prot_H-elongata_contig58421.13327.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58421.13327.1
Unique Nameprot_H-elongata_contig58421.13327.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length222
Homology
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: D8LNN8_ECTSI (Eukaryotic translation initiation factor 3 subunit D n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN8_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 2.750e-129
Identity = 191/212 (90.09%), Postives = 198/212 (93.40%), Query Frame = 0
Query:    2 LFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQGKRKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQV 213
            LFLDKR+ SQLDYLTVNETAVDPP PG+DP NNINAPDRLSLEATMINQNFSQQILK G RK+ EMPNPFFDKDEAAPG  PAAIGYRYRKFQLG+NY+VVARCEVHGT VK GMK GEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGAD MKIGLVSRV+K NAYEH VLGTQSYKPREFATQ+
Sbjct:  300 LFLDKREASQLDYLTVNETAVDPPTPGDDPTNNINAPDRLSLEATMINQNFSQQILKPGNRKNLEMPNPFFDKDEAAPGMTPAAIGYRYRKFQLGANYTVVARCEVHGTAVKPGMKAGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIGLVSRVTKANAYEHVVLGTQSYKPREFATQI 511          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A835Z0I8_9STRA (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I8_9STRA)

HSP 1 Score: 297 bits (761), Expect = 3.950e-95
Identity = 148/218 (67.89%), Postives = 178/218 (81.65%), Query Frame = 0
Query:    2 LFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQGKRKSFEMPNPFFDKDEAAPG-TAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRVR 218
            LF+DKRD SQ D+LTVNETA D P   EDPEN IN PDRLSLEATMINQNFSQQILK G R +F+MPNPFF  +E A G + P+++ YRYR+F LG   ++VARCE+HG V     K GE+QYM+A+ALNEWDSKLAG V+WRQK+D+QRGA+LATELKNN+AKLAKWTAQSI++GAD MK+G VSR +K+NAY+H VLGTQ YKP +FA Q+ + VR
Sbjct:  294 LFMDKRDNSQFDFLTVNETAYDTPAVNEDPEN-INNPDRLSLEATMINQNFSQQILKDGARTTFDMPNPFFGDEEGAEGGSQPSSVAYRYRRFSLGPELNIVARCELHGIV----QKRGEQQYMTAYALNEWDSKLAGAVDWRQKLDSQRGAVLATELKNNAAKLAKWTAQSIIAGADQMKLGFVSRATKSNAYDHVVLGTQFYKPNDFARQITLDVR 506          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A6U1Q148_9STRA (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q148_9STRA)

HSP 1 Score: 283 bits (723), Expect = 4.250e-89
Identity = 140/219 (63.93%), Postives = 175/219 (79.91%), Query Frame = 0
Query:    2 LFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQG---KRKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGS-NYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVR 216
            LF DKRD SQ DYLTVNETA + P P +D  +NIN PDRL+LEATMINQNFSQ +LKQG   +RK  + PNPFFD+++A     PA + YRYR+F+ G  + +++ARCE++G+V+K G    ++QYM+ +ALNEWDSKL+   EWRQKIDTQRGAILATELKNNS KLAKWTAQSIL+GAD MKIG VSR S+TNAY+H +LGTQ +KP+EFATQ+ ++
Sbjct:  323 LFFDKRDNSQFDYLTVNETAYEAPAPNQDDPDNINNPDRLALEATMINQNFSQMVLKQGDESQRKEMDHPNPFFDEEDAEENMEPATLAYRYRRFKFGGGSINLIARCEINGSVLKRG----KQQYMTTYALNEWDSKLSNSEEWRQKIDTQRGAILATELKNNSCKLAKWTAQSILAGADQMKIGYVSRQSRTNAYDHVILGTQFFKPKEFATQITLQ 537          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A7S2P8F0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P8F0_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.040e-87
Identity = 143/224 (63.84%), Postives = 175/224 (78.12%), Query Frame = 0
Query:    2 LFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQGK-------RKSFEMPNPFFDKDE-AAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRV 217
            LF DKRD+SQ D+LTV+ETA  PP+  +D    IN+P+RLSLEAT INQNFSQQIL+Q K       RK+F++PNPF+D+D+ AA G  PA++ Y+YR+F LG +  +V RCE+HG V     K GE+Q M+AFALNEWDSKL+GG+ WR KIDTQRGA+LATELKNNS KLAKWTAQSIL+GAD MKIG VSRV+K+NAYEH +L TQ YKP+EFA Q  + V
Sbjct:  301 LFFDKRDSSQFDFLTVSETANQPPLRSDDDPEGINSPERLSLEATTINQNFSQQILRQSKTPNNQSHRKNFDLPNPFYDEDDGAANGMEPASVAYKYRRFTLG-DIKLVCRCELHGLV----QKRGEEQTMTAFALNEWDSKLSGGINWRDKIDTQRGAVLATELKNNSCKLAKWTAQSILAGADQMKIGYVSRVTKSNAYEHVILATQFYKPKEFAQQTTLSV 519          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A7S1BPB9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPB9_9STRA)

