mRNA_H-elongata_contig58400.13326.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: D7G0E9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0E9_ECTSI) HSP 1 Score: 388 bits (996), Expect = 5.760e-120 Identity = 246/425 (57.88%), Postives = 273/425 (64.24%), Query Frame = 1
Query: 358 EVAFKPTVILPNVSRAPSNSQDTYAYEEEQERLAMLKSLHRPMRRWFGED--PALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWSSETDA-AEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
+ +F P I +RAP S+DTYAYEEEQERL MLK+LH+PMR+WF +D A+ +R+G FPMFWQ A ATAEA XXXXXXXXXRWGD RKNRF++K+DDE E A PPP+K RKSRWSSE DA A ALP A GVS IPGMPVNL+QEQIQE LVL +RL QANEKLATV+QDA+ RS DP+RSPSPPPRYD+NG+RTN RNVRMR +LNRER KVIEEMMKLNPMF+PP DFVKTKP+RKLYIP+DEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGP IDEDDELHVY+SGETEE VEK
Sbjct: 276 QFSFVPAAIETPTARAPPASEDTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQGAA-----------------------ATAEA-------------------------------------------------------------GAAGEXXXXXXXXXRWGDV-RKNRFASKNDDEAESA------------PPPNK-RKSRWSSEGDAQAVALPGA-------GVSKN-IPGMPVNLTQEQIQENLVLHMRLQQANEKLATVEQDAIARSTDPDRSPSPPPRYDANGVRTNNRNVRMRASLNRERTKVIEEMMKLNPMFKPPADFVKTKPHRKLYIPTDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKA 594
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: A0A835ZI00_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI00_9STRA) HSP 1 Score: 291 bits (746), Expect = 2.150e-88 Identity = 192/439 (43.74%), Postives = 250/439 (56.95%), Query Frame = 1
Query: 361 VAFKPTVILPNVSRAPSNSQDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALG-QRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAP----MAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTE------------GPPPSKARKSRWSSETDAAEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARR-GPTVIDEDDELHVYISGETEETVEKV 1623
V P P AP + +DTY YE EQER A LK +H+PMR W+G+ + Q G FP FWQDL W P +++K +A++ A A+G D P A D P V ++ D +A RWG+A +K+R+ +K + E G PS R++RWS+E +AV ++ ++ G IPG+P +L+QEQIQETLVLQ+RL Q E++ATV QDA+ R DP ++PSPPPRY+S+G R N R VRMREAL+ ER +IE+M+KLNP+++PP D+VK KP+RKLYIP EYPGYNFIGLIIGPRGNTQKRMERE+ CKIAIRG+GSVKEGARR G +DE+D+LHVY+ G+TEE VEK
Sbjct: 50 VVAXPAXXXPESPAAP-DPEDTYHYEAEQERQAELKHMHQPMRVWYGKVGGVKIQSWGAFPRFWQDLDKWSPYKQVKP-EAMAVD-------AAAADGVDVKPEDNGAAADGVKPEVTAAADGEDGEAGTKRKRKN---------------------------------------RWGEA-KKSRWGDKAPGDAPTGVSTPEEAXXXXXXXXXXXXXXXXGEKPS--RRNRWSAE----------NAVPNLASLAAGGIPGLPPDLTQEQIQETLVLQMRLKQVTERMATVAQDALERENDPNKTPSPPPRYNSDGKRMNTREVRMREALDLERGNIIEDMIKLNPLYQPPVDYVKRKPSRKLYIPIREYPGYNFIGLIIGPRGNTQKRMERESGCKIAIRGRGSVKEGARRTGVKSVDEEDDLHVYVQGDTEEQVEKA 427
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: A0A3R7HAI3_9STRA (Branchpoint-bridging protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HAI3_9STRA) HSP 1 Score: 248 bits (632), Expect = 4.760e-73 Identity = 156/402 (38.81%), Postives = 217/402 (53.98%), Query Frame = 1
Query: 421 DTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQ-ATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWSSETDAAEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
D Y YEE+QER AM+KS H PM++WF + L ++G FP+FWQ++ +W P RE+ + Y+ E ++P+ A E E + E P D+ K+ RWGD VE AG +K +KSRW+ P SA V+G+ L+Q+Q Q+T+VL+ L N K+ TV DA +DP RSPSPPP+YDSNG RTN R VRM+EAL + R + I++++K+NP+FRPP D+ + + +RK+YIP +++P YNFIGLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++ T DE+D+LHV I+GE ++ +++
