mRNA_H-elongata_contig5877.13370.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ0_ECTSI) HSP 1 Score: 658 bits (1697), Expect = 1.440e-217 Identity = 442/932 (47.42%), Postives = 535/932 (57.40%), Query Frame = 1
Query: 1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGD----------QTG--GIV---SAKSPRGISRG----------------TCVAYDPDTKTPTTFGSAKD-----SKCLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNG-SKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVGS----AASTEAVERTPLA----DRSVHISDCGGAAGASAVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWE-RSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVP------PDKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
+++P LAM VVAFSS LDVAAIE+ M KPLDFN EL+TVGWSNVISGL GGFTGSYIFSQTIFN+RAGVDTR+A ATS + LV AASPA++IS+ P+ FFG+LLVLIAVDLMVEWLW+AR+RMM AEY+VCLAT+ +IQA G+EKG++VG VLAAL FT+TYAQ VP VM R+KAS VMRTFEERVIL+AH++QTV QGYIFFGSA +IL+DVK+ I+WG D TG G V S S R + P + T G+ S N +G + ++S A + P + + + S G S G + +L+ +R +T + +G + G A+ + E+ PLA S H GGA + G YGA+++G R R S E R G +GAVQ YM WANGGGS D P + R RS S SLLP E+RTRRV+LDFSNVVGVDATAARSCFLMLK+VL+ S V VVFSG K+QALLRSHGVI D+DPVF+SLDTALEW EE +L EG+G + A A + E A FLGDHE YY RA +LRRRSS + + +G +N LV VGDVGSLQ ILEDYLEVDRY+ PESV SVL EA+ FFR+EHV AG V+ D P P+K++FIG+GSVELQI GE G +R KVC+GGTFGEVGF+L+TP+AFRA+AREPCHLHTLDR GM MQ +NPGLC+LVQ AV+KSICLA S+S+ESAH GPVD
Sbjct: 284 RIVPKLLAMIVVVAFSSCLDVAAIEIEMAKPLDFNGELQTVGWSNVISGLFGGFTGSYIFSQTIFNLRAGVDTRVASATSFVMLVGVAASPASVISFPPRCFFGALLVLIAVDLMVEWLWQARVRMMPAEYLVCLATYGSIQAWGVEKGLVVGLVLAALGFTVTYAQ---------VPAVMKTRVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVQILSDVKDGIVWGTDLPATPNAGAPATGIFGNVYDDSNHSTRSVGHPXXXXXXXXXXXXTYLKAAAHVKPSGEGTTAVGAMSPCGDILSPVFNRSGAVYRSSSATAAVAAPSSVLPGPSPMSTSSQQQGGASPQGRSSPLAQSLARTRSAGGTTTTTSTGVYGADGGRGRLFHRAGGLLPGASEHQQAEQEPLAVLANASSRHDGGSGGANFSVPTRETTG--YGAMEEGGAGGXXXXXXXXXXXXTAGVRVRRLRGASLGEEPRVG-----EGAVQEYMSPWANGGGSFVDCPGLTGRTGGGDSSPSFSGRGARSPSVASLLPASEERTRRVILDFSNVVGVDATAARSCFLMLKVVLKTSGVHVVFSGTTRKVQALLRSHGVITDDDPVFNSLDTALEWSEEMMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-------EGEG-EQGRPAAAAPEAEAEAAVFLGDHEDYYLRAGTLRRRSSFSTQISDRGLDNPLV-VGDVGSLQFILEDYLEVDRYQAPESVRSVLGEAKSFFRREHVVAGAVLADYGSPSSSPSSPEKVYFIGSGSVELQIPGECG-PRRLQKVCAGGTFGEVGFFLRTPEAFRAVAREPCHLHTLDRAGMVAMQHQNPGLCILVQKAVMKSICLAKSLSIESAHLGPVD 1189
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A6H5KE91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE91_9PHAE) HSP 1 Score: 506 bits (1304), Expect = 9.550e-164 Identity = 360/843 (42.70%), Postives = 441/843 (52.31%), Query Frame = 1
