mRNA_H-elongata_contig58809.13380.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A6H5JI62_9PHAE (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI62_9PHAE) HSP 1 Score: 263 bits (671), Expect = 3.110e-84 Identity = 142/217 (65.44%), Postives = 161/217 (74.19%), Query Frame = 1
Query: 1 QEEKASRAVAAQGSGLSKSWRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGC--SGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
QE++A ++V +G LSK WRDKYEREARK WDLFY RNA NFFKDRHYLGTVFPEL ET AD EL++ R K V N T G +R GRRTLLELGCGVGNAVFP+LEEN GLFV+A DLS +GI +L +HP Y GRC+A+VLDAT DDLP V+E GGVDLVLLQFS+SAVAPKDM VA L E AL+PGGK+L RDYGR
Sbjct: 24 QEKEALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGTVFPELTETGADLELSQ-RLEKSE----VYRNGDGGETVTENGTRRKARRLGRRTLLELGCGVGNAVFPLLEENRGLFVIAADLSPRGIGVLKQHPKYSCGRCEALVLDATADDLPPGVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGR 235
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A6G0XWX7_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWX7_9STRA) HSP 1 Score: 160 bits (404), Expect = 7.590e-45 Identity = 85/196 (43.37%), Postives = 106/196 (54.08%), Query Frame = 1
Query: 58 WRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
W+ KYE+EA K WDLFY RN+TNF+KDRHYL VFP+LA D D E W LLE+GCGVGNA P+LE N L VVA+D ++ +EL + P+Y RC A V D T D LP+ + E GGV+ L F +SA+ P M A++PGGK+ FRDYGR
Sbjct: 53 WQGKYEKEAAKNWDLFYKRNSTNFYKDRHYLHVVFPDLAPHDDDPEKI---W---------------------------------LLEVGCGVGNAALPLLEVNPRLHVVAIDFANSAVELFHKQPLYDPSRCNASVCDITADPLPSIIDEAGGVNYALFMFCLSALHPDKMQDAVQKIVNAVKPGGKIFFRDYGR 212
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A835Z8H9_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H9_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.130e-44 Identity = 96/208 (46.15%), Postives = 109/208 (52.40%), Query Frame = 1
Query: 58 WRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYG-----------RCQAMVLDATVDD-LPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
WRD +ER A + WD FY RN F+KDRHYL FPE A P P R GRR LLELGCGVGNAVFP+L++N GL+V ALDL+ I LL G G RC A V DA D LP V GGVD+V+L F++SAVAP+ RV A ALRPGG VLFRDYGR
Sbjct: 5 WRDAHERHAARNWDRFYRRNGDAFYKDRHYLERAFPEEAL-----------------------------PPAPXXXXXXRRGRRALLELGCGVGNAVFPLLQQNRGLYVYALDLAPSAIALLRGRRDGGGGDGAAGGGDFAERCYAEVHDAAAADALPCAVTAEGGVDMVMLMFALSAVAPEKHARVMAKAAAALRPGGVVLFRDYGR 183
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A067C535_SAPPC (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C535_SAPPC) HSP 1 Score: 156 bits (395), Expect = 1.970e-43 Identity = 84/197 (42.64%), Postives = 106/197 (53.81%), Query Frame = 1
Query: 58 WRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELA-ETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
W++KYEREA K WDLFY RN+TNF+KDRHYL VFP+LA + D ++ +W LLE+GCGVGNA P+LE N L VVA+D + K ++L P+Y R V D T D LPA + E GGV+ L F +SA+ P M A+RPGGK+ FRDYGR
Sbjct: 54 WQEKYEREAAKSWDLFYKRNSTNFYKDRHYLHVVFPDLAPKEDGTMASSEPQW---------------------------------LLEVGCGVGNAALPLLEVNPNLNVVAIDFAPKAVDLFKEQPLYDPARVHVSVCDITKDVLPAIIDEAGGVNYALFMFCLSALRPDKMQDAVAKIASAVRPGGKIFFRDYGR 217
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A2D4C7Y2_PYTIN (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7Y2_PYTIN) HSP 1 Score: 154 bits (389), Expect = 1.800e-42 Identity = 86/214 (40.19%), Postives = 110/214 (51.40%), Query Frame = 1
Query: 4 EEKASRAVAAQGSGLSKSWRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
EE A +A S + W++KYE+ A K WD FY +N+TNF+KDRHYL VFP+L + DAD ++ LLE+GCGVGNA P+LE N L VVA+D + I LL P+Y R A V D T D+LPA GGVD L F +SA+ P+ M A++PGGK+ FRDYGR
Sbjct: 43 EELAKELLARDTSTIPTFWQEKYEKXAAKSWDKFYKKNSTNFYKDRHYLHIVFPDLDKNDADPS------------------------------------KKVLLEVGCGVGNAALPLLEVNPSLHVVAIDFADSAINLLKTQPLYDPTRVHASVCDITNDELPAXAHADGGVDFALFLFCLSAIHPEKMQAAVNKVVAAIKPGGKLFFRDYGR 220
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A024U4J4_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4J4_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.070e-42 Identity = 83/196 (42.35%), Postives = 103/196 (52.55%), Query Frame = 1
Query: 58 WRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
W++KYE+EA K WDLFY RN+TNF+KDRHYL VF +LA + D K W LLE+GCGVGNA P+LE N L VVA+D + K +EL + P+Y RC V D T D LPA + GGV L F +SA+ P M A++PGGK+ FRDYGR