Sbjct: 28 DEYHYEEQQEREAMMKSYHHPMKQWFRQKSWLETKYGPFPLFWQEMKTWEPYREVLKAYIRFTEHGDDPESAEKEIEAAATVEKKDGETQPETRDAPPKKKRKS-----------------------------------------------RWGDP-------------VEPAGADGE----------TKRKKSRWA---------PTPSAASTVAGL-----------LTQKQ-QQTVVLRAELDNINMKIKTVAMDAARIEKDPNRSPSPPPQYDSNGKRTNTREVRMKEALEKRRRETIDQLVKVNPLFRPPADYTRQRLHRKIYIPINDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKTNADENDDLHVLITGENDDDLDRA 338
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: D0N463_PHYIT (Branchpoint-bridging protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N463_PHYIT) HSP 1 Score: 251 bits (640), Expect = 3.260e-72 Identity = 159/421 (37.77%), Postives = 217/421 (51.54%), Query Frame = 1
Query: 364 AFKPTVILPNVSRAPSNSQDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWSSETD-AAEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
AF TV +A N +D Y YEEEQE+ AM+K+ H PM++WF + P L ++G FP+FWQ+L +W P RE+++ Y+ E + ++T + E NV ++ + D E A P K RKSRW + AA+ + GA GM L E+ Q++++L+ L N+KL TV DA + +DP RSPSPPP+YDSNG RTN R VRM+ AL + R + IEE++K+NP+FRPP D+ + K NR++YIP E+P YNFIGLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++ DE+D+LHV I+G+ EE ++K
Sbjct: 11 AFMETVGGDKPKQAVDNPKDEYHYEEEQEKEAMMKNYHHPMKQWFRQRPQLEAKYGAFPLFWQELKTWEPYREVRKAYIKFTEHGGDVESTEKKE--------------NV---------------------------------------------------------------VGMDKQEKRGDTTTEPAEEQ-----------PKKRRKSRWGEPVESAADGSGEXXXXXXXXAPASGASSGMT-GLFNEKQQQSVILRAELETINQKLKTVVMDAALVEKDPSRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLNRRIYIPIHEFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKA 342
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: W2RB66_PHYPN (Branchpoint-bridging protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RB66_PHYPN) HSP 1 Score: 241 bits (616), Expect = 1.030e-70 Identity = 157/424 (37.03%), Postives = 214/424 (50.47%), Query Frame = 1
Query: 364 AFKPTVILPNVSRAPSNSQDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWS----SETDAAEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
AF TV + +D Y YEEEQE+ AM+K+ H PM++WF + P L ++G FP+FWQ+L +W P RE+ + Y+ E GD P A +K +KD + + A E P K RKSRW S D + A+ G+ L+Q+Q Q++++L+ +L N+KL TV DA + +DP RSPSPPP+YDSNG RTN R VRM+ AL + R + IEE++K+NP+FRPP D+ + K +RK+YIP ++P YNFIGLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++ DE+D+LHV I+G+ EE ++K
Sbjct: 11 AFMATVGGDKPKQTEDKPKDEYHYEEEQEKEAMMKNYHHPMKQWFRQRPQLEAKYGAFPLFWQELKTWEPYREVLKAYIKFTEH---------------------------GDDVEP--------------------------------------------------------AEKKENTRDKDKQKEDAATTKPAEEQ------PKKRRKSRWGDPVESGADGNGEXXXXXXXXAPTSSGASAMTGL---LNQKQ-QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKA 341
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: W2LI46_PHYPR (Branchpoint-bridging protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LI46_PHYPR) HSP 1 Score: 241 bits (615), Expect = 5.110e-69 Identity = 157/424 (37.03%), Postives = 214/424 (50.47%), Query Frame = 1
Query: 364 AFKPTVILPNVSRAPSNSQDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWS----SETDAAEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