Query: 376 MMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKD------------------------SKCLNGNGDL---------------------------------------PIAASGPRAASKPMESISEST---LFTRRSSPLNGSKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVG-----SAASTEAVERTPLADRSVHISDCGGAAGAS-AVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATG----RPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTAR------GTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVPP------DKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
MM AEY+VCLATF +IQA G+EKG++ G VLAALSFT+TYAQ VPTVMTAR+KAS VMRTFEERVIL+AH++QTV QGYIFFGSA KIL+DVK+RI+WG D + G+ YD ++ T G+ + + +N GD+ + S PR P E+ S+S T S G++ +L+ +R +T + G + G ++ E ++ P + GG+ GA+ +V YGA+++G G GV GATG R S E G G +GAVQ YM LWANGGGS DSP + R RS S SLLP E+RTRRV+LDFSNVVGVDATAARSCFLMLKIVLR S V+VVFSGA ++QALLRSHGVI D+DPVF+SLDTALEW EE +L G GS+NE G G P + + E A FLGDHE YY RA +LRR+SS + + + +N LV VGDVGSLQ ILEDYLEVDRY+ PE V SVL EA+ FFRQEHV AG V+ D P +K++FIG+GSVELQI G+ G +R KVC+GGTFGEVGF+L+TPQAFRA+AREPCHLHTLDR GMA MQ +NPGLC+LVQ AV+KSICLAAS+S+ESAH GPVD
Sbjct: 1 MMPAEYLVCLATFCSIQAWGVEKGMVAGLVLAALSFTVTYAQ---------VPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPYTGAPATGLYGNV---YDDSNRSTRTVGNPQKQLQQQQSYLETAALFKPSGEGTIAASAMNPRGDILSPVFNRSGAVYRSSSXXXXXXXXXXXXXXXXXXXXXXXVLPGSSPRRWRSPREARSQSLREHTSTSXXXXXXXSSQGISSPLAQSLARTRSVGGTTTTXSTGIPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANGSSRHDGGSGGANFSVPTRETTGYGAMEEG------GAGGDGGVXXXXGGATGVRVRHSRGASLG-EEQGVG---EGAVQAYMSLWANGGGSFADSPGLTGMTGGGDSSPGFSGRMARSCSVASLLPASEERTRRVILDFSNVVGVDATAARSCFLMLKIVLRTSGVDVVFSGATREVQALLRSHGVITDDDPVFNSLDTALEWSEEMMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLAGSENEKGEGEEGRP--------------ATAVPSPEAEAAVFLGDHEDYYLRAGTLRRQSSFRTQISDRALDNPLV-VGDVGSLQSILEDYLEVDRYQAPEGVRSVLGEAKSFFRQEHVAAGAVLADNGNPSSASSSAEKVYFIGSGSVELQIPGKYG-PRRLQKVCAGGTFGEVGFFLRTPQAFRAVAREPCHLHTLDRAGMAAMQHQNPGLCILVQKAVMKSICLAASLSIESAHLGPVD 805
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D7FMW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW9_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 6.730e-136 Identity = 327/763 (42.86%), Postives = 399/763 (52.29%), Query Frame = 1
Query: 376 MMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTVQGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKDGLNLRSEATLSPSRGGRFNGQF-LATKLSQDNGSGSWSMNNVGSAASTEAVERTPLADRSVHISDCGGAAGAS-AVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATG----RPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVP------PDKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
MM AEY+VCLAT+ +IQA G+EKG++VG VLAAL FT+TYAQ VPTVM AR+KAS VMRTFEERVIL+AH++Q V + A V + G I+S R + Y + T G A+S+ + S +L RS + G+ G+ P GG F A L + E + LA+ S GG GA +V Y A+++G G A G RPR S E+ +GAVQ YM LWANGGGS DSP + R R S VSLLP E+RTRRV+LDFSNVVGVDATAARSCFLMLKIV+R S V VVF+GA +QALLRSHGVI D+DPVF+SLDTALEW EE +L D L +LTA+ ++ +GGG P + +G A E FL DH Y A +LRRR+S + + + +N LV VGDVGSLQ ILEDYLEVDRY PESV SV EA+ FFRQEHV AG V++D P P+K++FIG+GSVE QI GE G +R KVC+GGTFGEVGF+L+TPQAFRA+AREPCHLHTL+R GM MQ +NPGLC+LVQ AV+KSICLA S+S+ESAH PVD
