prot_H-elongata_contig58489.13334.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58489.13334.1
Unique Nameprot_H-elongata_contig58489.13334.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
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BLAST of mRNA_H-elongata_contig58489.13334.1 vs. uniprot
Match: A0A6A6UG16_9PEZI (WSC domain-containing protein (Fragment) n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6UG16_9PEZI)

HSP 1 Score: 47.0 bits (110), Expect = 7.020e-6
Identity = 19/41 (46.34%), Postives = 24/41 (58.54%), Query Frame = 0 
Query:    3 QCFCGEATNDPTSLGSAICGLPCDGDSSQICGGH----IFT 39
            QCFCG   +    +  A C +PC+ DSSQICGG     +FT
Sbjct:   20 QCFCGNTISQSQPISEAACNMPCEDDSSQICGGSAALSLFT 60
[Close]
BLAST of mRNA_H-elongata_contig58489.13334.1 vs. uniprot
Match: S3D5C5_GLAL2 (WSC domain-containing protein n=2 Tax=Glarea lozoyensis TaxID=101852 RepID=S3D5C5_GLAL2)

HSP 1 Score: 48.5 bits (114), Expect = 2.500e-5
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 0 
Query:    3 QCFCGEATNDPTSLGSAICGLPCDGDSSQICGGHI 37
            QCFCG A +  T L  + C +PC+GDS+Q CGG +
Sbjct:  491 QCFCGNALSTTTPLDDSKCSMPCEGDSTQKCGGSL 525
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58489.13334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6A6UG16_9PEZI7.020e-646.34WSC domain-containing protein (Fragment) n=1 Tax=M... [more]
S3D5C5_GLAL22.500e-551.43WSC domain-containing protein n=2 Tax=Glarea lozoy... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58489contigH-elongata_contig58489:2706..2831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58489.13334.1mRNA_H-elongata_contig58489.13334.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58489 2706..2831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58489.13334.1 ID=prot_H-elongata_contig58489.13334.1|Name=mRNA_H-elongata_contig58489.13334.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
LQQCFCGEATNDPTSLGSAICGLPCDGDSSQICGGHIFTLE*
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