AF TV + +D Y YEEEQE+ AM+K+ H PM++WF + P L ++G FP+FWQ+L +W P RE+ + Y+ E GD P A +K +KD + + A E P K RKSRW S D + A+ G+ L+Q+Q Q++++L+ +L N+KL TV DA + +DP RSPSPPP+YDSNG RTN R VRM+ AL + R + IEE++K+NP+FRPP D+ + K +RK+YIP ++P YNFIGLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++ DE+D+LHV I+G+ EE ++K
Sbjct: 11 AFMATVGGDKPKQTEDKPKDEYHYEEEQEKEAMMKNYHHPMKQWFRQRPQLEAKYGAFPLFWQELKTWEPYREVLKAYIKFTEH---------------------------GDDVEP--------------------------------------------------------AEKKENTRDKDKHKEDAATTKPAEEQ------PKKRRKSRWGDPVESGADGNGEXXXXXXXXAPTSSGASAMTGL---LNQKQ-QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKA 341
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: A0A8K1CGS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGS9_PYTOL) HSP 1 Score: 243 bits (619), Expect = 5.630e-69 Identity = 158/407 (38.82%), Postives = 212/407 (52.09%), Query Frame = 1
Query: 415 SQDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWSS---ETDAAEALPVASAVVGVSGVSGGAIPGMP-VNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
S D Y YEEEQER AM+K+ H PM+ WF +P L + +G FP+FWQDL W P RE+ + YL E EGG G+ + DE + ++ KA D + GSG P + RKSRW ET A E G+ P VN+ +Q Q+T+ L+ +L KL TV DA +DP RSPSPPP+YD+NG RTN R VRMR AL ++R +V++EM+KLNP+FRPP D+++ K +RK+YIP +++P YNFIGLIIGPRGNTQKRME+ET+C+IAIRG+GSVKEG++ DE+D+LHV I+GE E+ +++
Sbjct: 38 SVDEYGYEEEQEREAMMKTYHHPMKTWFRVNPHLTETYGQFPLFWQDLKKWTPYREVLKKYL------------RETEGG-GSKASTDEXXXXXXXEAKATETKAQ-------------------------------------------------------------DTATTPSAVTTESGSGEA---PKRRRKSRWGDAVEETSAVETNTGEQXXXXXXXXPAGSTPAANLVNILTQQQQQTVALRAKLDVIGLKLQTVAVDAARIEKDPTRSPSPPPQYDANGKRTNTREVRMRAALEKQRQEVMDEMVKLNPLFRPPADYMRQKLSRKVYIPVNDFPNYNFIGLIIGPRGNTQKRMEKETNCRIAIRGRGSVKEGSKGKKVNADENDDLHVLITGEREDDIDRA 367
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: W2RDP1_PHYPN (Branchpoint-bridging protein n=22 Tax=Phytophthora TaxID=4783 RepID=W2RDP1_PHYPN) HSP 1 Score: 241 bits (616), Expect = 1.070e-68 Identity = 157/424 (37.03%), Postives = 214/424 (50.47%), Query Frame = 1
Query: 364 AFKPTVILPNVSRAPSNSQDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWS----SETDAAEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
AF TV + +D Y YEEEQE+ AM+K+ H PM++WF + P L ++G FP+FWQ+L +W P RE+ + Y+ E GD P A +K +KD + + A E P K RKSRW S D + A+ G+ L+Q+Q Q++++L+ +L N+KL TV DA + +DP RSPSPPP+YDSNG RTN R VRM+ AL + R + IEE++K+NP+FRPP D+ + K +RK+YIP ++P YNFIGLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++ DE+D+LHV I+G+ EE ++K
Sbjct: 11 AFMATVGGDKPKQTEDKPKDEYHYEEEQEKEAMMKNYHHPMKQWFRQRPQLEAKYGAFPLFWQELKTWEPYREVLKAYIKFTEH---------------------------GDDVEP--------------------------------------------------------AEKKENTRDKDKQKEDAATTKPAEEQ------PKKRRKSRWGDPVESGADGNGEXXXXXXXXAPTSSGASAMTGL---LNQKQ-QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKA 341
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: A0A662YI91_9STRA (Branchpoint-bridging protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YI91_9STRA) HSP 1 Score: 241 bits (616), Expect = 4.690e-68 Identity = 158/418 (37.80%), Postives = 218/418 (52.15%), Query Frame = 1
Query: 388 PNVSRAPSNS-QDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAM---PNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWSS--ETDAAEALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