Sbjct: 1 MMPAEYLVCLATYGSIQAWGVEKGLVVGLVLAALGFTVTYAQ---------VPTVMKARVKASTVMRTFEERVILKAHQEQAVVLELQPSGEGTTAAGVI-------NPRGDILSPVFNR-----SGAVYRSSSATAXXXXXXXXXXXXXPMWTXXXXXGG--ASSQGISSPLAHSLARTRS--VGGTCTGV---------PGAGGGRGRPFHRAGGL----------LPGASERLEAEQESQAVLANDSTRHD--GGRGGAHFSVPAQETTDYEAMEEGGA----GGDXXXXXXXXXXAAVGVRARRPRGASLGEEQR----VGEGAVQEYMSLWANGGGSFVDSPGLTGRTGGGDSSPGFSGRETRCPSVVSLLPASEERTRRVILDFSNVVGVDATAARSCFLMLKIVMRTSGVHVVFAGATRTVQALLRSHGVITDDDPVFNSLDTALEWSEEMML-----DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----ALTAQAQGRHAAEEPAEGGGGLPPVESKNEEGEGEQGRPGAAPPSPAEAVVFLEDH---YLSAGTLRRRNSFRTQISDRALDNPLV-VGDVGSLQFILEDYLEVDRYHAPESVRSVFGEAKSFFRQEHVAAGAVLVDHDSPSSSSSSPEKVYFIGSGSVEPQIPGECG-PRRLQKVCAGGTFGEVGFFLRTPQAFRAVAREPCHLHTLNRAGMVAMQHQNPGLCILVQKAVMKSICLAKSLSIESAHLRPVD 695
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ2_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ2_ECTSI) HSP 1 Score: 371 bits (953), Expect = 1.600e-111 Identity = 260/574 (45.30%), Postives = 328/574 (57.14%), Query Frame = 1
Query: 1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSK--------------------CLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKD----------GLNLRSEATLSPSRGGRFNGQFLATKLSQD-------NGSGSWSMNNV-------------------GSAASTEAVERTPLADRSVHISDCGGAAGASAVTHARGLR-YGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWE-RSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNV 1494
+V+PN LAM VVAFSS LD+AAIEM M KPLDFN+EL+TVGWSNVISGL GGFTGSYIFSQTIFN+RAGVDTR A A S + L+A AASPA++IS+LP+ FFGSLL+L+AVDLMVEWLW+ARL+MM AEY+VCLATF +IQA G+EKG++ G VLAALSFT+TYAQ VPTVMTAR+KAS VMRTFEERVIL+AH++QTV QGYIFFGSA KIL+DVK+RI+WG D + GI YD + T G+ + + +N GD+ A+ S + + SS L GS +LR + S + G + Q +++ L+Q G+ + + V G++ E ++ P + GG+ GA+ AR YGA+++G + G G SG + RPR S E R G +GAVQ YM LWANGGGS+ DSP + R RSSS VSLLP ++RTRRV+LDFSNV
Sbjct: 297 RVVPNLLAMIVVVAFSSCLDIAAIEMEMAKPLDFNEELQTVGWSNVISGLFGGFTGSYIFSQTIFNLRAGVDTRAASAVSFVMLLAVAASPASVISFLPRCFFGSLLILVAVDLMVEWLWQARLKMMPAEYLVCLATFSSIQAWGVEKGMVAGLVLAALSFTVTYAQ---------VPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPNAGAPATGIFGNV---YDDSNLSTRTVGNPQQQQSYLETAALVKPSSEGIIAAGAMNPRGDILSPVFNKSGAAYRSSSATAAAEAPAASSVLPGSSPLHWRSPRQARRQSLREHTSTSSQQQGGASSQGISSPLAQSLARTRSVGGTTTATSTGVPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANASSRHYGGSGGANFSVPARETTGYGAMEEGGAGGD-GGVGSSGRATAGVRVR-RPRGTSLGEEPRVG-----EGAVQAYMSLWANGGGSLADSPGLTGMTGGGDSSPGFSGRMARSSSVVSLLPASDERTRRVILDFSNV 851
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ4_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ4_ECTSI) HSP 1 Score: 334 bits (856), Expect = 6.930e-98 Identity = 249/572 (43.53%), Postives = 311/572 (54.37%), Query Frame = 1
