mRNA_H-elongata_contig5869.13359.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5869.13359.1
Unique NamemRNA_H-elongata_contig5869.13359.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 1.370e-114
Identity = 216/506 (42.69%), Postives = 266/506 (52.57%), Query Frame = 1
Query:  169 AAAQSYPDCDGDTTLLGDALCDFSLNTADCGYDEGDCCECMCVDTSDNVCGSGGG-FFCSDPSAPTNCTSTASPT----LSPTS----------TTVDTS---YPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTC-LEG-LTHDCGAKGDGFDCQDPDVPSDCDSANLAECTGYT-YDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCC-----DDGYCLSCYDPDADCVSVTPSPAVTSDCPYPTW------------------------------------VGDGICDSGNNIEECSWDGGDCCACTCVGSTFXXXXXXXXXXXXXXXXTNTDYSSGRGDDLTSSELYDDLDAPGNM----GTPSPVT----SGEAQTTSFGDQVLGFSGIQIIGIFTLTVFLFCCFGGTI 1476
            A A  YPDC+ DT L+GD++CD   N A+CG+D GDCCEC CVDT D VCG GGG +FC DP AP +C S  SPT     +PTS          T++D S   YP C GY+ HI DGYCDED N AAC +DGGDCCACTC ++  + H+CG   DG+DC+DPDVP DC+ AN A+C G   YD+QDG CDDDLNTA+C +DGGDCCRCTCRDY S                     S CG  GY+CLDP AP+ C T+ PTPSPAA T +P+CEG ++ IG+G+C+Y  NNEECDWDGGDCC        Y    Y  D +  SV+   + TS      W                                     GDG CDS  N  +C WDGGDCC C CV +T+                                  YD LD   +     GTPSP      + +A++T         +  QI+  F+  +  FCCF G +
Sbjct:   56 APAALYPDCEADTALVGDSICDLDFNVAECGFDGGDCCECTCVDTGDQVCGEGGGGYFCVDPDAPQDCASAPSPTPNTPSAPTSSDAIDVTAGPTSLDASDDPYPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDPDVPEDCNLANFAQCEGMNGYDWQDGYCDDDLNTAECGYDGGDCCRCTCRDYDSWGYY-----------------SSCGYYGYDCLDPEAPSSCSTDSPTPSPAAGTDWPECEGYLFEIGDGHCDYYNNNEECDWDGGDCCACTCVSGYYTCGYYTFDCEDPSVSTDCSTTSTLDSDDWYGGYGYYTDDIWDSGDDFYGTYDVYNYGSTACISSYTGDGWCDSFYNHADCEWDGGDCCECDCVDATYDCGVVG----------------------------YDCLDPTSSCSDSPGTPSPTLLDSEARDAESTXXXXXXXSVATWQIVVGFSGVMLAFCCFSGIV 516          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: D7FX76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX76_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 2.920e-92
Identity = 154/284 (54.23%), Postives = 187/284 (65.85%), Query Frame = 1
Query:  169 AAAQSYPDCDGDTTLLGDALCDFSLNTADCGYDEGDCCECMCVDTSDNVCGSGG-GFFCSDPSAPTNCTSTASPT----LSPTS----------TTVDTS---YPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTCL--EGLTHDCGAKGDGFDCQDPDVPSDCDSANLAECTGYT-YDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGY 957
            A    YPDC+ D  L+GD+LCDF +N A+CG+D GDCCEC CVDT D VCG GG G+FC DP AP +C S+ SPT     SPTS          T++D S   YP C GY+ HI DGYCDED N AAC +DGGDCCACTC     + H+CG  GDG+DC+DPDVP DC+ AN A+C     YD+QDG CDDDLNT +C +DGGDCCRCTCRDY+S                     + CG  GY+C+DP AP+ C T+ PTPSPAA T +P+CEG +Y IG+G+
Sbjct:   54 APTALYPDCEADMALVGDSLCDFDVNVAECGFDGGDCCECTCVDTGDQVCGEGGTGYFCVDPDAPQDCASSPSPTPNTPSSPTSSDAIDVTAGPTSLDASDDPYPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGVDADVEHECGLLGDGYDCRDPDVPDDCNLANFAQCEDMNGYDWQDGYCDDDLNTPECGYDGGDCCRCTCRDYNSWGYY-----------------NSCGYYGYDCMDPEAPSSCSTDSPTPSPAAGTDWPECEGYLYAIGDGF 320          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 6.110e-82