HSP 1 Score: 271 bits (692), Expect = 3.390e-84
Identity = 134/223 (60.09%), Postives = 168/223 (75.34%), Query Frame = 0
Query:    1 MLFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQG-----KRKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRVR 218
            +LF DKRD SQ D+LTV+ETA +PP   ++  N IN PDRLSLEAT INQNFSQQIL+ G      RK F++PNPFFD+D+A  G  PA++ YRYR+F LG    +V RCE+HG V K G      QYM+AFALNEWD  L+GG+ WR+KID+QRGA+LATE+KNNS K+AKWTAQSILSGAD MK+G VSR ++TNAY+H ++GTQ Y+P + A Q  + V+
Sbjct:  344 ILFFDKRDASQFDFLTVSETAYNPPSKSDEDSNGINTPDRLSLEATTINQNFSQQILRSGPQGAASRKQFDVPNPFFDEDDA-DGMEPASVAYRYRRFALGDAIKLVCRCELHGIVSKGG----SDQYMTAFALNEWDPTLSGGISWREKIDSQRGAVLATEIKNNSCKVAKWTAQSILSGADQMKVGFVSRTNRTNAYDHAIIGTQFYRPVDLAMQTAMSVQ 561          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A7S2GV78_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GV78_9STRA)

HSP 1 Score: 252 bits (644), Expect = 7.700e-79
Identity = 136/229 (59.39%), Postives = 166/229 (72.49%), Query Frame = 0
Query:    2 LFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQGK-RKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVK----AGMKPGEKQ-YMSAFALNEWDSKLAGG-------VEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRV 217
            LF DKRD+SQ DYLTVNETA +PP   +D  + IN P+RLSLEATMINQNF+QQILK  K R +F++PNPF+D D+   G  PA++ YRYRKF LG    +VAR E+HG V K    A +  G+   YM+A+ALNE+DS    G       + WR KID+QRGA+LATELKNNS KLAKWTAQS+L+GA  MKIG VSRVS  NAYEH VL TQ Y+P++FATQ+ + V
Sbjct:  167 LFFDKRDSSQFDYLTVNETANNPPSANDDDTDGINTPERLSLEATMINQNFTQQILKSSKTRTNFDLPNPFYDPDDN-DGMEPASVAYRYRKFDLGDGIQLVARTELHGVVKKKAAGAAVSSGDDPLYMTAYALNEFDSTKGPGHAPPSASINWRDKIDSQRGAVLATELKNNSFKLAKWTAQSVLAGASQMKIGFVSRVSPKNAYEHTVLATQFYRPKDFATQITLSV 394          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A7S2CZZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZZ7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.770e-78
Identity = 127/217 (58.53%), Postives = 164/217 (75.58%), Query Frame = 0
Query:    2 LFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQGK-RKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRV 217
            +F DKRD SQ DYLTV+ETA +PP   ED +  IN P++LSLEA++INQNF+QQIL   K R+  + PNPF+D++E+ PG  PA++ +RYRKF       +V RCE+HGTV K G    EKQYM+A+ALNEWDSK + G+EWRQKID QRGA+LATELKNNS KLAKWT QS+++GAD MKIG VSR  +T+ + H +L TQ YKP++F+ Q+ + V
Sbjct:  138 IFFDKRDDSQFDYLTVSETAYEPPAVSEDADA-INTPEKLSLEASVINQNFTQQILHGEKGRQQMDDPNPFYDEEES-PGMEPASVAFRYRKFTF-PGIELVVRCELHGTVTKRG----EKQYMTAYALNEWDSKHSAGIEWRQKIDQQRGAVLATELKNNSCKLAKWTCQSMIAGADQMKIGYVSRKGRTDPHHHQILATQFYKPQDFSMQINLSV 347          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A8J2SUE1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUE1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.980e-77
Identity = 136/235 (57.87%), Postives = 167/235 (71.06%), Query Frame = 0
Query:    1 MLFLDKRDTSQLDYLTVNETAVDPPVPGED------------------PENNINAPDRLSLEATMINQNFSQQILKQGKRKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRV 217
            +L  DKRDT+  DYLTV+ET+ DPP   E+                  P ++IN PD+LS+EATMINQNFSQQIL     +   +PNPF D + A     PA++ YRYRKFQLG  +++VAR EVH  V K G    + Q M+AFALNEWDSKL+GGVEWRQKID QRGA+LATELKNNS KLA+WTAQSIL+GA+ MK+G VSRV++TN Y+H VL TQ YKP+EFATQ+ + V
Sbjct:  295 VLVFDKRDTANFDYLTVSETSHDPPKSLEEIEEAKRFDRRRNKKEDDEPTSDINTPDKLSIEATMINQNFSQQILSDKAPEKMSLPNPFADTENAE--AKPASLAYRYRKFQLGE-HALVARTEVHAVVDKRG----DLQKMTAFALNEWDSKLSGGVEWRQKIDAQRGAVLATELKNNSCKLARWTAQSILAGAEQMKLGYVSRVARTNPYDHVVLATQFYKPKEFATQITLNV 522          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: A0A7S2EJG1_9STRA (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EJG1_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.720e-77
Identity = 133/226 (58.85%), Postives = 164/226 (72.57%), Query Frame = 0
Query:    1 MLFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQGK-RKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEK-QYMSAFALNEWDSKLAGG-------VEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRV 217
            +LF DKRD+SQ DYLTVNETA +PP   +D  + IN P+RLSLEATMINQNF+QQILK  K R +F++PNPF+D D+   G  PA++ YRYRKF LG    +VAR E+HG V K      E  QYM+A+ALNE+DS    G       + WR KID+QRGA+LATELKNNS KLAKWTAQS+L+GA  MKIG VSR +  NAYEH +L TQ Y+P++FATQ+ + V
Sbjct:  299 LLFFDKRDSSQFDYLTVNETANNPPSKSDDDPDGINTPERLSLEATMINQNFTQQILKSSKTRTNFDLPNPFYDPDDN-DGMEPASVAYRYRKFDLGDGIQLVARTELHGLVKKKTTGGSEDTQYMTAYALNEFDSAKGPGHAPSTASINWRDKIDSQRGAVLATELKNNSFKLAKWTAQSVLAGASQMKIGFVSRAAPKNAYEHTILATQFYRPKDFATQITLSV 523          
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Match: F0YJC3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC3_AURAN)

