mRNA_H-elongata_contig58587.13347.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig58587.13347.1
Unique NamemRNA_H-elongata_contig58587.13347.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS)

HSP 1 Score: 211 bits (538), Expect = 4.600e-63
Identity = 111/223 (49.78%), Postives = 158/223 (70.85%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTIE-ITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGCKEET 666
            KVMFL AVARPR   +   +FSGKIGI+PFT +  A+R+S+NR AGTM TK +  +TK+  +  L+EKVIP ++S+  + S G     + +++QQDNARPH+  ND +  EA + +G+DIRL NQPANSPD N+LDLGFFN+IQ LQ++  PR++D+LV AV +++++ P   L+ V+LSL A + ++M   G N+YKLPH  K +L + GVLP+QL C  + 
Sbjct:  214 KVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQSSVG-----ETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLECGRDV 431          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 202 bits (515), Expect = 9.690e-60
Identity = 111/221 (50.23%), Postives = 150/221 (67.87%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTI-EITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGCKE 660
            KVMFL AVARPR + S N  FSGKIGIYPFT+   A+RSS+NR AGT+ TK I  +TKE  +  L+EKV+PD++++ PR   G       +++QQDNA+PH+  ND +  EA S DG+DIRL  QP+NSPD N+LDLGFF +IQ LQ +    ++DELV AV  A+ +     LN V+L+L   + +I+   G N+Y++PH  K RLE+ G LP ++GC E
Sbjct:  208 KVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGP------IFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLPLRIGCDE 422          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663)

HSP 1 Score: 202 bits (513), Expect = 1.040e-59
Identity = 109/219 (49.77%), Postives = 148/219 (67.58%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTI-EITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGC 654
            KVMFL AVARPR + S N  FSGKIGI+PFT    A+RSS+NR AGT++TK I  +TKE  +  L+EKV+P ++S+ PR   G       +++QQDNA+PH+  ND +  +  S DG+DIRL  QP NSPD N+LDLGFF +IQ LQ + +  S+DELV+AV  ++ R P   LN V+L+L   +++IM   G N+Y+ PH  KG+LE+ G LP  + C
Sbjct:  180 KVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGP------IFIQQDNAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIEC 392          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 199 bits (505), Expect = 4.880e-59
Identity = 109/222 (49.10%), Postives = 148/222 (66.67%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTIE-ITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGCKEE 663
            K MFL AVARPR        FSGKIGI+PFT    A+R+S+NR AGTMVTK  E ITKE  K  L+EKVIP + ++ P+         + + +QQDNA+PH+  N+ +  +A S DG+DIRL+ QP NSPD N+LDLGFF SIQ LQ+   P +++ELV AV ++++  P   LNRV+L+    +++IM   G+NDYK+PH  K RLE+ G LP Q+ C+ +
Sbjct:  140 KAMFLAAVARPRNG------FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQ-------GMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESD 348          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: UPI001CB94040 (uncharacterized protein LOC122597462 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB94040)

HSP 1 Score: 196 bits (499), Expect = 1.100e-58
Identity = 106/219 (48.40%), Postives = 147/219 (67.12%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTI-EITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGC 654
            KVMFL AVARPR + S N  FSGKIGI+PFT    A+R S+NR AGT++TK I  +TKE  +  L+EKV+P ++S+ PR   G       +++QQ+NA+PH+  ND +  +  S DG+DIRL  QP NSPD N+LDLGFF +IQ L+ + +  S+DELV+AV  ++ R P   LN V+L+L   +++IM   G N+Y+ PH  KG+LE+ G LP  + C
Sbjct:   87 KVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRLSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGP------IFIQQENAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLKKQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIEC 299          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: A0A8I6WKB7_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WKB7_HORVV)

