prot_H-elongata_contig58605.13351.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58605.13351.1
Unique Nameprot_H-elongata_contig58605.13351.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: D7FQH9_ECTSI (Cation efflux family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH9_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 5.000e-7
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 APRERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVS 45
            A  +RKLK+A A + + F+VE+IGG+ +GSLAI+SDAAHLL+DVS
Sbjct:   77 AANQRKLKQATAFVLVFFVVEVIGGVWSGSLAIISDAAHLLADVS 121          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A836CJ41_9STRA (Cation efflux protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ41_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.260e-6
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    6 KLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVS 45
            KLKRA   + + F+VE++GGI+AGSLAI++DAAHLL+DVS
Sbjct:    6 KLKRATVFVLIFFVVELVGGIMAGSLAILTDAAHLLTDVS 45          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A2R6WZM4_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WZM4_MARPO)

HSP 1 Score: 52.0 bits (123), Expect = 3.140e-6
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 APRERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVSVSSTHLLLLLTSSY 59
            A   ++L+RA+   F   L+E++GG LAGSLAI+SDAAHLLSDV+  +  LL L  S +
Sbjct:   66 ASASKRLQRALVVCFFFMLLEIVGGSLAGSLAILSDAAHLLSDVAGFAISLLALRASEW 124          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A2R6WZP1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WZP1_MARPO)

HSP 1 Score: 52.0 bits (123), Expect = 3.260e-6
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 APRERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVSVSSTHLLLLLTSSY 59
            A   ++L+RA+   F   L+E++GG LAGSLAI+SDAAHLLSDV+  +  LL L  S +
Sbjct:   66 ASASKRLQRALVVCFFFMLLEIVGGSLAGSLAILSDAAHLLSDVAGFAISLLALRASEW 124          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A495ZCJ2_9BACT (Cation transporter n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A495ZCJ2_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 1.510e-5
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    4 ERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDV 44
            ++K K A+   FLVFL E+IGGI +GSLA++SDAAH++SDV
Sbjct:   23 QKKFKIAVVVTFLVFLGELIGGIWSGSLALLSDAAHVMSDV 63          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A2R5GLR2_9STRA (Zinc transporter 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLR2_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.570e-5
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    5 RKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVS 45
            RKL RA    F   LVE++GG +AGSLAIM+DAAHLLSDV+
Sbjct:   86 RKLVRATLICFTFMLVEIVGGYIAGSLAIMTDAAHLLSDVA 126          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A7S0BSU3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSU3_9RHOD)

HSP 1 Score: 49.3 bits (116), Expect = 2.900e-5
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    4 ERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVS 45
            E+KL +A    F+  +VE++GG L+GSLA+MSDAAHLLSD++
Sbjct:   29 EKKLVKASVLCFIFMVVELVGGYLSGSLAVMSDAAHLLSDLA 70          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A7S0ZNA2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZNA2_NOCSC)

HSP 1 Score: 49.3 bits (116), Expect = 2.920e-5
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    4 ERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVS 45
            ++K+K AI        VE+IGG++AGSLAIM+DAAH+LSDVS
Sbjct:  117 KKKMKIAIGFALFFMFVELIGGLIAGSLAIMTDAAHMLSDVS 158          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A4P9XJT8_9FUNG (Cation efflux protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XJT8_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 3.770e-5
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    4 ERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVS 45
            +R+L R +    + FLVE++GG+LAGSLA+MSDA HLLSD++
Sbjct:    1 KRRLSRVMILCSVFFLVELVGGMLAGSLALMSDAFHLLSDIA 42          
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Match: A0A059LQV4_9CHLO (Cation efflux family protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LQV4_9CHLO)

HSP 1 Score: 48.9 bits (115), Expect = 3.990e-5
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 ERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVS 45
            +RKL  A+   F    VE++GGI AGSLAI++DAAHLLSDVS
Sbjct:   19 QRKLLAALVVAFAFMAVEVVGGIYAGSLAILTDAAHLLSDVS 60          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58605.13351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FQH9_ECTSI5.000e-762.22Cation efflux family protein n=1 Tax=Ectocarpus si... [more]
A0A836CJ41_9STRA1.260e-665.00Cation efflux protein n=1 Tax=Tribonema minus TaxI... [more]
A0A2R6WZM4_MARPO3.140e-650.85Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A2R6WZP1_MARPO3.260e-650.85Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A495ZCJ2_9BACT1.510e-560.98Cation transporter n=1 Tax=Candidatus Poribacteria... [more]
A0A2R5GLR2_9STRA1.570e-565.85Zinc transporter 2 n=1 Tax=Hondaea fermentalgiana ... [more]
A0A7S0BSU3_9RHOD2.900e-557.14Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZNA2_NOCSC2.920e-559.52Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A4P9XJT8_9FUNG3.770e-557.14Cation efflux protein (Fragment) n=1 Tax=Thamnocep... [more]
A0A059LQV4_9CHLO3.990e-561.90Cation efflux family protein n=1 Tax=Helicosporidi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027469Cation efflux transmembrane domain superfamilyGENE3D1.20.1510.10coord: 4..58
e-value: 1.4E-6
score: 30.0
IPR027469Cation efflux transmembrane domain superfamilySUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 4..57
IPR002524Cation efflux proteinPFAMPF01545Cation_effluxcoord: 8..54
e-value: 3.7E-7
score: 30.1
NoneNo IPR availablePANTHERPTHR11562CATION EFFLUX PROTEIN/ ZINC TRANSPORTERcoord: 4..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..59
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58605contigH-elongata_contig58605:319..498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58605.13351.1mRNA_H-elongata_contig58605.13351.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58605 319..498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58605.13351.1 ID=prot_H-elongata_contig58605.13351.1|Name=mRNA_H-elongata_contig58605.13351.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
APRERKLKRAIASLFLVFLVEMIGGILAGSLAIMSDAAHLLSDVSVSSTH
LLLLLTSSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027469Cation_efflux_TMD_sf
IPR002524Cation_efflux