L A+D E D + FL +++E++Y++ + Y++ P V RL K I+GL Q R W+ + E+ I+ VVV VDDIL + ++ A L +KF ++ + A Y++G +TR+R+AR +K+ Q
Sbjct: 910 QRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPKTVCRLKKTIYGLRQAPRAWHQRLKAELGEIEFQASESDAALFTGVVDGERVWVVVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKLTQ 1085
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A0F7ZQQ7_9HYPO (Integrase catalytic domain-containing protein n=2 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZQQ7_9HYPO) HSP 1 Score: 85.5 bits (210), Expect = 2.940e-16 Identity = 47/179 (26.26%), Postives = 86/179 (48.04%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGAVGRLSKAIHGLVQTRRCWNNKFCVEMTAID---------------SMVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMV 492
Q+EG++Y+E + S R A+D E D + FL DIDE++Y+E E +++ G V RL KAI+GL Q R W + + S++ ++VDD+L ++ L ++F++ + +Y+G +TR+R R +++ Q Y++ ++
Sbjct: 1031 QLEGIDYSETFASVVRPESYRTIFAIAAAEDLEIEQMDVKTAFLYGDIDEEVYLEQPEGFEDGTGRVCRLKKAIYGLQQAPRIWFQTIAKFLETLGYRPIAADVSVFVRGKSIIAIYVDDLLLTGACPREVQRIKDALSKRFQMTDLGPCSHYLGIKVTRDRARRRIELSQRAYIKKIL 1209
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Match: A0A177WMM1_BATDL (Uncharacterized protein n=4 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WMM1_BATDL) HSP 1 Score: 85.5 bits (210), Expect = 2.950e-16 Identity = 59/189 (31.22%), Postives = 89/189 (47.09%), Query Frame = 1
Query: 1 QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEKLYIEISEEYQEFPGA----VGRLSKAIHGLVQTRRCWN-----------------NKFCVEMTAIDS--MVVVHVDDILAHTKDKAKMYTFAAGLGQKFKLKHIDDAGYYMGCHITRNRKARELKIDQHLYVESMVEK 498
QV G+++ E Y P S+RI L D E H DA FL IDE+LYIE+ E Y G VGRL KA++GL Q WN +K + ++A D M+ ++VDDIL +++ + + L ++F +K + + I RNR R + + Q Y+ ++EK
Sbjct: 1074 QVPGIDFHETYAPVLKFTSLRIILALAAIYDWEVDHTDANNAFLNGTIDEELYIELPEGYNNSTGGAIKRVGRLQKALYGLRQAPYQWNKVLVDKCLNMGFTQCMTDKCILILSAKDRFVMIAIYVDDILFVGNNRSLLERMKSKLFKEFSMKDLGPIHTCLNIRIIRNRMGRTITLSQSHYLSDVLEK 1262 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58870.13388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58870.13388.1 >prot_H-elongata_contig58870.13388.1 ID=prot_H-elongata_contig58870.13388.1|Name=mRNA_H-elongata_contig58870.13388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp QVEGVNYTEKYLPTPATASIRIRLVTEVAKDGESRHFDAERVFLKADIDEback to top mRNA from alignment at H-elongata_contig58870:2628..3187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58870.13388.1 ID=mRNA_H-elongata_contig58870.13388.1|Name=mRNA_H-elongata_contig58870.13388.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=560bp|location=Sequence derived from alignment at H-elongata_contig58870:2628..3187- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58870:2628..3187- >mRNA_H-elongata_contig58870.13388.1 ID=mRNA_H-elongata_contig58870.13388.1|Name=mRNA_H-elongata_contig58870.13388.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at H-elongata_contig58870:2628..3187- (Himanthalia elongata Himel1 dioecious)back to top |