HSP 1 Score: 194 bits (492), Expect = 3.510e-58
Identity = 101/223 (45.29%), Postives = 148/223 (66.37%), Query Frame = 1
Query:    4 VMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTIEITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGCKEETWA 672
            VMFL AVARP+ +   N  FSGKIGI+PF +++ AQR S NR  GTM TK+I++ ++  ++ ++E ++P ++S  P   AG     + ++++QDNA+PH++ NDP+   A+ + G DIRL+ QPANSPD N LDLGFFNS+Q L +   PR++ +L+  V E +       LNRV+LSL A + +I+   G N YK+PH  K RLE  G+LP +L C +E +A
Sbjct:   43 VMFLTAVARPKWDSEGNVTFSGKIGIWPFVKEIPAQRKSDNRPRGTMETKSIKVNRQVMREFMIENLLPAIQSSWPDNDAG-----QTIFIKQDNAKPHILPNDPEFLVAVESTGLDIRLIQQPANSPDLNGLDLGFFNSLQSLTDCLSPRTLQDLIKGVLEEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHVNKERLESLGLLPQRLTCPQEVYA 260          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: A0A1R3KIH7_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KIH7_9ROSI)

HSP 1 Score: 198 bits (504), Expect = 4.520e-58
Identity = 102/218 (46.79%), Postives = 149/218 (68.35%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTIEITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGC 654
            KVMFL AVARPR + S N  FSGKIGI+PF  +  A+R S+NR AGTM TK + +TK+  +  ++EK++P +KS+ P        + + V++QQDNA+PH+   D +  +A S+DG+DI++  QP NSPD N+LDLGFF +IQ LQ++  PR++DEL+ AV +++N  P+  LN V+L+L   + ++M  GG N+YK+PH  K +L+  G LP  L C
Sbjct:  214 KVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWPD-------KMETVYIQQDNAKPHINPKDVEFLKAASSDGFDIQISCQPPNSPDLNVLDLGFFRAIQSLQHQEAPRTIDELINAVEKSFNEFPENSLNNVFLTLQNCMIEVMKVGGGNNYKVPHMGKDKLQNQGNLPTTLEC 424          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: UPI000CD7E6F3 (uncharacterized protein LOC111896598 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD7E6F3)

HSP 1 Score: 194 bits (494), Expect = 6.780e-58
Identity = 109/219 (49.77%), Postives = 145/219 (66.21%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTI-EITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGC 654
            KVMFL AVARPR +   N  FSGKIGIY FT    A+RSS+NR AGT+ TK I  + KE  +  L+EKV+PD+K++ P+   G       +++QQDNA+PH+  ND +  EA S DG+DIRL  QP NSPD N+LDLGFF +IQ LQ + + R +DELV AV  ++ R P   LN V+L+L   +++I+   G N+Y +PH  K RLE+ G LP Q+ C
Sbjct:   93 KVMFLAAVARPRFDSLGNEVFSGKIGIYLFTTLEPAKRSSKNRIAGTLETKPILSVNKEVTRSWLIEKVLPDIKTKWPQGHIGP------IFIQQDNAKPHIDVNDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFQAIQSLQEQEVLRIIDELVDAVQTSFERMPSQQLNNVFLTLQTCMKEIIKVQGGNNYHVPHIGKCRLEREGNLPLQIEC 305          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: UPI000E6FC7BC (uncharacterized protein LOC113359119 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC7BC)

HSP 1 Score: 190 bits (483), Expect = 5.440e-57
Identity = 107/219 (48.86%), Postives = 142/219 (64.84%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTI-EITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGC 654
            KVMFL  VARPR + + N +FSGKIGI+PFT Q  AQR+S+NR AGTM TK I  +TK+  +  L+ KV+P ++S+ PR S       + +++QQDNARPH+  ND +  E  S DG+DIRL  QP NSPD N+LDLG+F +IQ LQ R  P ++DELV AV E++       LN V+L+    + + M   G N+YK+ H  K RL + G LP QL C
Sbjct:   29 KVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKAILSVTKDVIRSCLINKVLPAIRSKWPRSS-----NMEPIFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPPNSPDFNVLDLGYFRAIQSLQYRYAPSTIDELVQAVQESFENLSSKNLNYVFLTFQGCMIESMKQLGGNNYKVSHMAKDRLARNGNLPIQLEC 242          
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3)

