prot_H-elongata_contig58578.13346.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58578.13346.1
Unique Nameprot_H-elongata_contig58578.13346.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length216
Homology
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: D7FXW8_ECTSI (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXW8_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 1.100e-100
Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 0
Query:   16 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLR--REEGEEG---ATGADDFQRLDPPQMPIRPPHES 216
            QGDITS  TA+AIIDHFRGGLAELVVCDGAPDVTGLHD+DEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRD  LLYSQL LLFERVTIAKPRSSRSSSIE+FVVCR +  P GFE SMLTP+LDH++S      NERLGPA   NL+VPFVACGDLSGFDADKSYPL   REEG++G    T    +QR+ P QMPIRPPHE+
Sbjct:  198 QGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAHS----ATNERLGPA---NLIVPFVACGDLSGFDADKSYPLEEPREEGKDGDSQLTSQRGYQRIPPAQMPIRPPHET 396          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A507E4B4_9FUNG (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E4B4_9FUNG)

HSP 1 Score: 246 bits (629), Expect = 8.560e-79
Identity = 125/216 (57.87%), Postives = 157/216 (72.69%), Query Frame = 0
Query:    1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 216
            V L  + P       QGDIT  STA+ II HF G LA+LVVCDGAPDVTGLHDMDEY+QAQLLLAALNIT +VL PGGTF+AKIFRG+D+ LLY+Q+ + F  VT +KPRSSR+SSIE+F+VC+ +  P  + P+ML P+LD+SY    G  NE  G   +  ++VPF+ACGDLSGFD+D++Y L   EGEE       +  LDP QMPIRPP+++
Sbjct:   77 VDLQAMAPLPGVIQLQGDITKSSTAEQIISHFEGRLADLVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTNVLRPGGTFIAKIFRGKDISLLYAQMKIFFPTVTCSKPRSSRNSSIEAFIVCQNYTPPPNYTPTMLNPLLDYSY----GEGNELTG---INRVIVPFIACGDLSGFDSDQTYALGNAEGEE-------YNVLDPVQMPIRPPYQT 278          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A3Q2T1E0_FUNHE (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=6 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2T1E0_FUNHE)

HSP 1 Score: 243 bits (620), Expect = 5.170e-77
Identity = 126/200 (63.00%), Postives = 149/200 (74.50%), Query Frame = 0
Query:   16 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 215
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+DV LLYSQL + F  VT AKPRSSR+SSIE+FVVC+ +  P G+ P+M  P+LDHSY       N+  GP  V+   VPF+ACGDLS FD+D++YPL+ E G+E       +Q + P Q PIRPP+E
Sbjct:   99 QGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLRIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSYDV---DFNQLEGPNRVI---VPFLACGDLSAFDSDRTYPLQLETGKE-------YQYVPPTQPPIRPPYE 285          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A0L0HEN0_SPIPD (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HEN0_SPIPD)

HSP 1 Score: 241 bits (615), Expect = 1.130e-76
Identity = 124/216 (57.41%), Postives = 158/216 (73.15%), Query Frame = 0
Query:    1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 216
            V L  + P       QGDIT +STA+ I+ +F G LA+LVVCDGAPDVTGLHDMDEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+D+ LLY+Q+ + F  VT +KPRSSR+SSIE+F+VC+ +  P G+ P+ML P+LD +Y       NE  G   V  ++VPFVACGDLSGFD+D++YPL + +G E +T       L+P Q PIRPP+++
Sbjct:   77 VDLQAMAPLPGVIQLQGDITKRSTAEQIVSYFEGQLADLVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGKDISLLYAQMKVFFPVVTCSKPRSSRNSSIEAFIVCQDYTPPEGYIPTMLNPLLDLTYDEK----NELTG---VNRVIVPFVACGDLSGFDSDQTYPLPKGDGAEYST-------LEPVQAPIRPPYQT 278          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: UPI001CFD5BE7 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFD5BE7)

HSP 1 Score: 243 bits (620), Expect = 1.360e-76
Identity = 125/200 (62.50%), Postives = 147/200 (73.50%), Query Frame = 0
Query:   16 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 215
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNI  HVL PGG+FVAKIFRGRDV LLYSQL + F  V  AKPRSSR+SSIE+F VCRGF  P G+ PSML P+LDHSY    G  N+  GP  V+   VPF+ACGDLS +D+D++YPL+ E       GA +++   P Q PI PP++
Sbjct:   90 QGDITKASTAQEIIGHFEGEPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPEVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSMLNPLLDHSYH---GDFNQLEGPTRVI---VPFLACGDLSAYDSDRTYPLQLE-------GAHEYRYTPPAQPPISPPYQ 276          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: F6Q075_MONDO (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Monodelphis domestica TaxID=13616 RepID=F6Q075_MONDO)

HSP 1 Score: 243 bits (619), Expect = 2.580e-76
Identity = 126/200 (63.00%), Postives = 147/200 (73.50%), Query Frame = 0
Query:   16 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 215
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNI  HVL PGG+FVAKIFRGRDV LLYSQL + F  V  AKPRSSR+SSIE+F VCRGF  P G+ PSML P+LDHSY    G  N+  GPA V+   VPF+ACGDLS +D+D++YPL+ E G E       ++   P Q PI PP++
Sbjct:  110 QGDITKASTAQEIIGHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPDVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSMLNPLLDHSYH---GDFNQLEGPARVI---VPFLACGDLSAYDSDRTYPLQLEGGSE-------YRYTPPTQPPISPPYQ 296          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A4Z2C911_9TELE (FtsJ domain-containing protein n=2 Tax=Takifugu TaxID=31032 RepID=A0A4Z2C911_9TELE)