Identity = 146/282 (51.77%), Postives = 171/282 (60.64%), Query Frame = 1
Query:  424 YPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTCL----EGLTHDCGAKGDGFDCQDPDVPSDCD-------SANLAECTGYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCCD-----------DGYCLSCYDPDADCVSVTPSPAVTSDCPYPTWVGDGICDSGNNIEECSWDGGDCCACTCVGST 1203
            Y  C GY  HI+DGYCD DLN A C WDGGDCCACTC     E L H CG  GDG+DC DPDVP DC        +    +C  Y Y++QDG+CDD+LNTA+C +DGGDCCRCTCRDY+S                     + CG  GY+C+DP AP+ C T+ PTPSPAA T +P+CEG IY IG+G C+Y  NNEECDWDGGDCC              Y + C DP+A+C   TPSP      PY  W  DG CDS  N E+C WDGGDCCA  C  +T
Sbjct:   64 YLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCLDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAECGYDGGDCCRCTCRDYNSWGYY-----------------TNCGYYGYDCMDPDAPSSCSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYSMDCQDPNANCT--TPSPT-----PYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTT 321          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.060e-78
Identity = 145/282 (51.42%), Postives = 169/282 (59.93%), Query Frame = 1
Query:  424 YPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTCL----EGLTHDCGAKGDGFDCQDPDVPSDCD-------SANLAECTGYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCCD-----------DGYCLSCYDPDADCVSVTPSPAVTSDCPYPTWVGDGICDSGNNIEECSWDGGDCCACTCVGST 1203
            Y  C GY  HI+DGYCD DLN A C WDGGDCCACTC     E L H CG  GDG++C DPDVP DC        +    +C  Y Y++QDG+CDD+LNTA C +DGGDCCRCTCRDYSS                     S CG  GY+C+DP AP+ C T+ PTPSPAA T +P+CEG IY IG+G C+Y  NNEEC WDGGDCC              Y + C DP+A+C   TPSP      PY  +  DG CDS  N E+C WDGGDCCA  C  +T
Sbjct:   64 YLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGADSDEELAHPCGQLGDGYNCLDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQDGVCDDNLNTAACGYDGGDCCRCTCRDYSSWGY------------------STCGYYGYDCMDPDAPSACSTDSPTPSPAAGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSYYYSCSSYSMDCQDPNANCT--TPSPT-----PYCPFASDGYCDSYYNTEDCDWDGGDCCAYGCSSTT 320          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 8.290e-51
Identity = 138/348 (39.66%), Postives = 178/348 (51.15%), Query Frame = 1
Query:  202 DTTLLGDALCDFSLNTADCGYDEGDCCECMCVDTSDNVCGSGGGFFCSDPSAPTNCTSTASPTLSPTSTTVDTSYPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTCLEGLTHDCGAKGDGFDCQDPDVP---SDCDSANLAECTGYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCC--------DDGY-CL--SCYDPDADCVSVTPSPAVTSD----CPYPTWVGDGICDSGNNIEECSWDGGDCCACTC 1191
            DT  +GD  C+   N   C YD GDCCEC C DT +N CG    F C DP+AP  C       +   S TVD    +CE Y   I +G+CD D N   C +DGGDCC CTC E L  D  A  + F C DP+ P    D  + ++ E   +     DG C +DLNT +C +DGGDCC CTC++   D+ XXXX                     + C+DP A    D +           + +CE P+  +G+G+C+   NNE C +DGGDCC        D+ Y C+  SC DP A CV+      VT D    C Y + +G+G CD  NN EEC +DGGDCC+CTC