HSP 1 Score: 195 bits (496), Expect = 6.680e-57
Identity = 107/221 (48.42%), Postives = 145/221 (65.61%), Query Frame = 1
Query:    1 KVMFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKTI-EITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLVNNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPRSVDELVTAV*EAWNRDPQAVLNRVWLSL*AYLEQIMLAGGENDYKLPHGCKGRLEKAGVLPWQLGCKE 660
            K+MFL AVARPR + S N  FSGKIGIYPFT    A+RSS+NR AGTM TK I  + KE  +  L+EKV+PD++++ PR   G       +++QQDNA+PH+  +D +  EA S DG+DIRL  QP NSPD N+LDLGFF +IQ LQ +    + DELV AV  ++ R     LN V+L+L   +++I+   G N+Y +PH  K RL++ G LP Q+ C +
Sbjct:  209 KIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGP------IFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQGNLPLQIECDQ 423          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58587.13347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A834FW95_RHOSS4.600e-6349.78Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
UPI000CD873B39.690e-6050.23uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
UPI001CB9A6631.040e-5949.77uncharacterized protein LOC122597563 n=3 Tax=Erige... [more]
UPI0007F012D14.880e-5949.10uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
UPI001CB940401.100e-5848.40uncharacterized protein LOC122597462 n=1 Tax=Erige... [more]
A0A8I6WKB7_HORVV3.510e-5845.29Uncharacterized protein n=1 Tax=Hordeum vulgare su... [more]
A0A1R3KIH7_9ROSI4.520e-5846.79Transposase, Tc1-like protein n=1 Tax=Corchorus ol... [more]
UPI000CD7E6F36.780e-5849.77uncharacterized protein LOC111896598 n=1 Tax=Lactu... [more]
UPI000E6FC7BC5.440e-5748.86uncharacterized protein LOC113359119 n=1 Tax=Papav... [more]
UPI000CD9DCB36.680e-5748.42uncharacterized protein LOC111916103 n=1 Tax=Lactu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58587contigH-elongata_contig58587:2792..3463 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score152.9
Seed ortholog evalue1.3e-34
Seed eggNOG ortholog161934.XP_010668209.1
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size672
Cds size480
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58587.13347.1prot_H-elongata_contig58587.13347.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig58587 2798..3277 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930949.696011-UTR-H-elongata_contig58587:2791..27971622930949.696011-UTR-H-elongata_contig58587:2791..2797Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58587 2792..2797 +
1691679637.2003107-UTR-H-elongata_contig58587:2791..27971691679637.2003107-UTR-H-elongata_contig58587:2791..2797Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58587 2792..2797 +
1622930949.724451-UTR-H-elongata_contig58587:3277..34631622930949.724451-UTR-H-elongata_contig58587:3277..3463Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58587 3278..3463 +
1691679637.2212365-UTR-H-elongata_contig58587:3277..34631691679637.2212365-UTR-H-elongata_contig58587:3277..3463Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58587 3278..3463 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930949.7132497-CDS-H-elongata_contig58587:2797..32771622930949.7132497-CDS-H-elongata_contig58587:2797..3277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58587 2798..3277 +
1691679637.2129014-CDS-H-elongata_contig58587:2797..32771691679637.2129014-CDS-H-elongata_contig58587:2797..3277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58587 2798..3277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig58587.13347.1

