prot_H-elongata_contig58621.13354.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58621.13354.1
Unique Nameprot_H-elongata_contig58621.13354.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
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BLAST of mRNA_H-elongata_contig58621.13354.1 vs. uniprot
Match: D7G0G0_ECTSI (ILEI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G0_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 4.860e-5
Identity = 48/148 (32.43%), Postives = 70/148 (47.30%), Query Frame = 0 
Query:    1 MARVEVGSLSTPMLEIKMSSLLKMCRDGPKAQLTANSLGFFDHFLEKELPAKPRGP-VDTYE-----NLGVPFEWEIAPDGLSGGPSRTDEXXXXXXXSMAQAETDR-GFPGWPS--------VLMVNARDAEQVILRAAGHKDSPEV 133
            M +++  SL  PML+ K++SLL++CRD PK Q  A  L  F+   E  +   P G  V   E     ++  P  W+          ++TD        +++ A+T   G P  P         V +VN RDAE++ LRAA   DS EV
Sbjct: 4188 MEKMDAASLPPPMLDSKLASLLRICRDCPKEQPPALGLENFE--AEPAIQPLPDGSSVRVGEPSWPSSIHSPIVWDSF---FEAQTAKTD------LSAVSTADTPAVGMPMIPRCLRRYRLRVFVVNPRDAEEISLRAAPRTDSDEV 4324
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58621.13354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0G0_ECTSI4.860e-532.43ILEI domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58621contigH-elongata_contig58621:438..1296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58621.13354.1mRNA_H-elongata_contig58621.13354.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58621 438..1296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58621.13354.1 ID=prot_H-elongata_contig58621.13354.1|Name=mRNA_H-elongata_contig58621.13354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MARVEVGSLSTPMLEIKMSSLLKMCRDGPKAQLTANSLGFFDHFLEKELP
AKPRGPVDTYENLGVPFEWEIAPDGLSGGPSRTDEPSRTDGPSMAQAETD
RGFPGWPSVLMVNARDAEQVILRAAGHKDSPEV
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