Sbjct:  215 DTVSIGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRWSSFACIDPAAP--C-------VDDDSFTVDM-IDNCE-YPGGIGNGWCDVDNNNELCAYDGGDCCECTC-ESLEDDDWACRNNFACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDWXXXX---------------------FACIDPEAACVNDDD------ITVDMFVNCEYPVN-VGDGWCDQGNNNEACGYDGGDCCECTCENERDEDYRCMEFSCIDPSAPCVN---DDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC 519          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 9.540e-48
Identity = 128/339 (37.76%), Postives = 166/339 (48.97%), Query Frame = 1
Query:  244 NTADCGYDEGDCCECMCVDTSDNVCGSGGGFFCSDPSAPTNCTSTASPTLSPTSTTVDTSYPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTCLEGLTHDCGAKGDGFDCQDPDVP---SDCDSANLAECTGYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCCD---------------DGYCL--SCYDPDADCVS---VTPSPAVTSDCPYPTWVGDGICDSGNNIEECSWDGGDCCACTC 1191
            N A C YD GDCCEC C DT +N CG   GF C DP AP  C       +   S TVD    +C+ Y   I DG+CDED N   C +DGGDCC CTC      D   +   F C DP+ P    D  + ++ E   ++    DG C ++LNT +C +DGGDCC CTC     D                   D GC    + C+DP A    D +           + +CE P+  IGNG+C+   N E C +DGGDCC+               D +C+  +C DP A CV    +T    +  +C Y + +G+G CD  NN EEC +DGGDCC+CTC
Sbjct:    4 NNAACAYDGGDCCECTCEDTPNNKCGRWSGFACIDPEAP--C-------VDDDSFTVDM-IDNCD-YPGGIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDDWHCR--NFACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDD-------------------DWGC--MWFACIDPEAACVDDDD------ITVDMFENCEYPVD-IGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVD--MVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC 299          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.300e-45
Identity = 116/329 (35.26%), Postives = 157/329 (47.72%), Query Frame = 1
Query:  259 GYDEGDCCECMCVDTSDN--VCGS-GGGFFCSDPSAPTNCTSTASPTLSPTSTTVDTSYPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTCLEGLTHD--CGAKGDGFDCQDPDVPSDCDSANLAECTGYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCCD-------DGYC-----LSCYDPDADCVSVTPSPA-VTSDCPYPTWVGDGICDSGNNIEECSWDGGDCCACTC 1191
            G+D GDCCEC CV   D+   C S   GF C DP+AP  C      T+            +   +     DG+CD++ N   C +DGGDCC CTC+     D  C A     D   P V  D  + ++ E  GY     +G CD++ N   C +DGGDCC CTC+   +D+                   +GCG+ G+ C+DP AP   D +             +C+     +GNG+C+ + NNE C +DGGDCC+       +  C      +C DP+A CV        +   C YP   G+G CD  NNIEEC++DGGDCC CTC
Sbjct:    5 GFDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAP--CVDDDDITIE----------QALNCFPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQ------------NGCGN-GFACIDPNAPCVNDDD------ITLDIVENCDSVA--VGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTC 300          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 1.510e-38
Identity = 125/334 (37.43%), Postives = 162/334 (48.50%), Query Frame = 1