Query: 1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISE--STLFTRR------------------------SSPLNGSKDGLN--LRSEATLSPSRGGRFNGQFLATKLSQD-------NGSGSWSMNNV-------------------GSAASTEAVERTPLADRSVHISDCGGAAGASAVTHARGLR-YGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWE-RSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMN--------------RYRRSSSAVSLLPRPEQRTRRVVLDFSNV 1494
+V+PN LAM VVAFSS LD+AAIEM M KPLDFN EL+TVGWSNVISGL GGFTGSYIFSQTIFN+RAG ++IS+LP+ FFGSLL+LIAVDLMVEWLW+ARL+MM AEY+VCLATF +IQA G+EKG++ G VLAALSFT+TYAQ VPTVMTAR+KAS VMRTFEERVIL+AH++QTV QGYIFFGSA KIL+DVK+RI+WG D + GI YD + T G+ + + L +S A+ M + S +F R SSPL+ + LR + S + G + Q +++ L+Q G+ + + V G++ E ++ P + GG+ GA+ AR YGA+++G + G G SG + RPR S E R G +GAVQ YM LWANGGGS DSP + R RSSS VSLLP E+RTRRV+LDFSNV
Sbjct: 284 RVVPNLLAMIVVVAFSSCLDIAAIEMEMAKPLDFNGELQTVGWSNVISGLFGGFTGSYIFSQTIFNLRAG----------------------SVISFLPRCFFGSLLILIAVDLMVEWLWQARLKMMPAEYLVCLATFCSIQAWGVEKGMVAGLVLAALSFTVTYAQ---------VPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPNAGAPATGIFGNV---YDDSNHSTRTVGNPQQQQSYLETAALVKPSSEGTIAAGAMNPRGDILSPVFNRSGAVYRSSSXXXXXXXXXXXSVLPGSSPLHWRSPARSQSLREHTSTSSQQQGEPSSQGISSPLAQSLARTRSVGGTTTATSTGVPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANESSRHDGGSGGANFSVPARETTGYGAMEEGGAGGD-GGVGSSGRATAGVRVR-RPRGTSLGEEPRVG-----EGAVQAYMSLWANGGGSFADSPGLTGMTGGGDSSPGFSGRMARSSSVVSLLPASEERTRRVILDFSNV 814
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: D8LSJ3_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ3_ECTSI) HSP 1 Score: 311 bits (798), Expect = 5.680e-95 Identity = 186/357 (52.10%), Postives = 217/357 (60.78%), Query Frame = 1
Query: 1534 MLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVP------PDKLFFIGAGSVELQIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVD 2586
MLKIVLR S +VVFSGA K+QALLRSHGVI D+DPVF+SLDTALEW EE +L EG+G + A A + ETA FLGDHE YY RA +LRRRSS + + + +N LV VGDVGSLQ ILEDYLEVDRY+ PESV SVL EA+ FFRQE V AG V+ D P P+K++FIG+GSVELQI G+ G +R KVC+GGTFGEVGF+L+TPQAFRA+AREPCHLHTLDR GMA MQ +NPGLC+LVQ AV+KSICLAAS+S+ESAH GPVD
Sbjct: 1 MLKIVLRTSGADVVFSGATRKVQALLRSHGVITDDDPVFNSLDTALEWSEEMMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-------EGEG-EQGRPAAAAPEAEAETAVFLGDHEDYYLRAGTLRRRSSFSTQISDRALDNPLV-VGDVGSLQSILEDYLEVDRYQAPESVRSVLGEAKSFFRQERVAAGAVLADHGNPSSSSSSPEKVYFIGSGSVELQIPGKCG-PRRLQKVCAGGTFGEVGFFLRTPQAFRAVAREPCHLHTLDRTGMAAMQHQNPGLCILVQKAVMKSICLAASLSIESAHLGPVD 347
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A7R9UBE4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE4_9STRA) HSP 1 Score: 323 bits (827), Expect = 1.580e-91 Identity = 300/933 (32.15%), Postives = 422/933 (45.23%), Query Frame = 1