>prot_H-elongata_contig58587.13347.1 ID=prot_H-elongata_contig58587.13347.1|Name=mRNA_H-elongata_contig58587.13347.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
MFLGAVARPRRNHSINSDFSGKIGIYPFTQQVRAQRSSRNRAAGTMVTKT
IEITKESYKKMLLEKVIPDVKSQSPRPSAGASPEAKIVWVQQDNARPHLV
NNDPKIREAMSADGWDIRLVNQPANSPDTNILDLGFFNSIQPLQNRTIPR
SVDELVTAV*
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mRNA from alignment at H-elongata_contig58587:2792..3463+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig58587.13347.1 ID=mRNA_H-elongata_contig58587.13347.1|Name=mRNA_H-elongata_contig58587.13347.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=672bp|location=Sequence derived from alignment at H-elongata_contig58587:2792..3463+ (Himanthalia elongata Himel1 dioecious)
AAGGTGATGTTTCTCGGCGCTGTGGCACGGCCAAGGCGCAATCATTCGAT CAACTCGGATTTCAGCGGGAAGATTGGGATCTACCCCTTTACGCAGCAAG TGAGAGCCCAGCGAAGCAGCCGGAACAGGGCTGCAGGCACAATGGTAACA AAAACGATTGAGATCACCAAGGAGAGCTACAAGAAGATGCTCCTAGAAAA GGTTATTCCCGACGTCAAGAGCCAGTCTCCTCGCCCTTCGGCCGGTGCCA GTCCCGAGGCTAAGATAGTTTGGGTACAGCAGGACAACGCGCGTCCCCAT CTCGTCAACAACGACCCAAAGATTAGGGAGGCCATGTCTGCAGACGGGTG GGACATCCGACTGGTCAACCAGCCAGCCAACAGCCCGGACACAAACATTT TGGATTTGGGTTTCTTCAACTCAATCCAGCCCCTGCAGAACCGCACGATC CCTAGGTCCGTGGATGAGTTGGTCACCGCAGTGTAGGAGGCTTGGAACCG GGACCCTCAGGCCGTGCTCAACCGGGTGTGGCTCAGCCTGTAGGCCTACC TGGAGCAGATAATGCTTGCCGGAGGGGAGAATGACTACAAGCTGCCCCAT GGTTGCAAGGGCAGGCTCGAGAAAGCCGGTGTTCTGCCGTGGCAGTTGGG GTGCAAGGAGGAGACATGGGCG
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Coding sequence (CDS) from alignment at H-elongata_contig58587:2792..3463+

>mRNA_H-elongata_contig58587.13347.1 ID=mRNA_H-elongata_contig58587.13347.1|Name=mRNA_H-elongata_contig58587.13347.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=960bp|location=Sequence derived from alignment at H-elongata_contig58587:2792..3463+ (Himanthalia elongata Himel1 dioecious)
ATGTTTCTCGGCGCTGTGGCACGGCCAAGGCGCAATCATTCGATCAACTC
GGATTTCAGCGGGAAGATTGGGATCTACCCCTTTACGCAGCAAGTGAGAG
CCCAGCGAAGCAGCCGGAACAGGGCTGCAGGCACAATGGTAACAAAAACG
ATTGAGATCACCAAGGAGAGCTACAAGAAGATGCTCCTAGAAAAGGTTAT
TCCCGACGTCAAGAGCCAGTCTCCTCGCCCTTCGGCCGGTGCCAGTCCCG
AGGCTAAGATAGTTTGGGTACAGCAGGACAACGCGCGTCCCCATCTCGTC
AACAACGACCCAAAGATTAGGGAGGCCATGTCTGCAGACGGGTGGGACAT
CCGACTGGTCAACCAGCCAGCCAACAGCCCGGACACAAACATTTTGGATT
TGGGTTTCTTCAACTCAATCCAGCCCCTGCAGAACCGCACGATCCCTAGG
TCCGTGGATGAGTTGGTCACCGCAGTGTAGATGTTTCTCGGCGCTGTGGC
ACGGCCAAGGCGCAATCATTCGATCAACTCGGATTTCAGCGGGAAGATTG
GGATCTACCCCTTTACGCAGCAAGTGAGAGCCCAGCGAAGCAGCCGGAAC
AGGGCTGCAGGCACAATGGTAACAAAAACGATTGAGATCACCAAGGAGAG
CTACAAGAAGATGCTCCTAGAAAAGGTTATTCCCGACGTCAAGAGCCAGT
CTCCTCGCCCTTCGGCCGGTGCCAGTCCCGAGGCTAAGATAGTTTGGGTA
CAGCAGGACAACGCGCGTCCCCATCTCGTCAACAACGACCCAAAGATTAG
GGAGGCCATGTCTGCAGACGGGTGGGACATCCGACTGGTCAACCAGCCAG
CCAACAGCCCGGACACAAACATTTTGGATTTGGGTTTCTTCAACTCAATC
CAGCCCCTGCAGAACCGCACGATCCCTAGGTCCGTGGATGAGTTGGTCAC
CGCAGTGTAG
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