Query:  259 GYDEGDCCECMCVDTSDNVCGSGGGFFCSDPSAPTNCTSTASPTLSPTSTTVDTSYPSCE---GYLLHIQDGYCDEDLNVAACEWDGGDCCACTCLEGLTHDCGAKGDGFDCQDPD---VPSDCDSANLAECT----GYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCD--TEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCCD---------DGYC--LSCYDPDADCVSVTPSPAVTSDCPYPTWVGDGICDSGNNIEECSWDGGDCCACTC 1191
            GYD GDCCEC CVD S   CG GG F C DPSA   C       +   + T D +  SC    GY+  I DG+C ++ N   C++DGGDCC CTC++   + CG     F C DP    V  D  +A++AE      GY     +G C++  N  +C +D GDCC+CTC   S D                   D  C    + C+DP AP   D  TEG          + DC    +  G+G+CN   NNE+C +DGGDCC+         +  C   +C DP A CV      A   +     ++GDG CD+ NN E C +DGGDCC CTC
Sbjct:   18 GYDGGDCCECTCVDAS-FTCGYGG-FACIDPSAA--C-------VDDDNITEDIA-ESCNDGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCVDAF-YPCGYV--AFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDD-----------------LSDFSCVD--FACVDPNAPCVDDDVTEGM---------FEDC----FNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCMIEYLGDGYCDTYNNNEICDYDGGDCCECTC 304          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 5.220e-37
Identity = 110/326 (33.74%), Postives = 145/326 (44.48%), Query Frame = 1
Query:  109 VQFIVFLAFCSITFVVKDLGAAAQSYPDCDGDTTLLGDALCDFSLNTADCGYDEGDCCECMCVDTSDNVCGSGGGFFCSDPSAPTNCTSTASPTLSPTSTTVDTSYPSCEGYLLH---IQDGYCDEDLNVAACEWDGGDCCACTCLEGLTHDCGAKGDGFDCQDPDVPSDCDSANLAECTGYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEGYNCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCCD---DGYCLS-----CYDPDAD 1053
            V F+  L  C         G  AQ Y +C+G  T +G+  CD  LN   CGYD GDCC C CVD                   PT+  ST+           D  YP C G   H    +DG+CD   N  +C++DGGDCC C+C++G  + CG+   GF C DPD  +  ++A        ++   DG CD   N   C +DGGDCC C+C D                       D  CGS G++CLDP              PA    +PDC+     +G+G+C+   N   C WDGGDCC    +G   S     C+DP+AD
Sbjct:    9 VSFVAALGSCFY-------GGTAQ-YANCNGTVTDIGNGQCDAVLNVPSCGYDGGDCCPCTCVD------------------GPTHSCSTSD---------FDCMYPDCGGSECHEDWAKDGFCDLVNNHPSCDYDGGDCCECSCIDGPDYGCGSI--GFACLDPDCGNTTETAPENTTCEESW-MNDGYCDSSNNYPSCDYDGGDCCECSCVD---------------------GHDYECGSNGFSCLDPACF----------DPALVAEFPDCDAGWLGLGDGFCDSELNTASCGWDGGDCCVCSCNGTACSISDFDCFDPNAD 265          
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.200e-36
Identity = 105/268 (39.18%), Postives = 129/268 (48.13%), Query Frame = 1
Query:  457 QDGYCDEDLNVAACEWDGGDCCACTCLEGLTHDCGAKGDGFDCQDPD---VPSDCDSANLAECTGYTYDYQDGICDDDLNTADCLWDGGDCCRCTCRDYSSDNXXXXXXXXXXXXXXXXXXDSGCGSEG--------YNCLDPTAP--TDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEECDWDGGDCC-----DDGY-C----LSCYDPDADCVSVTPSPAVTSDCPYPTWVGDGICDSGNNIEECSWDGGDCCACTC 1191
            +DG CD   N A CE+DGGDCC+CTC +  T+DCG    GFDC DP    V  D       +  G  +   DG CD D NT +C +DGGDCC CTC+                        D G G +G        + C+DP AP   D D     P     T    C G I ++ +G C+   NNEEC +DGGDCC     DD Y C     +C DP A+C         T +      +GDG CD  NN EEC +DGGDCC+CTC
Sbjct:   38 RDGECDTHNNNAECEYDGGDCCSCTC-QNDTYDCGVS--GFDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQ----------------------VPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKET----CGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVTVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTC 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5869.13359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVP4_9PHAE1.370e-11442.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX76_ECTSI2.920e-9254.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FX77_ECTSI6.110e-8251.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6K0_9PHAE1.060e-7851.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM92_9PHAE8.290e-5139.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F4_ECTSI9.540e-4837.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0S4_ECTSI1.300e-4535.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE1.510e-3837.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Y7_ECTSI5.220e-3733.74Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JTT4_9PHAE2.200e-3639.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5869contigH-elongata_contig5869:5670..8958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.5
Seed ortholog evalue1.7e-81
Seed eggNOG ortholog2880.D7FX76
EggNOG OGs2E9KF@1,2SFXU@2759
Ec32 ortholog descriptionNotch domain
Ec32 orthologEc-10_004580.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons2
Model size2920
Cds size1716
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5869.13359.1prot_H-elongata_contig5869.13359.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5869 6787..8871 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930951.237033-UTR-H-elongata_contig5869:5669..67861622930951.237033-UTR-H-elongata_contig5869:5669..6786Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5869 5670..6786 -
1691679637.8342545-UTR-H-elongata_contig5869:5669..67861691679637.8342545-UTR-H-elongata_contig5869:5669..6786Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5869 5670..6786 -
1622930951.2934854-UTR-H-elongata_contig5869:8871..89581622930951.2934854-UTR-H-elongata_contig5869:8871..8958Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5869 8872..8958 -
1691679637.865893-UTR-H-elongata_contig5869:8871..89581691679637.865893-UTR-H-elongata_contig5869:8871..8958Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5869 8872..8958 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930951.258929-CDS-H-elongata_contig5869:6786..78641622930951.258929-CDS-H-elongata_contig5869:6786..7864Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5869 6787..7864 -
1691679637.8460035-CDS-H-elongata_contig5869:6786..78641691679637.8460035-CDS-H-elongata_contig5869:6786..7864Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5869 6787..7864 -
1622930951.2765336-CDS-H-elongata_contig5869:8233..88711622930951.2765336-CDS-H-elongata_contig5869:8233..8871Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5869 8234..8871 -
1691679637.8578837-CDS-H-elongata_contig5869:8233..88711691679637.8578837-CDS-H-elongata_contig5869:8233..8871Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5869 8234..8871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5869.13359.1

>prot_H-elongata_contig5869.13359.1 ID=prot_H-elongata_contig5869.13359.1|Name=mRNA_H-elongata_contig5869.13359.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=572bp
MAKRTPSVQFIVFLAFCSITFVVKDLGAAAQSYPDCDGDTTLLGDALCDF
SLNTADCGYDEGDCCECMCVDTSDNVCGSGGGFFCSDPSAPTNCTSTASP
TLSPTSTTVDTSYPSCEGYLLHIQDGYCDEDLNVAACEWDGGDCCACTCL
EGLTHDCGAKGDGFDCQDPDVPSDCDSANLAECTGYTYDYQDGICDDDLN
TADCLWDGGDCCRCTCRDYSSDNDYSYYSYWGYYSWWGYYSDSGCGSEGY
NCLDPTAPTDCDTEGPTPSPAANTPYPDCEGPIYYIGNGYCNYNTNNEEC
DWDGGDCCDDGYCLSCYDPDADCVSVTPSPAVTSDCPYPTWVGDGICDSG
NNIEECSWDGGDCCACTCVGSTFDCSSTDCLDPSVDCISTNTDYSSGRGD
DLTSSELYDDLDAPGNMGTPSPVTSGEAQTTSFGDQVLGFSGIQIIGIFT
LTVFLFCCFGGTIVGFLFILHQKWVGVNSKCAVRPSRAQPQLQSHPQPSA
PAVSALKPPLPLGGPEESEGARAKPSSYGETVSSLQPGGSGLPDGVDAGG
PGANETKQHEEPSWRGEVKVA*
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mRNA from alignment at H-elongata_contig5869:5670..8958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5869.13359.1 ID=mRNA_H-elongata_contig5869.13359.1|Name=mRNA_H-elongata_contig5869.13359.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3289bp|location=Sequence derived from alignment at H-elongata_contig5869:5670..8958- (Himanthalia elongata Himel1 dioecious)
AGGCCATCCTCGCGTGACGGATTGGGTGAGACAGAAGCGGATCTCTAGCA TTGTGGAGCCTCCAAAACCCGTGCCGTGCGCGCAAAAATGGCAAAACGCA CGCCCTCCGTCCAGTTCATCGTTTTCCTTGCGTTCTGCTCCATCACCTTC GTGGTAAAAGATCTTGGCGCTGCAGCCCAGAGCTACCCGGACTGCGATGG GGACACTACCTTGCTCGGAGACGCCCTTTGCGATTTTTCCTTAAACACTG CTGACTGCGGCTACGATGAAGGGGACTGCTGCGAGTGTATGTGCGTCGAC ACAAGCGACAATGTTTGCGGTAGCGGCGGTGGGTTCTTCTGCAGCGATCC AAGTGCACCCACAAACTGTACATCCACAGCTAGCCCGACCTTGAGCCCGA CAAGCACGACGGTGGATACTAGTTACCCCAGTTGCGAGGGGTATTTACTA CACATCCAAGATGGGTATTGTGACGAGGACCTGAACGTGGCGGCGTGTGA ATGGGACGGGGGAGACTGCTGCGCCTGCACGTGCCTCGAAGGACTGACCC ATGATTGTGGCGCGAAGGGTGACGGGTTCGACTGCCAAGACCCGGATGTG CCGTCGGACTGCGACAGCGCGAACCTTGCTGAGTGCACTGGATACACGTA CGACTATCAGGACGGGATCTGCGACGACGATCTTAACACTGCCGACTGTT TGTGGGATGGCGGCGATTGTTGCAGGTAGGGGAGGATATACTGTGGTTCG AACATATGCCTCTATAAAGCTACATCACTTCACGACCGACGGAAGCGTGG ATTTCCTTGGGTGGGCTTTTAGAGTTACCTTATACAGGACGCTGGAATAT GATCCCCCATCGGCGCTATTTAGCTCAGCTTGACAGGTGGAGCACGTCCT GAAGGCCCTCAGACATAAAAGGCATTCATCACACGCGGAAGTCCCGTTCT TAAGCGTGTTTTAAGCGTAGGATGAAATCACAGATCAGCTGCCGTACAAC GTAGTTCAGGTGCTGTGTTTAGACCTTCGCTCTACCCCGGCGCGACTCTG CTTGTGTGTTCATTTTTTACGCTTTAATATTTTCTCAAATACAGGTGTAC ATGCCGGGACTACAGCTCCGACAATGATTATTCCTACTATTCATATTGGG GATACTATTCGTGGTGGGGCTACTATTCTGACAGCGGGTGCGGCTCGGAA GGATACAACTGCTTGGACCCGACCGCCCCTACCGACTGCGATACCGAAGG ACCGACGCCGAGCCCGGCGGCGAACACCCCGTACCCGGACTGCGAGGGTC CAATTTACTACATCGGCAATGGCTATTGCAACTACAACACGAACAACGAA GAGTGCGATTGGGATGGTGGAGATTGCTGCGATGACGGCTACTGTCTCTC CTGTTACGACCCAGACGCAGACTGCGTGTCGGTTACGCCAAGCCCAGCTG