P + N+ D Y YEE+QER AM+K+ H PM++WF + P+L +++G FP+FWQ+L +W P RE+ + ++ E E D A +DE P +S P+ A GD + VE G PP K RKSRW E EA + A + LSQ+Q Q+T+VL+ +L +K+ TV DA +DP RSPSPPP+YDSNG RTN R VRM+ AL + R + I++++K+NP+FRPP D+++ K +RK+YIP ++P YNFIGLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++ DE+D+LHV I+GE E+ +++
Sbjct: 41 PQAEKTQGNAVADEYHYEEQQEREAMMKNYHHPMKQWFRQKPSLAEKYGPFPLFWQELKTWEPYREVLKTFIRFTEHGE-----------DAADPLKDETTTQDPATSTTSTPAVVSA-------------------------------------------------GDTGKS----------VEEGGA-----------PPKKRRKSRWGDPVEPTGPEANGEKPXXXXXXAPAPSATATVANLLSQKQ-QQTIVLRAQLDSIGQKMKTVTADAARLEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIDQLVKVNPLFRPPADYMRQKLHRKIYIPIKDFPAYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKVNADENDDLHVLITGEREDDIDRA 376
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Match: H3GZH0_PHYRM (Branchpoint-bridging protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZH0_PHYRM) HSP 1 Score: 238 bits (607), Expect = 2.290e-67 Identity = 156/414 (37.68%), Postives = 210/414 (50.72%), Query Frame = 1
Query: 418 QDTYAYEEEQERLAMLKSLHRPMRRWFGEDPALGQRHGMFPMFWQDLASWPPMRELKRLYLVAIERKENPQATAEAEGGDGAPMAEDEAMPNVGDSSAPSDDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWGDAARKNRFSNKDDDEVEVAGXXXXEGSGTEGPPPSKARKSRWSSETDAAE------------ALPVASAVVGVSGVSGGAIPGMPVNLSQEQIQETLVLQVRLTQANEKLATVDQDAVVRSQDPERSPSPPPRYDSNGIRTNPRNVRMREALNRERNKVIEEMMKLNPMFRPPPDFVKTKPNRKLYIPSDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPTVIDEDDELHVYISGETEETVEKV 1623
QD Y YEE+QE+ AM+KS H PM++WF + P L ++G FP+FWQ+L +W P RE+ + Y+ E G+ PS+ K + A K + E A E P K RKSRW + + P SA ++G+ L+Q+Q Q+T+VL+ +L N KL TV DA + +DP RSPSPPP+YDSNG RTN R VRMR AL + R + I++++K NP+FRPP D+ + K NRK+YIP ++PGYNFIGLIIGPRGNTQKRME+ET+CKIAIRGKGSVKEG++ DE+D+LHV I+G+ EE +E+
Sbjct: 10 QDEYHYEEQQEKEAMMKSYHHPMKQWFRQRPQLKTKYGAFPLFWQELKTWEPYREVLKAYIKFTEH---------------------------GEDVEPSEKKNE-------------------------------------------------EPADKEKQGXXXXXXXEDAPQATEE-------KPKKRRKSRWGDPVEPTDDGSGEKXXXXXXXAPAPSASSTMAGL-----------LTQKQ-QQTVVLRSQLDNINLKLKTVAMDAALIEKDPNRSPSPPPQYDSNGKRTNTREVRMRAALEKRRCETIDQLVKANPLFRPPADYTRQKLNRKIYIPIKDFPGYNFIGLIIGPRGNTQKRMEQETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDNEENLERA 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58400.13326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58400.13326.1 >prot_H-elongata_contig58400.13326.1 ID=prot_H-elongata_contig58400.13326.1|Name=mRNA_H-elongata_contig58400.13326.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=550bp SNDDKDLASFFSSFEVEEFGDGAAARGAGSPVKGSTPAGENAGKDTSCVTback to top mRNA from alignment at H-elongata_contig58400:2..3477+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58400.13326.1 ID=mRNA_H-elongata_contig58400.13326.1|Name=mRNA_H-elongata_contig58400.13326.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3476bp|location=Sequence derived from alignment at H-elongata_contig58400:2..3477+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58400:2..3477+ >mRNA_H-elongata_contig58400.13326.1 ID=mRNA_H-elongata_contig58400.13326.1|Name=mRNA_H-elongata_contig58400.13326.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3300bp|location=Sequence derived from alignment at H-elongata_contig58400:2..3477+ (Himanthalia elongata Himel1 dioecious)back to top |