prot_H-elongata_contig58680.13357.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58680.13357.1
Unique Nameprot_H-elongata_contig58680.13357.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length155
Homology
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.800e-25
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 0
Query:   65 ITDCPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAKCP 154
            + D  +   +  DPH   L GQ+VNW G DGGWYSL++D  ADLHINVR TA    +FP +QL+T +AI+S G+S+VIEVK P+TTDT  CP
Sbjct:    8 VDDDDNADHIWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCP 99          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.490e-25
Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 0
Query:   68 CPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAKCP 154
            CP G +VC DPH   L+GQ+++W GVDGGWYSL++D   D++INVR TA    +FP +QL+T +A+LS GHS+VIEV+ P+T  T  CP
Sbjct:  105 CPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCP 193          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: D7G4E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E8_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.900e-23
Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   71 GVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTD 149
            G  +C DPH   L+GQ ++W GVDGGWY+ ++D   DLH+NVR TA    +FP++QLVTG+++++G HS+++EV  P+ TD
Sbjct:    4 GTDICDDPHMKGLRGQHIDWFGVDGGWYAFIKDDDIDLHVNVRLTAPLPEEFPERQLVTGLSVIAGEHSLILEVTNPYDTD 84          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 5.290e-22
Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 0
Query:   65 ITDCPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAKCP 154
            + D  +   +  DPH   L+GQ++NW GVDGGWYSL++D  ADL INVR TA    +FP +QL+T +AI+S G+S+VIEV+ P+T  T  CP
Sbjct:    3 VDDDDNADDMWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCP 94          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.960e-21
Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 0
Query:   68 CPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTD 149
            CP G  +C DPH   L GQ ++W GVDG WYS ++D   DL +NVR TA    DFP +QLVTG++++S GHS+V+EV  P++TD
Sbjct:  395 CPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTD 478          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 6.470e-21
Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = 0
Query:   65 ITDCPDGVSVCKDPHQLQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDTAK-CP 154
            +T C D  +V      L GQ ++W G+DGGWYSL++D   DL++NVR TA    +FP +QLVTG+++++GGHS+VIEV +P+ TDTA  CP
Sbjct:   51 LTGCTDTYAV------LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCP 135          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5KHZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ2_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.230e-18
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:   68 CPDGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAI----------------------LSGGHSIVIEVK 143
            CPDG ++C DPH   L GQ ++W GVDGGWYS +RD   DL++NVR TA    +FP +QLVTG+++                      ++ GHS+VIEV+
Sbjct:   34 CPDGTNLCLDPHMKGLFGQNIDWFGVDGGWYSFVRDPDIDLNVNVRLTAPLPEEFPDRQLVTGLSVVXXXXXXXXXXXXXXXXXXXXXMARGHSLVIEVR 133          
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.340e-11
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   70 DGVSVCKDPHQ--LQGQQVNWPGVDGGWYSLLRDKIADLHINVRTTASHSIDFPKQQLVTGVAILSG-GHSIVIEVKEPHTTDTAKC 153
            D   V  D H   L GQ+++W G D GWY LL +  ++  +N R TA    +FP +QLV+GV+I S  G S+V+EVK P TT+T  C
Sbjct:    3 DDPQVSGDSHMVGLLGQEIDWYGEDSGWYCLLVN--SEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGC 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58680.13357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JP37_9PHAE1.800e-2555.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS96_9PHAE2.490e-2555.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E8_ECTSI1.900e-2349.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMW2_ECTSI5.290e-2251.09Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JNZ2_9PHAE1.960e-2152.38VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JP35_9PHAE6.470e-2150.55Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHZ2_9PHAE2.230e-1843.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD0_9PHAE1.340e-1144.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58680contigH-elongata_contig58680:524..1906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58680.13357.1mRNA_H-elongata_contig58680.13357.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58680 122..3500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58680.13357.1 ID=prot_H-elongata_contig58680.13357.1|Name=mRNA_H-elongata_contig58680.13357.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
MLDPDEGTCCGMCSQVALNDEIVRLLVSDASNSTGGMLNPGIPEQNNIDI
IIIVRMLIIYMDLTITDCPDGVSVCKDPHQLQGQQVNWPGVDGGWYSLLR
DKIADLHINVRTTASHSIDFPKQQLVTGVAILSGGHSIVIEVKEPHTTDT
AKCP*
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