TGACTTCGGACTGTCCGTATCCTACTTGGGTTGGTGATGGGATTTGCGAC AGCGGCAACAACATCGAAGAGTGTTCCTGGGACGGCGGCGACTGTTGTGC ATGCACCTGTGTGGGCTCCACCTTCGATTGCAGCAGCACCGACTGCCTTG ATCCTTCTGTCGATTGCATCAGTACTAATACTGACTATTCTAGTGGGAGG GGAGACGACTTGACATCCAGTGAACTGTACGACGATCTGGATGCTCCAGG TAACATGGGCACCCCGAGTCCCGTGACCAGCGGAGAAGCGCAAACGACTT CCTTTGGCGACCAAGTGCTCGGGTTCTCGGGCATACAAATCATCGGCATT TTTACTCTGACCGTCTTTTTATTTTGCTGCTTCGGTGGCACCATCGTCGG CTTCCTCTTCATTCTCCATCAAAAGTGGGTAGGGGTCAACAGCAAATGCG CCGTGCGGCCAAGTCGGGCGCAGCCACAACTACAGTCGCACCCACAACCA TCCGCACCTGCAGTGAGCGCCCTCAAGCCGCCGTTGCCTTTAGGGGGACC GGAGGAGTCCGAAGGCGCCAGAGCAAAACCCTCATCGTATGGTGAGACCG TAAGTTCCTTACAGCCTGGGGGCAGCGGGCTGCCCGACGGCGTCGACGCG GGAGGGCCTGGCGCTAATGAGACGAAACAGCACGAGGAACCCTCGTGGAG GGGTGAAGTCAAGGTGGCCTAGTAGGTTACTCGTGATGTGTAGTGGTAAG AAGCTCAGGAAATGTCTGGACGCTGTCATGGGACAGGCCTTATTGGAGTA TACTATGCAAAATATTCAGGGCGTGGTCATGACTATGTGCTGAGTTAGTC CGTTTGTTTTAGGTGTTTCACAGCGACGGGGAGCGGTAACCCAAATTCCG GGCTTCCTGGCCGTTCGATTGAGTGCATGCGCACAGTAGAAATGTGTCAG AGTTGCCTCGGAGTGGACGACGTACAACTACGTACCGCAGGTGCTCAGCG TCTGTTTGTATTCCTTGTGCGCAATTGGTGTTAGTTAGCGAAACGTTTCG AGCTTGAAAAAAAATGGAACAGGCTTCATTCCCCAACACCATCAGCCGTT TTTTTCTTTTTATAAATATCCAAATTCCCCCTATCTCTGGTTGATGTTCG CTGGCATCATCCCCCCTACTATATTAAGTCCTGTTTCCTTCGCGTAAAAG CCTGTTTTACAAAAACATCTTTGGCAGTCTTTACTCGTGTACACCTTGAG CCACACACATGTGTGACAGTTCATTGTTTTTGCTGGTTTGAGGTGTTTGT GGTTTGATTTGTCTCTCGCGTTTTTTGCATTAGATCTTGATTCGATTCTA GAGATGACACGAGGGGGAATAACTGTTGTCTTTGTTATTTATGGAAGCAC ACTAGAAAGTTGTTCCTTGCTATCCACTAGACGTGCTTGTCGTTTCTCGA TTTTTGCATATATAATTGTTTTGCCACTCTACACACTGTGTACCTGGTTC GGGGGAGGGTTTTCATTGAGACTATTTTGAAGCCTTTGCTTGTTGCATAC AATGCTGTAGACTTTGTTCGCCGGTTCGCGGATCGGCCAAAGTCCTTCCG GCCATTCCATCGTCGTGATGGTCGTTTAAGTAACGTTTTATGCTGAGTGC CTAATTCGACCTCAACTATCTTGGCTGCTTAATGTAAAAAGATGCAACAC ATTCGAGCGTGCTGGTGCGAATTTCACCACGTACGTGTCTTGCGCTGCTC TGTCGTATAGCTTGTGTACCGCCTTCAAGGGGCGGCACGCTGGCCTTGGA AGGAAGACTTGTAATCCCAAACTTCACGTCCTAAAACAC
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Coding sequence (CDS) from alignment at H-elongata_contig5869:5670..8958-

>mRNA_H-elongata_contig5869.13359.1 ID=mRNA_H-elongata_contig5869.13359.1|Name=mRNA_H-elongata_contig5869.13359.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3432bp|location=Sequence derived from alignment at H-elongata_contig5869:5670..8958- (Himanthalia elongata Himel1 dioecious)
ATGGCAAAACGCACGCCCTCCGTCCAGTTCATCGTTTTCCTTGCGTTCTG
CTCCATCACCTTCGTGGTAAAAGATCTTGGCGCTGCAGCCCAGAGCTACC
CGGACTGCGATGGGGACACTACCTTGCTCGGAGACGCCCTTTGCGATTTT
TCCTTAAACACTGCTGACTGCGGCTACGATGAAGGGGACTGCTGCGAGTG
TATGTGCGTCGACACAAGCGACAATGTTTGCGGTAGCGGCGGTGGGTTCT
TCTGCAGCGATCCAAGTGCACCCACAAACTGTACATCCACAGCTAGCCCG
ACCTTGAGCCCGACAAGCACGACGGTGGATACTAGTTACCCCAGTTGCGA
GGGGTATTTACTACACATCCAAGATGGGTATTGTGACGAGGACCTGAACG
TGGCGGCGTGTGAATGGGACGGGGGAGACTGCTGCGCCTGCACGTGCCTC
GAAGGACTGACCCATGATTGTGGCGCGAAGGGTGACGGGTTCGACTGCCA
AGACCCGGATGTGCCGTCGGACTGCGACAGCGCGAACCTTGCTGAGTGCA
CTGGATACACGTACGACTATCAGGACGGGATCTGCGACGACGATCTTAAC