Query: 1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQ------TVQGYIFFGSAAKILADVKERIIW--GGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISESTLFTR---RSSPLNGSKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSM-------NNVGSAASTEAVERTPLADRSVHISDCGGAAGASAVTHA---------RGLRYGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMNRYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADN-DPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYLEVDRYKVPESVYSVLR------EARRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVEL-----------------------------------QIIGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISMESAHFGPVDKS 2592
++IP+++AM VVAFSSSLDVAAIEM +G+ LD+N+EL TVG SN +SGLTGG+TGSYIFSQTIFN+R GV +R+ G + A P + ++Y+PK FFGSLL +IAVDL EWL AR +M RAEY V +ATFVA+ ACG+E G+++G VLA FT+ YAQ VP V ++ + S + RTF+ERVIL ++QGYIFFGSA +LADVK RI W GG + GI SP + + V P T T G A +G I+ ++ R + SP + SE LS G R S +GSG WS + G AS + R P + HI+ GGAAG + RG +YG R +G+ S V+ GR E S + + G ++ + G GS T S + V+LDF V G+DATAAR+CFL+L+ +LR + V+VV++ ++ LL +HGVI ++ DPVF+ ++ ALEW EEK+L T LR++ + S ++ P L+L + + + + D PG D G G + A AS ++ D E+ Y S S D S G L+ IL DY+ + SV+ L+ ++F E V+ + D+L+ + G VEL +I + +R K+ GG GEVGF+L PQ FRA+ R PC L + R A+M R P L +++Q + L CL + ++ H P + S
Sbjct: 269 QIIPHWIAMFLVVAFSSSLDVAAIEMELGESLDYNRELMTVGISNFLSGLTGGYTGSYIFSQTIFNLRVGVQSRITGYIITGVELIIFAVPFSAVAYVPKCFFGSLLTMIAVDLCYEWLILARHKMARAEYFVNIATFVAVNACGVELGMVIGIVLAMACFTLAYAQ---------VPGVKSSFRRTSLITRTFQERVILDTAMHDGIMQIFSLQGYIFFGSAVNLLADVKSRIRWPDGGPASLGIERVDSPPTVPK---VPSSPSLYTEPTDGK--------------FATAG----------IAAMPVYNRGGGKGSPSKAGRMHERRMSERDLSEEHGER-----RRLPRSSSHGSGFWSFMSPSTWDRDGGDQASNDKHHR-PESRMDAHIASWGGAAGQAMSERTPLLASRAAQRGSKYGPSGSPASRRRTNGSSQSRVM-----TNGRVDEESPSFNGARVGLEIESNASSDDVARTVGLGSSTTSVKAW---------------------VILDFEKVKGIDATAARACFLILRKLLRTAGVQVVYAAVPDHVKLLLEAHGVINESEDPVFEQVEEALEWCEEKLL----TVDGLRYQASSSAL------------ALSTSTSAPDLTL-----FKDKVRNLRLHRLHQRLSEDDPWMSRPGHDPRGSG---EAPYAAASVKE--------DIEEKYGMDRS---HPSSDDLFLSGSGRT-------WEDLRAILFDYIVENVDHELSSVFRGLKYELTEDALTKYFSTEIAPKNKVLFRRGEASDRLYVLRQGEVELLAPMTVEGSTPANGSPNSGRPPDANGTDAMEHRPLKIPISVSKERRIQKITDGGVCGEVGFFLCRPQDFRAVTRTPCQLWNMTRNDFAEMCRNRPTLALMLQVSALHR-CLNCARALRQTHRSPPNPS 1090
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A7S1UB31_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB31_9STRA) HSP 1 Score: 307 bits (787), Expect = 2.650e-86 Identity = 295/915 (32.24%), Postives = 422/915 (46.12%), Query Frame = 1
Query: 1 KVIPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQ--AHRQQT----VQGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGI--------SRGTCVAYDPDTKTPTTFGSAKDSKCLNGN------GDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKDGLNLRSEATLSP----SRGGRFNGQFLATKLSQDNGSGSWSMNNVGSAASTEAVERTPLADRSVHISDCGGAAGASAVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMG----ATGRPREVSFDWERSGAGSTVDGAVQTYMPLWANGGGSVTDSPEMNRYRRSSSAVSLLPRPEQR--------TRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIAD-NDPVFDSLDTALEWLEEKILKERKTDT---------LLRHRRVVGGTGDSGNR---RPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAA-FLGDHEKYYSRAESLRRRSSMDARTASKGGENNLVPVGDVGSLQCILEDYL------EVDRYKVPESVYSVLREA--RRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVELQIIGELGYS-------KRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAAS 2550
++ N++AM VVAFSSSLDVAAIEM +G PLD+N+EL TVG SN SGL+GG+TGSYIFSQTIFN+R GV +R+ G + A P ++++Y+PK FFGSLL LI VDL EWL EAR +M EY VC+ATFVA+ G+E G+LVG VLA +FT YA+ +PTV T + S RTF+ER+IL H Q +QGYIFFGSA +LADVKER+ G + +S R + S A DP T +A GN G + + P ++ + + SP ++P +RGG GQ L+ + S GSG N S + + E TPL + A+ A+G + RE S P+ +G GR + R+ +GST G+ + G PEM SAV+ V+LDF V GVDATAAR+CFL+L+ +L++S V++V++ + LL +HGVI + DP+FD+L+ ALEW EE++L + D+ L + + V N+ R RR + D P WE L R E D + A + +E AA L H SS + + K L+ +L +Y+ EV R V +++ S L E +++F + V+ G+ + + L+ + G VEL + + G +R K+ GG GEVGF+L PQ FRA++R C + + RE +AKM ++NP L +L+Q+A+L+S+ L+ S
Sbjct: 269 RIFVNWIAMFFVVAFSSSLDVAAIEMELGTPLDYNQELMTVGISNFCSGLSGGYTGSYIFSQTIFNLRVGVRSRITGFIIAGIEMVVFALPFSVVAYVPKCFFGSLLTLICVDLCYEWLIEARHKMAATEYFVCIATFVAVNIMGVEGGMLVGIVLAMATFTFGYAR---------LPTVKTNIKRNSLTTRTFQERIILDKATHEGQMQIFQLQGYIFFGSAVNLLADVKERVRLPDRNIGSVRPTQSFRPLRQRDRSYSSPNLDAAVDPKNVHAQTEVAAMPVYNRGGNLHYEEGGSPNLRRMRSNSFGSPQRALKQQNMLIPGGSPT------------TNVAPMPIYNRGG---GQPLSNRTSPS-GSGVRGRNRSYSFGTMK--ESTPLLS-------------SGALGEAQGFTH--------SREVSEDSSPIFSPMQLGLDLMGLGRRQGSEASRSRTESGSTAMGSPNPKRAIMDLESG----IPEME-----VSAVNGFSHKSSMGDDDGIGIKSWVILDFEKVSGVDATAARACFLVLRKLLQKSGVQLVYAAVPDHVMLLLNAHGVIDEAEDPLFDTLEEALEWCEERLLALSEGDSGSSSHMPGHLRKAKSSVPDLTAYKNKVQGRRLRRLRKRLSQDDP----------WEPLKTR---------EED------------------EPEDASLNVIAIEGAAPELEGHP------------SSDELFLSGKDASWK--------DLRVLLYEYINEGSDGEVGR--VMKNLRSELNETMLKKYFEVKIVEEGITLFQRGEASSCLYILRQGEVELLMCDDAGTGDGVAVKERRIQKISDGGVAGEVGFFLCRPQDFRAVSRTHCQMWYMTRESLAKMCQKNPTLAMLLQHAILRSLSLSIS 1067
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: W7TKR3_9STRA (Sulfate permease family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKR3_9STRA) HSP 1 Score: 295 bits (754), Expect = 4.120e-82 Identity = 269/884 (30.43%), Postives = 390/884 (44.12%), Query Frame = 1
Query: 7 IPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWGGDQTGGIVSAKSPRGISRGTCVAYDPDTKTPTTFGSAKDSKCLNGNGDLPIAASGPRAASKPMESISESTLFTRRSSPLNGSKDGLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVGSAASTEAVERTPLADRSVHI--SDCGGAAGASAVTHARGLRYGAVQDGDREREKSGTGMSGVVPIPMGATGRPREVSFDWERSGA-GSTVDGAVQTYMPLWANGGGSVTDSPEMNRYRRSSSAVSLLPRPEQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLG--DHEKYYSRAESLRRRSSMDARTASKGGENN--LVPVGDVGSLQCILEDYLEVD--------------RYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVELQI--------IGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISM 2559