Sbjct: 56 WQNKYEKEAAKSWDLFYKRNSTNFYKDRHYLHLVFSDLAPKEGDTSDEKT-W---------------------------------LLEVGCGVGNAALPLLEVNPRLHVVAIDFAAKAVELFHQQPLYDPSRCHVSVCDITTDPLPAVIDAEGGVHFALFMFCLSALHPDKMQAAVQKIADAVKPGGKIFFRDYGR 217
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A1V9ZGM9_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGM9_9STRA) HSP 1 Score: 153 bits (386), Expect = 4.130e-42 Identity = 84/196 (42.86%), Postives = 103/196 (52.55%), Query Frame = 1
Query: 58 WRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
W++KYEREA K WDLFY RN TNF+KDRHYL VFP LA + N S P LLE+GCGVGNA P+LE N L VVA+D + K ++L P++ RC V D T D LP+ + E GGV+ L F +SA+ P M A+RPGGK+ FRDYGR
Sbjct: 54 WQEKYEREAAKSWDLFYKRNTTNFYKDRHYLHLVFPGLAPKE---------------------NETSTEPEW-------------LLEVGCGVGNAALPLLEINPRLNVVAIDFAPKAVDLFKEQPLFDPARCHVSVCDITKDALPSVIDEAGGVNFALFMFCLSALRPDKMRDAVAKIASAVRPGGKIFFRDYGR 215
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A7S2JMW2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JMW2_9EUKA) HSP 1 Score: 149 bits (375), Expect = 2.510e-41 Identity = 88/199 (44.22%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 46 LSKSWRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPAC-VVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDY 639
+ K WR+KYE EARK WDLFY RN TNFF+DRH+ FPEL KD +Q G S R +LELGCGVGNAVFP+LEEN LF A+D S + I+LL HP Y QA V DAT + L V G VD +L F +SA++P+ M L+ GG+VLFRDY
Sbjct: 32 VPKFWREKYEAEARKNWDLFYKRNKTNFFRDRHWFRHSFPELL--------------KDESQDGA-------------------SERTLVLELGCGVGNAVFPLLEENPRLFFYAVDFSKRAIDLLKEHPRYDVSDVQATVCDATCESLVTVGQVPAGSVDYAILCFVLSAISPEKMAASLHNLRTVLKHGGRVLFRDY 197
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A7S2MQY1_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQY1_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.530e-40 Identity = 89/217 (41.01%), Postives = 119/217 (54.84%), Query Frame = 1
Query: 7 EKASRAVAAQGSGLSKSWRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMY----GYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
E+A V QG L ++ YER+A+K WD+FY RN TNFFKDRHYL V+PEL + + P + P+ R LE+GCGVGNA+FP+LE L +A+D S + I++L H Y GRC A V D T D+LP GGG+D+V+L F +SA++P++M R AL+PGG +LFRDYGR
Sbjct: 69 EEAIACVEKQGPPLREAMVRFYERDAKKNWDMFYKRNGTNFFKDRHYLARVYPELRDHE--------------------------PAQNPR--------IRRFLEVGCGVGNALFPLLESQPHLNGIAVDFSSEAIQVLKTHKNYLSLNEQGRCVAHVCDITKDELPPEAYIGGGLDVVILLFCLSAISPENMRRSVERLSGALKPGGVLLFRDYGR 251
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Match: A0A8K1CBA0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBA0_PYTOL) HSP 1 Score: 148 bits (373), Expect = 7.900e-40 Identity = 82/202 (40.59%), Postives = 103/202 (50.99%), Query Frame = 1
Query: 40 SGLSKSWRDKYEREARKYWDLFYARNATNFFKDRHYLGTVFPELAETDADRELAKVRWGKDTAQCGVQSNAYSPPPRTPQGCSGQRSGRRTLLELGCGVGNAVFPILEENHGLFVVALDLSHKGIELLTRHPMYGYGRCQAMVLDATVDDLPACVVEGGGVDLVLLQFSVSAVAPKDMGRVALLAERALRPGGKVLFRDYGR 645
S + + W++KYEREA K WD FY RN TNF+KDRHYL VFP+L ++D + ++ LLE+G GVGNA P+LE N L VVA+D + I LL + P+Y R A V D T D LP GGVD L F +SA+ P M A+RPGGK+ FRDYGR
Sbjct: 78 SSIPEYWQNKYEREAAKSWDKFYKRNTTNFYKDRHYLHLVFPDLNVNESD------------------------------------TSKKVLLEVGSGVGNAALPLLEVNPSLHVVAIDFADTAIALLKKQPLYDETRVHASVCDITKDPLPEVAFADGGVDFALFLFCLSALHPDKMQDAVNKVVAAIRPGGKLFFRDYGR 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58809.13380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58809.13380.1 >prot_H-elongata_contig58809.13380.1 ID=prot_H-elongata_contig58809.13380.1|Name=mRNA_H-elongata_contig58809.13380.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp QEEKASRAVAAQGSGLSKSWRDKYEREARKYWDLFYARNATNFFKDRHYLback to top mRNA from alignment at H-elongata_contig58809:155..2120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58809.13380.1 ID=mRNA_H-elongata_contig58809.13380.1|Name=mRNA_H-elongata_contig58809.13380.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1966bp|location=Sequence derived from alignment at H-elongata_contig58809:155..2120- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58809:155..2120- >mRNA_H-elongata_contig58809.13380.1 ID=mRNA_H-elongata_contig58809.13380.1|Name=mRNA_H-elongata_contig58809.13380.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig58809:155..2120- (Himanthalia elongata Himel1 dioecious)back to top |