prot_H-elongata_contig58423.13328.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58423.13328.1 vs. uniprot
Match: A0A6H5KHJ6_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ6_9PHAE) HSP 1 Score: 257 bits (657), Expect = 3.320e-81 Identity = 161/273 (58.97%), Postives = 177/273 (64.84%), Query Frame = 0
Query: 1 DGRLSILRLEQLLKEKITSNKTFQVKSATGDLGGASRGAGVSGS--QALEIHAEAILMDCLRRIRVVRPASLFELLASIEVLGFELGQRAAVVAVDGMGSFYWQDKMAQGCGGEALVMQGAVVKALVRLVMERPVALFAAKTALFGSRGGAHDTEHREYLPQTWQRAVTYRILLRRRQRRRRSLPRLRGDESEPGDASALSLFTARVSRLR----QIGGRSGSXXXXXXXRARV----AGVAGEDRKLFSFVVSDDGIHHLPAAATLGGAEKW 263
DGRLSILRLEQLLK KI++N TFQVKSA+G +GG S S Q L+ E +L+ CLRR+RVVRPA LFELLA+IEVL FELG R AVV VDGMGSF+WQDKMAQ CGGEA+ MQG V KALVRL MERPV LFAAK G G TEHREYLPQ WQRAVT+R+LL+R ALSLFTARV LR GG GS RV AG GE R F FVV+DDGIH +PAAATLG E W
Sbjct: 94 DGRLSILRLEQLLKGKISNNTTFQVKSASGGVGGGGGTIHASPSRLQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKN---GKDLGDAATEHREYLPQIWQRAVTFRVLLQRXXXXXXXXXXXXXXXXXXXXXXALSLFTARVLSLRLAKGNYGGGGGSFKAAAAGAGRVGRYGAGGDGESRPYF-FVVTDDGIHDVPAAATLGEGEGW 362
BLAST of mRNA_H-elongata_contig58423.13328.1 vs. uniprot
Match: D7FPE2_ECTSI (Rad51 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE2_ECTSI) HSP 1 Score: 127 bits (320), Expect = 1.110e-32 Identity = 71/107 (66.36%), Postives = 82/107 (76.64%), Query Frame = 0
Query: 1 DGRLSILRLEQLLKEKITSNKTFQVKSATGDLGGASRGAGVSGS--QALEIHAEAILMDCLRRIRVVRPASLFELLASIEVLGFELGQRAAVVAVDGMGSFYWQDKM 105
DGRLSILRLEQLLK KI++N TFQVKSA+G +G S S Q L+ E +L+ CLRR+RVVRPA LFELLA+IEVL FELG R AVV VDGMGSF+WQDK+
Sbjct: 94 DGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVVVDGMGSFFWQDKV 200
BLAST of mRNA_H-elongata_contig58423.13328.1 vs. uniprot
Match: B3RU80_TRIAD (RECA_2 domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RU80_TRIAD) HSP 1 Score: 61.6 bits (148), Expect = 2.020e-7 Identity = 37/143 (25.87%), Postives = 67/143 (46.85%), Query Frame = 0
Query: 50 HAEAILMDCLRRIRVVRPASLFELLASIEVLGFELGQRA--AVVAVDGMGSFYWQDKMAQGCGGEALVMQGAVVKALVRLVMERPVALFAAKTAL------------------FGSRGGAHDTEHREYLPQTWQRAVTYRILL 172
H+E + CL R ++R ++ +L+ S+ +L + + ++ +DG+GSFYWQDK + G + L K + L E + + A K+A+ S + ++H EY+P W++ V YR +L
Sbjct: 116 HSEEFIRKCLERFYIIRCDTIHQLITSLHLLEYSISSNPDIGIMLIDGIGSFYWQDKFSSSSGVDQLC------KIVKYLCDEHNLIVLATKSAIRKQFENSRLANKSRLRNDIASNYNSTHSKHMEYMPNVWRKLVKYRYIL 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58423.13328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig58423.13328.1 ID=prot_H-elongata_contig58423.13328.1|Name=mRNA_H-elongata_contig58423.13328.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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