+P+++A+T VVAFSSSLDV AIEM +PL+++ EL+ +G SN++SGLTGGFTGSYIFSQTIFN+R G+ TR+ AT A P ++I+++P+ FFG LLVLI DLM+EWLW +R +MM EY V +ATF+AIQ +E G+ VG VLA ++FT++YA+A P V+ R++ S V+RTFEER IL A+ + + +GY+FFGSA KIL ++KE ++ G +S + +S + + GS D R+ S+ SS L+ + R + T S G + + L + WS N DR V +DC R G + DR+ + S P P A R+VSF + A GSTV P+ R R ++ DFS VVG+DATAARSCFLMLK +L+ + + ++F+ I+ LLR HGV+ + D VFDS+D ALE+ EE++L+ SA ++ A LG H +Y+ RRS +R A K + L L+ IL DYLEV KV + VL + +F + G + DKL+FI G +EL+ +G+ +R K+ +GGT GE+GF+LK PQ F A+A PC ++ L R + ++ ++N L ++ AV+KSI LA+S ++
Sbjct: 324 VPSWVALTLVVAFSSSLDVTAIEMEKKQPLEYDYELQMIGLSNLVSGLTGGFTGSYIFSQTIFNLRRGITTRVCSATIASIEFLAFLLPVSLIAFVPRFFFGGLLVLIGTDLMLEWLWMSRKKMMAPEYAVTVATFLAIQVTNIEVGMGVGVVLAMVAFTVSYAEA---------PVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVL-----AGHAMSRRQQARVSEQERNEMEVEEHR----GSTTD-----------------RSHSR------------TSSSSLSAALAAAEFRGDGTKS--HVGNQRSELVDFYLRE------WSEN-----------------DRHVEFGQADC------------RSCSRGRI---DRDSRMATVAPSLPCPPPSSA----RKVSFSSSPAQASGSTV---------------------------------------PQNRIRWLIFDFSQVVGIDATAARSCFLMLKSLLKGAHIRLIFASPGPVIERLLRGHGVLDEEDSVFDSVDEALEYCEEELLQ--------------------------------------------------------------------------------------------SAAELSDADLLGLSRHPSFYAAV----RRSRRLSRRAPKCSRRDKLLFEAQKALDLESILADYLEVAVEEGIDTDDGEEGADAKVNHQPHRVLAQ---YFEEASFQPGECLFAGGEASDKLYFIRKGVIELRAPTISDNRGLGQW-QQQRLQKISAGGTVGELGFFLKRPQIFTAMATTPCVVYCLTRPRLVELAKDNSKLACVLIFAVIKSIALASSYAI 977
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Match: A0A4D9DC98_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC98_9STRA) HSP 1 Score: 273 bits (698), Expect = 2.170e-73 Identity = 299/1101 (27.16%), Postives = 437/1101 (39.69%), Query Frame = 1
Query: 7 IPNFLAMTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYIFSQTIFNMRAGVDTRLAGATSCICLVAAAASPANMISYLPKSFFGSLLVLIAVDLMVEWLWEARLRMMRAEYMVCLATFVAIQACGLEKGILVGFVLAALSFTITYAQASNSKKLLQVPTVMTARMKASKVMRTFEERVILQAHRQQTV----QGYIFFGSAAKILADVKERIIWG---GDQTGGIVSAKSPRGISRGTCVAYDPD---TKTPTTFGSAKDSKCLNGNGDLP-------------IAASGPRAASKPMESISESTLFTRRSSP------------------LNGSKD----------GLNLRSEATLSPSRGGRFNGQFLATKLSQDNGSGSWSMNNVGSAASTEAVER--TPLADRS-VHISDCGGAAGASAVTHARGLRYGAVQDGDREREKSGT----GMSGVVPIPMGATGRPRE-----------------------------------------------------VSFDW--------------------------------------------ERSGA------GSTVDGA----------------------------------VQTYMPLWANGGGSVT---------DSPEMNRYRRSSSAVSLLPRP-----------------------EQRTRRVVLDFSNVVGVDATAARSCFLMLKIVLRRSAVEVVFSGANGKIQALLRSHGVIADNDPVFDSLDTALEWLEEKILKERKTDTLLRHRRVVGGTGDSGNRRPTRRASFSGASDPPPLSLPWPLQSWESLTARGTMTIGSQNELDGGGNGNPGDDCEGKGCDSDTSQALASARKVETAAFLG--DHEKYYSRAESLRRRSSMDARTASKGGENN--LVPVGDVGSLQCILEDYLEV-----------DRYKVPESVYSVLREARRFFRQEHVDAGMVIMDKTVPPDKLFFIGAGSVELQI--------IGELGYSKRFLKVCSGGTFGEVGFYLKTPQAFRAIAREPCHLHTLDREGMAKMQRENPGLCVLVQNAVLKSICLAASISM 2559