HSP 1 Score: 248 bits (634), Expect = 3.570e-76
Identity = 132/217 (60.83%), Postives = 164/217 (75.58%), Query Frame = 0
Query:    2 LFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQNFSQQILKQGKR-KSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYSVVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLGTQSYKPREFATQVRVRV 217
            L  DKRDT+  D+LTV+ET+ +PP     P + IN P++LS+EATMINQNFSQQILK     +   +PNPF D   A   + PA++ YRYRKF LG  +++VAR E+HG V K G    EK  M+A+ LNEWDSKL+GGVEWRQKID+QRGA+LATELKNNS KLA+WTAQSIL+GA+ MK+G VSRV++TN Y+H VL TQ YKPREFATQ+ + V
Sbjct:  295 LVFDKRDTAAFDFLTVSETSHEPP-----PADEINTPEKLSIEATMINQNFSQQILKTDPAPEKMALPNPFAD---AESESKPASMAYRYRKFALGE-HTIVARTELHGLVEKRG----EKHKMTAYCLNEWDSKLSGGVEWRQKIDSQRGAVLATELKNNSCKLARWTAQSILAGAEQMKLGYVSRVARTNPYDHVVLATQFYKPREFATQITLNV 498          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58421.13327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNN8_ECTSI2.750e-12990.09Eukaryotic translation initiation factor 3 subunit... [more]
A0A835Z0I8_9STRA3.950e-9567.89Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U1Q148_9STRA4.250e-8963.93Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2P8F0_9STRA3.040e-8763.84Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1BPB9_9STRA3.390e-8460.09Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2GV78_9STRA7.700e-7959.39Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2CZZ7_9STRA3.770e-7858.53Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A8J2SUE1_9STRA1.980e-7757.87Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2EJG1_9STRA2.720e-7758.85Eukaryotic translation initiation factor 3 subunit... [more]
F0YJC3_AURAN3.570e-7660.83Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007783Eukaryotic translation initiation factor 3 subunit DPFAMPF05091eIF-3_zetacoord: 2..217
e-value: 6.2E-87
score: 292.7
IPR007783Eukaryotic translation initiation factor 3 subunit DPANTHERPTHR12399EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7coord: 1..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58421contigH-elongata_contig58421:273..3581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58421.13327.1mRNA_H-elongata_contig58421.13327.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58421 273..3596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58421.13327.1 ID=prot_H-elongata_contig58421.13327.1|Name=mRNA_H-elongata_contig58421.13327.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp
MLFLDKRDTSQLDYLTVNETAVDPPVPGEDPENNINAPDRLSLEATMINQ
NFSQQILKQGKRKSFEMPNPFFDKDEAAPGTAPAAIGYRYRKFQLGSNYS
VVARCEVHGTVVKAGMKPGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQR
GAILATELKNNSAKLAKWTAQSILSGADLMKIGLVSRVSKTNAYEHYVLG
TQSYKPREFATQVRVRVRYKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007783eIF3d