mRNA_H-elongata_contig58713.13364.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: A0A6H5L4K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4K4_9PHAE) HSP 1 Score: 179 bits (453), Expect = 1.000e-52 Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPE--EDHHTQLAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
QVVSKSCKVVPVMLVGKF+HGKSYPWVEY EAVAI +GVS+FSLSQ + E+ HT L G+F +A YL CDSFTSQWQDRIFKKHKIDQ+QMMFGVNCFSILFT +LL+ G
Sbjct: 184 QVVSKSCKVVPVMLVGKFVHGKSYPWVEYLEAVAIAMGVSLFSLSQSDGHKDGEETHTNLYGIFFIASYLACDSFTSQWQDRIFKKHKIDQYQMMFGVNCFSILFTTSSLLWNG 297
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: A0A836CQP3_9STRA (Solute carrier family 35, member B1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQP3_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.520e-45 Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPEED--HHTQLAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
QVVSKSCKV+PVMLVGKF+H KSYPW+EY EAV I VGVSMFSL++ A +++ TQ G+ LVAMYL CDSFTSQWQDRIF+ +KIDQ+QMM G+N FSI FT LL+ G
Sbjct: 162 QVVSKSCKVIPVMLVGKFVHHKSYPWIEYIEAVGITVGVSMFSLNESSAKDDEDARQTQFFGLLLVAMYLTCDSFTSQWQDRIFQTYKIDQYQMMLGINMFSIFFTTVALLWSG 275
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: A0A7S2V172_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V172_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.250e-38 Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQK-----KAPEEDHHTQLAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
QVVSKSCKV+PVMLVGK +H K+Y WVEY+EA I +GVS+F+L+Q+ K + + T G+FL+AMYL CDSFTSQWQ R++ + ++QFQMM GVNCFS+ FT+ TLL G
Sbjct: 169 QVVSKSCKVIPVMLVGKMVHRKTYDWVEYSEAFFITLGVSIFTLAQQTGGAHKEGDAEKVTTAVGVFLLAMYLTCDSFTSQWQSRVYSSYHVNQFQMMLGVNCFSVFFTVVTLLQTG 285
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: A0A6S9KLE1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KLE1_HETAK) HSP 1 Score: 139 bits (350), Expect = 2.700e-37 Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPEEDH-HTQLAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
QVVSKSCK++PVMLVGKF+HGKSYP EY EA+ I +GVS+F+LS+K+ P + + G+ L+A YL CDSFTSQWQ ++++K+ ++QFQMM GVN S+ FTL TLL G
Sbjct: 196 QVVSKSCKIIPVMLVGKFVHGKSYPIAEYLEALVITIGVSLFTLSEKQDPGKGAAESTTLGIMLLAFYLCCDSFTSQWQSKVYEKYSVNQFQMMAGVNTCSVFFTLATLLKTG 308
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: A0A6V2X730_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2X730_EMIHU) HSP 1 Score: 135 bits (340), Expect = 5.310e-36 Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPEEDHHTQLAGMFLVAMYLVCDSFTSQWQDRIFKKHK-IDQFQMMFGVNCFSILFTLGTLLYVG 336
Q +SKS KV+PVML+GK ++ KSY W+EY EA+ I GVS+FS S+K AP +D T+L G ++A+Y+ DSFTSQWQ +++K H +DQFQMMFGVN +SILFTL LL G
Sbjct: 177 QTLSKSTKVIPVMLMGKLLNKKSYKWIEYVEALMISFGVSLFSFSEKSAPGDDKTTELLGYAMIALYIGADSFTSQWQTKVYKAHPGVDQFQMMFGVNTWSILFTLAALLASG 289
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: F0YSJ6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YSJ6_AURAN) HSP 1 Score: 126 bits (316), Expect = 8.370e-34 Identity = 59/114 (51.75%), Postives = 82/114 (71.93%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQK--KAPEEDHHTQLAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
Q + KS KV+PVMLVGKF H K+YPW+EY EAV I +GV++F L++K K + + G+ ++++Y+ CDSFTSQWQDR++K + +DQ+ MMFGVN FS+ FT LL G
Sbjct: 28 QTLFKSSKVIPVMLVGKFFHKKNYPWIEYVEAVGITLGVALFMLTEKAKKGGGDGAGDSVLGVLILSVYVFCDSFTSQWQDRVYKTYHVDQYAMMFGVNFFSLAFTACNLLATG 141
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: W7TWN3_9STRA (Solute carrier family 35 member b2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWN3_9STRA) HSP 1 Score: 130 bits (328), Expect = 9.400e-34 Identity = 64/115 (55.65%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPEEDHH---TQLAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
QV+SKS K++PVMLVG+ +H +SYPW EY +A I +GV++FSL++KK P+ H G L+AMYL+CDSFTSQWQD++FKK + QFQMM GVN SI+FT +LL G
Sbjct: 246 QVLSKSSKIIPVMLVGRLLHRRSYPWAEYVDAALITLGVTIFSLNEKK-PKAGHDGGADSTLGYILLAMYLMCDSFTSQWQDKVFKKFHVSQFQMMLGVNLCSIIFTGASLLQTG 359
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: A0A8J2SJ07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ07_9STRA) HSP 1 Score: 126 bits (317), Expect = 5.890e-33 Identity = 59/115 (51.30%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPEEDHHTQ---LAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
Q + KS KV+PVMLVGKF H K+YP +EY EA+ I GV++F L++K E + + G+ ++ +Y+ CDSFTSQWQDR++K +++DQ+QMMFGVN FS+LFT LL+ G
Sbjct: 132 QTLFKSSKVIPVMLVGKFFHKKNYPLIEYIEAIGITAGVALFMLTEKAKKEHASGVEGDTVLGILILCVYVFCDSFTSQWQDRVYKTYRVDQYQMMFGVNFFSLLFTSMNLLWTG 246
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: F0XWW3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWW3_AURAN) HSP 1 Score: 126 bits (316), Expect = 2.070e-31 Identity = 59/114 (51.75%), Postives = 82/114 (71.93%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQK--KAPEEDHHTQLAGMFLVAMYLVCDSFTSQWQDRIFKKHKIDQFQMMFGVNCFSILFTLGTLLYVG 336
Q + KS KV+PVMLVGKF H K+YPW+EY EAV I +GV++F L++K K + + G+ ++++Y+ CDSFTSQWQDR++K + +DQ+ MMFGVN FS+ FT LL G
Sbjct: 534 QTLFKSSKVIPVMLVGKFFHKKNYPWIEYVEAVGITLGVALFMLTEKAKKGGGDGAGDSVLGVLILSVYVFCDSFTSQWQDRVYKTYHVDQYAMMFGVNFFSLAFTACNLLATG 647
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Match: A0A0M0JK36_9EUKA (Adenosine 3-phospho 5-phosphosulfate transporter 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JK36_9EUKA) HSP 1 Score: 121 bits (303), Expect = 4.430e-31 Identity = 59/109 (54.13%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 1 QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPEEDHHTQLAGMFLVAMYLVCDSFTSQWQDRIFKKH-KIDQFQMMFGVNCFSILFTLGTL 324
Q +SKS KV+PVML+GK ++ KSYPW +Y EA I +GVS+FS S+ K P+ H T+L G+ L+ MY+ DSFTSQWQ R++K + +DQFQMMF VN +S+ T TL
Sbjct: 117 QTLSKSTKVIPVMLMGKLLNKKSYPWRDYGEAALISIGVSLFSFSESK-PKGSHTTELLGVLLLVMYVTADSFTSQWQSRVYKANPNVDQFQMMFAVNMWSLAMTFITL 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58713.13364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58713.13364.1 >prot_H-elongata_contig58713.13364.1 ID=prot_H-elongata_contig58713.13364.1|Name=mRNA_H-elongata_contig58713.13364.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp QVVSKSCKVVPVMLVGKFIHGKSYPWVEYAEAVAIGVGVSMFSLSQKKAPback to top mRNA from alignment at H-elongata_contig58713:615..1457+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58713.13364.1 ID=mRNA_H-elongata_contig58713.13364.1|Name=mRNA_H-elongata_contig58713.13364.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=843bp|location=Sequence derived from alignment at H-elongata_contig58713:615..1457+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58713:615..1457+ >mRNA_H-elongata_contig58713.13364.1 ID=mRNA_H-elongata_contig58713.13364.1|Name=mRNA_H-elongata_contig58713.13364.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=690bp|location=Sequence derived from alignment at H-elongata_contig58713:615..1457+ (Himanthalia elongata Himel1 dioecious)back to top |