ACTGCCGACTGTTTGTGGGATGGCGGCGATTGTTGCAGATGGCAAAACGC
ACGCCCTCCGTCCAGTTCATCGTTTTCCTTGCGTTCTGCTCCATCACCTT
CGTGGTAAAAGATCTTGGCGCTGCAGCCCAGAGCTACCCGGACTGCGATG
GGGACACTACCTTGCTCGGAGACGCCCTTTGCGATTTTTCCTTAAACACT
GCTGACTGCGGCTACGATGAAGGGGACTGCTGCGAGTGTATGTGCGTCGA
CACAAGCGACAATGTTTGCGGTAGCGGCGGTGGGTTCTTCTGCAGCGATC
CAAGTGCACCCACAAACTGTACATCCACAGCTAGCCCGACCTTGAGCCCG
ACAAGCACGACGGTGGATACTAGTTACCCCAGTTGCGAGGGGTATTTACT
ACACATCCAAGATGGGTATTGTGACGAGGACCTGAACGTGGCGGCGTGTG
AATGGGACGGGGGAGACTGCTGCGCCTGCACGTGCCTCGAAGGACTGACC
CATGATTGTGGCGCGAAGGGTGACGGGTTCGACTGCCAAGACCCGGATGT
GCCGTCGGACTGCGACAGCGCGAACCTTGCTGAGTGCACTGGATACACGT
ACGACTATCAGGACGGGATCTGCGACGACGATCTTAACACTGCCGACTGT
TTGTGGGATGGCGGCGATTGTTGCAGGTGTACATGCCGGGACTACAGCTC
CGACAATGATTATTCCTACTATTCATATTGGGGATACTATTCGTGGTGGG
GCTACTATTCTGACAGCGGGTGCGGCTCGGAAGGATACAACTGCTTGGAC
CCGACCGCCCCTACCGACTGCGATACCGAAGGACCGACGCCGAGCCCGGC
GGCGAACACCCCGTACCCGGACTGCGAGGGTCCAATTTACTACATCGGCA
ATGGCTATTGCAACTACAACACGAACAACGAAGAGTGCGATTGGGATGGT
GGAGATTGCTGCGATGACGGCTACTGTCTCTCCTGTTACGACCCAGACGC
AGACTGCGTGTCGGTTACGCCAAGCCCAGCTGTGACTTCGGACTGTCCGT
ATCCTACTTGGGTTGGTGATGGGATTTGCGACAGCGGCAACAACATCGAA
GAGTGTTCCTGGGACGGCGGCGACTGTTGTGCATGCACCTGTGTGGGCTC
CACCTTCGATTGCAGCAGCACCGACTGCCTTGATCCTTCTGTCGATTGCA
TCAGTACTAATACTGACTATTCTAGTGGGAGGGGAGACGACTTGACATCC
AGTGAACTGTACGACGATCTGGATGCTCCAGGTAACATGGGCACCCCGAG
TCCCGTGACCAGCGGAGAAGCGCAAACGACTTCCTTTGGCGACCAAGTGC
TCGGGTTCTCGGGCATACAAATCATCGGCATTTTTACTCTGACCGTCTTT
TTATTTTGCTGCTTCGGTGGCACCATCGTCGGCTTCCTCTTCATTCTCCA
TCAAAAGTGGGTAGGGGTCAACAGCAAATGCGCCGTGCGGCCAAGTCGGG
CGCAGCCACAACTACAGTCGCACCCACAACCATCCGCACCTGCAGTGAGC
GCCCTCAAGCCGCCGTTGCCTTTAGGGGGACCGGAGGAGTCCGAAGGCGC
CAGAGCAAAACCCTCATCGTATGGTGAGACCGTAAGTTCCTTACAGCCTG
GGGGCAGCGGGCTGCCCGACGGCGTCGACGCGGGAGGGCCTGGCGCTAAT
GAGACGAAACAGCACGAGGAACCCTCGTGGAGGGGTGAAGTCAAGGTGGC
CTAGGTGTACATGCCGGGACTACAGCTCCGACAATGATTATTCCTACTAT
TCATATTGGGGATACTATTCGTGGTGGGGCTACTATTCTGACAGCGGGTG
CGGCTCGGAAGGATACAACTGCTTGGACCCGACCGCCCCTACCGACTGCG
ATACCGAAGGACCGACGCCGAGCCCGGCGGCGAACACCCCGTACCCGGAC
TGCGAGGGTCCAATTTACTACATCGGCAATGGCTATTGCAACTACAACAC
GAACAACGAAGAGTGCGATTGGGATGGTGGAGATTGCTGCGATGACGGCT
ACTGTCTCTCCTGTTACGACCCAGACGCAGACTGCGTGTCGGTTACGCCA
AGCCCAGCTGTGACTTCGGACTGTCCGTATCCTACTTGGGTTGGTGATGG
GATTTGCGACAGCGGCAACAACATCGAAGAGTGTTCCTGGGACGGCGGCG
ACTGTTGTGCATGCACCTGTGTGGGCTCCACCTTCGATTGCAGCAGCACC
GACTGCCTTGATCCTTCTGTCGATTGCATCAGTACTAATACTGACTATTC
TAGTGGGAGGGGAGACGACTTGACATCCAGTGAACTGTACGACGATCTGG
ATGCTCCAGGTAACATGGGCACCCCGAGTCCCGTGACCAGCGGAGAAGCG
CAAACGACTTCCTTTGGCGACCAAGTGCTCGGGTTCTCGGGCATACAAAT
CATCGGCATTTTTACTCTGACCGTCTTTTTATTTTGCTGCTTCGGTGGCA
CCATCGTCGGCTTCCTCTTCATTCTCCATCAAAAGTGGGTAGGGGTCAAC
AGCAAATGCGCCGTGCGGCCAAGTCGGGCGCAGCCACAACTACAGTCGCA
CCCACAACCATCCGCACCTGCAGTGAGCGCCCTCAAGCCGCCGTTGCCTT
TAGGGGGACCGGAGGAGTCCGAAGGCGCCAGAGCAAAACCCTCATCGTAT
GGTGAGACCGTAAGTTCCTTACAGCCTGGGGGCAGCGGGCTGCCCGACGG
CGTCGACGCGGGAGGGCCTGGCGCTAATGAGACGAAACAGCACGAGGAAC
CCTCGTGGAGGGGTGAAGTCAAGGTGGCCTAG
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