+P+++A+T VVAFSSSLDV AIEM +PL+++ EL+ +G SN++SGLTGGFTGSYIFSQTIFN+R G+ TR+ AT A P ++I+++P+ FFG LLVLI DLM+EWLW +R +MM EY V +ATF+AIQ +E G+ VG VLA ++FT++YA+A P V+ R++ S V+RTFEER IL A+ + + +GY+FFGSA KIL ++KE ++ G G G + G PD P F S + G+G+ IAAS P +P + T R P +NG ++ G + T S S G F G +SQ NG +G A+++ V TP+ R V + G A+ SA++ R + +G+ E+ T G G+ A GRPRE VS+D ERS GST D + V Y+ W+ V ++R R ++ LP P + R R ++ DFS VVG+DATAARSCFLMLK +L+ + + ++F+ I+ LLR HGV+ + D VFDS+D ALE+ EE++L+ SA ++ A +G H +Y+ RRS +R A K + L L+ IL DYLEV +R + + R ++F + G + DKL+FI G +EL+ +G+ +R K+ +GGT GE+GF+LK PQ F A+A PC ++ L R + ++ ++N L ++ AV+KSI LA+S ++
Sbjct: 296 VPSWVALTLVVAFSSSLDVTAIEMEKKQPLEYDYELQMIGLSNLVSGLTGGFTGSYIFSQTIFNLRRGITTRVCSATIASIEFLAFLLPVSLIAFVPRFFFGGLLVLIGTDLMLEWLWMSRKKMMAPEYAVTVATFLAIQVTNIEVGMGVGVVLAMVAFTVSYAEA---------PVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVLAGHASGLPETGEREEEEEAEADIGGEGGVGPDGAEAMGPLPFSSTSAAMLFRGSGERTGPKARRERQGKSSIAASAPPCTGRPNPFLGR-VRSTPRLVPDVVGRDRNEAKPVGEFPVVNGKREKGGRDAEEGPGHTKPQQLTSSASGRGGFPGI-----VSQSNGRSLGGSGPIGEASASSCVPDVLTPVYHRGGVWVETKGNASSGSALSWRRDSAEEELGEGEDSEEEDWTMRDEGCQGLNEPHESARGRPREEARDRSGPWMCGREMGRDSPLQDEIGSEAAPLLSCDHSHVSQHHAPSQCSGMAVSYDTAQDFMDSLENFLSPSAESSPDATSRSAPSSPAVSRRQQARVSEQERSEMELEEHRGSTTDRSHSRTSSSSLSAALAAAECRGDGTKSHVGNQSSELVDFYLREWSEDDRHVEFGQADCRSCSRGSIDRESRMATVAPSLPCPPPSSARKVSFPSSPAQASGSTVPQNRIRWLIFDFSQVVGIDATAARSCFLMLKSLLKGAHIRLIFASPGPVIERLLRGHGVLDEEDSVFDSVDEALEYCEEELLQ--------------------------------------------------------------------------------------------SAAELSDADLIGLSRHPSFYAAV----RRSRRLSRRAPKCSRRDKLLFEAQKALDLESILADYLEVAVEEGIDTDDGERGADAKVNHQPHRVLAQYFEEASFQPGECLFAGGEASDKLYFIRKGVIELRAPTISDNRGLGQR-QQQRLQKISAGGTVGELGFFLKRPQIFTAMATTPCVVYFLTRPRLVELAKDNSKLACVLIFAVIKSIALASSYAI 1284 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5877.13370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5877.13370.1 >prot_H-elongata_contig5877.13370.1 ID=prot_H-elongata_contig5877.13370.1|Name=mRNA_H-elongata_contig5877.13370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=864bp MTAVVAFSSSLDVAAIEMGMGKPLDFNKELKTVGWSNVISGLTGGFTGSYback to top mRNA from alignment at H-elongata_contig5877:521..10620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5877.13370.1 ID=mRNA_H-elongata_contig5877.13370.1|Name=mRNA_H-elongata_contig5877.13370.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=10100bp|location=Sequence derived from alignment at H-elongata_contig5877:521..10620+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5877:521..10620+ >mRNA_H-elongata_contig5877.13370.1 ID=mRNA_H-elongata_contig5877.13370.1|Name=mRNA_H-elongata_contig5877.13370.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5184bp|location=Sequence derived from alignment at H-elongata_contig5877:521..10620+ (Himanthalia elongata Himel1 dioecious)back to top |