prot_H-elongata_contig58703.13362.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58703.13362.1
Unique Nameprot_H-elongata_contig58703.13362.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length39
Homology
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 6.040e-14
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    2 VRGKPLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            VRGKPLEWWRVKAR+YP LASLARRVLCIPA  AQSE
Sbjct:  476 VRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSE 512          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 3.530e-7
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    6 PLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            PL+WWRV+  D+P LA+LARRVL IPA+ A+SE
Sbjct:  223 PLDWWRVRCADFPHLANLARRVLAIPATQAESE 255          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: A0A1A8CIX7_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CIX7_9TELE)

HSP 1 Score: 49.7 bits (117), Expect = 9.970e-7
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0
Query:    6 PLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            PLEWW+V A  YP+LASLA+  LCIPA+   SE
Sbjct:   23 PLEWWKVNAYAYPILASLAKAYLCIPATSVPSE 55          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: A0A1A8B7X3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8B7X3_NOTFU)

HSP 1 Score: 49.7 bits (117), Expect = 8.350e-6
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0
Query:    6 PLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            PLEWW+V A  YP+LASLA+  LCIPA+   SE
Sbjct:  252 PLEWWKVNAYAYPILASLAKAYLCIPATSVPSE 284          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 8.510e-6
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    2 VRGKPLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            V   PL+ WR K  +YP+LA+LARRVL IP+S AQSE
Sbjct:  479 VFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSE 515          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: A0A1A7Y149_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7Y149_9TELE)

HSP 1 Score: 47.4 bits (111), Expect = 1.660e-5
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0
Query:    6 PLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            PLEWW+V A  YP+LA LA+  LCIPA+   SE
Sbjct:   75 PLEWWKVHAYAYPILAPLAKAYLCIPATSVPSE 107          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: UPI001CF4EC83 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF4EC83)

HSP 1 Score: 48.5 bits (114), Expect = 1.850e-5
Identity = 19/33 (57.58%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    6 PLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            PLEWWR+   ++P +ASLA++ LCIPA+ A SE
Sbjct:  169 PLEWWRLHQANFPRMASLAKKYLCIPATSAPSE 201          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: A0A8C5C595_GADMO (BED-type domain-containing protein n=10 Tax=Clupeocephala TaxID=186625 RepID=A0A8C5C595_GADMO)

HSP 1 Score: 48.5 bits (114), Expect = 2.180e-5
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 0
Query:    2 VRGKPLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            +   PLEWW+V A  YP+LA LA+  LCIPA+   SE
Sbjct:  611 LNSSPLEWWKVNAYAYPILAPLAKAYLCIPATSVPSE 647          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: UPI00148FC899 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FC899)

HSP 1 Score: 48.5 bits (114), Expect = 2.180e-5
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    4 GKPLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
              PLEWWR+   ++P +ASLA++ LCIPA+ A SE
Sbjct:  569 ANPLEWWRLHQANFPRVASLAKKYLCIPATSAPSE 603          
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Match: A0A8C1LHH7_CYPCA (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1LHH7_CYPCA)

HSP 1 Score: 48.5 bits (114), Expect = 2.180e-5
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 0
Query:    2 VRGKPLEWWRVKARDYPMLASLARRVLCIPASHAQSE 38
            +   PLEWW+V A  YP+LA LA+  LCIPA+   SE
Sbjct:  419 LNSSPLEWWKVNAYAYPILAPLAKAYLCIPATSVPSE 455          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58703.13362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHP9_9PHAE6.040e-1489.19Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JWI1_9PHAE3.530e-766.67Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A1A8CIX7_9TELE9.970e-763.64Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A1A8B7X3_NOTFU8.350e-663.64Dimer_Tnp_hAT domain-containing protein n=4 Tax=No... [more]
D8LCS5_ECTSI8.510e-662.16Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A1A7Y149_9TELE1.660e-560.61Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
UPI001CF4EC831.850e-557.58E3 SUMO-protein ligase ZBED1-like n=1 Tax=Bufo gar... [more]
A0A8C5C595_GADMO2.180e-554.05BED-type domain-containing protein n=10 Tax=Clupeo... [more]
UPI00148FC8992.180e-554.29zinc finger BED domain-containing protein 1-like n... [more]
A0A8C1LHH7_CYPCA2.180e-554.05Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 5..38
e-value: 3.6E-10
score: 39.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58703contigH-elongata_contig58703:3012..3128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58703.13362.1mRNA_H-elongata_contig58703.13362.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58703 2982..3128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58703.13362.1 ID=prot_H-elongata_contig58703.13362.1|Name=mRNA_H-elongata_contig58703.13362.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bp
MVRGKPLEWWRVKARDYPMLASLARRVLCIPASHAQSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf