prot_H-elongata_contig58680.13358.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58680.13358.1
Unique Nameprot_H-elongata_contig58680.13358.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
BLAST of mRNA_H-elongata_contig58680.13358.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 2.720e-26
Identity = 55/127 (43.31%), Postives = 85/127 (66.93%), Query Frame = 0
Query:    3 NMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 128
            NM   R C  +I  + L  +Q+  +IF+I T T  VRL++GV+++ +     +GRV+P+LEFW+M VG++G  + +  LSGLL ET+R ++ + GE +M+ ++A RG VEDYRVS +L   FALL +
Sbjct:  182 NMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALLDE 308          
BLAST of mRNA_H-elongata_contig58680.13358.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.920e-25
Identity = 51/120 (42.50%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   10 CLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 128
            C  +I +  L  VQS Q+I++I+T   +VR + G+ H+     E +GR++P+L+ WEM VG+ G +L+++ L+G+L ET+R +  ++G  +MK   A RG  EDYRVS +L TDFALL++
Sbjct:  232 CTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLRQ 351          
BLAST of mRNA_H-elongata_contig58680.13358.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 4.130e-25
Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    4 MVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 128
            M  P  C  +I  + L  +QS  +IF+I T T  VRL++GV+++ N     +GRV+P+LEFW+M VG++G  + +  LSGLL ET+R ++ + G+ +M+  +A RG +EDYRVSD+L   F LL +
Sbjct:  282 MAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDE 407          
BLAST of mRNA_H-elongata_contig58680.13358.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 3.280e-24
Identity = 52/128 (40.62%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    2 ANMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRN-NRTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 128
             +M     C  +I   GL GVQS  +I++IVT   +VRL+ G+ H++ +  + +GRV+P+L+ W+M VG+ G +L+++ L+G+L ET+R ++ + G  +M   +A RG  EDYRVS  L  DFALL +
Sbjct:  568 TDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLHQ 695          
BLAST of mRNA_H-elongata_contig58680.13358.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 6.930e-23
Identity = 51/127 (40.16%), Postives = 81/127 (63.78%), Query Frame = 0
Query:    3 NMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNN-RTETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIMKDANAIRGRVEDYRVSDSLSTDFALLQK 128
            NM     C  +I  + L  +Q+  +IF+I T T  VRL++GV++++N     +GRV+P+LEFW++ VG++G  +    LSGL  ET+  ++ + G+ +M+  +A RG VEDYRVS +L   FALL +
Sbjct:  167 NMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALLDE 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58680.13358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMW2_ECTSI2.720e-2643.31Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JP35_9PHAE1.920e-2542.50Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS96_9PHAE4.130e-2542.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNZ2_9PHAE3.280e-2440.63VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JP37_9PHAE6.930e-2340.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58680contigH-elongata_contig58680:2150..2545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58680.13358.1mRNA_H-elongata_contig58680.13358.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58680 1786..3500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58680.13358.1 ID=prot_H-elongata_contig58680.13358.1|Name=mRNA_H-elongata_contig58680.13358.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
MANMVVPRRCLNFIHNHGLFGVQSRQSIFRIVTSTAIVRLSSGVSHRNNR
TETNGRVIPELEFWEMSVGVNGPTLQHDNLSGLLTETSRVMHIKYGEPIM
KDANAIRGRVEDYRVSDSLSTDFALLQKNAD*
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