HSP 1 Score: 238 bits (607), Expect = 3.380e-76
Identity = 124/200 (62.00%), Postives = 146/200 (73.00%), Query Frame = 0
Query:   16 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 215
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL P GTFVAKIFRG+DV LLYSQL + F  VT AKPRSSR+SSIE+FVVC+ +  P GF P+M  P+LDHSY+      N+  GP  V+   VPF+ACGDLS FD+D++YPL+ E       G   ++   P Q PIRPP+E
Sbjct:   11 QGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPRGTFVAKIFRGKDVTLLYSQLKIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPTGFMPNMSNPLLDHSYNV---DFNQLEGPNRVI---VPFLACGDLSAFDSDRTYPLQLE-------GDQQYEYTPPTQPPIRPPYE 197          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A261Y7Q4_9FUNG (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y7Q4_9FUNG)

HSP 1 Score: 239 bits (610), Expect = 1.030e-75
Identity = 121/216 (56.02%), Postives = 155/216 (71.76%), Query Frame = 0
Query:    1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 216
            V L  + P +     QGDIT  STA+ II +F G LA++VVCDGAPDVTGLHDMDEY+QAQLLLAALNIT HVL PGGTFVAKIFRGRD+ LLY+Q+ + F +VT  KPRSSR+SSIE+F+VC+ +  P G+ P+M  P+LD  Y+ +    NE  GP  V+   +PF+ACGDLSGFD+D++YPL    G   + G   ++ LDP Q PI  P+++
Sbjct:   81 VDLQAMAPLEGVIQLQGDITKVSTAEQIISYFEGQLADIVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGRDISLLYAQMKIFFPKVTCCKPRSSRNSSIEAFIVCQNYAPPEGYVPNMSNPLLDLQYNDS----NELEGPNRVI---MPFIACGDLSGFDSDRTYPLNMS-GNRDSEGTKTYKSLDPVQAPISAPYKT 288          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A5N5SQ19_9CRUS (FtsJ domain-containing protein n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SQ19_9CRUS)

HSP 1 Score: 239 bits (610), Expect = 1.060e-75
Identity = 122/200 (61.00%), Postives = 151/200 (75.50%), Query Frame = 0
Query:   16 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 215
            QGDIT KSTA+AII+HF+G  A+LVV DGAPDVTGLHD+DEY+QAQLLLAALNIT H+L  GGTFVAKIFRG+DV LLYSQL L F+ V + KPRSSR+SSIESFVVC+ +  P G+EP+ML P+LDHSY        + +G   +  ++VPFVACGDLS +D+DK+YPL  E G++       ++ L P Q PI P +E
Sbjct:   80 QGDITKKSTAEAIIEHFQGEPAQLVVSDGAPDVTGLHDLDEYVQAQLLLAALNITTHILKRGGTFVAKIFRGKDVTLLYSQLKLFFKEVFVTKPRSSRNSSIESFVVCKNYSPPDGYEPTMLNPLLDHSYQ---DSFQDLVG---INRVIVPFVACGDLSAYDSDKTYPLELEGGKK-------YEYLPPTQPPISPAYE 266          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A6P3WG56_CLUHA (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Clupeidae TaxID=55118 RepID=A0A6P3WG56_CLUHA)

HSP 1 Score: 240 bits (612), Expect = 1.530e-75
Identity = 123/200 (61.50%), Postives = 147/200 (73.50%), Query Frame = 0
Query:   16 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 215
            QGDIT  STA+ II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL  GGTFVAKIFRG+DV LLYSQL + F RVT AKPRSSR+SSIE+FVVCR +  P G+ P+M  P+LDHSY       N+  GP     ++VPF+ACGDLS FD+D++YPL+ + G+E       +    P Q PI PP+E
Sbjct:   93 QGDITKLSTAEEIIKHFEGQSADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKTGGTFVAKIFRGKDVTLLYSQLRIFFSRVTCAKPRSSRNSSIEAFVVCRNYSPPEGYVPNMSNPLLDHSYDV---DFNQLEGPN---RIIVPFLACGDLSAFDSDRTYPLQLDSGKE-------YTYTPPTQPPIHPPYE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW8_ECTSI1.100e-10078.16Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A507E4B4_9FUNG8.560e-7957.87Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A3Q2T1E0_FUNHE5.170e-7763.00Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A0L0HEN0_SPIPD1.130e-7657.41Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
UPI001CFD5BE71.360e-7662.50putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
F6Q075_MONDO2.580e-7663.00Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A4Z2C911_9TELE3.380e-7662.00FtsJ domain-containing protein n=2 Tax=Takifugu Ta... [more]
A0A261Y7Q4_9FUNG1.030e-7556.02Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A5N5SQ19_9CRUS1.060e-7561.00FtsJ domain-containing protein n=1 Tax=Armadillidi... [more]
A0A6P3WG56_CLUHA1.530e-7561.50Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 2..130
e-value: 1.0E-37
score: 131.8
NoneNo IPR availablePANTHERPTHR10920RIBOSOMAL RNA METHYLTRANSFERASEcoord: 13..214
IPR002877Ribosomal RNA methyltransferase FtsJ domainPFAMPF01728FtsJcoord: 13..126
e-value: 1.6E-37
score: 129.3
IPR028590tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7PANTHERPTHR10920:SF12TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATEDcoord: 13..214
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 15..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58578contigH-elongata_contig58578:566..2278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58578.13346.1mRNA_H-elongata_contig58578.13346.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58578 566..2278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58578.13346.1 ID=prot_H-elongata_contig58578.13346.1|Name=mRNA_H-elongata_contig58578.13346.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTG
LHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLL
FERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPG
GVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDF
QRLDPPQMPIRPPHES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002877rRNA_MeTrfase_FtsJ_dom
IPR028590RNA_methyltr_E_Trm7
IPR029063SAM-dependent_MTases