mRNA_H-elongata_contig58346.13318.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig58346.13318.1
Unique NamemRNA_H-elongata_contig58346.13318.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 521 bits (1342), Expect = 3.340e-181
Identity = 266/406 (65.52%), Postives = 310/406 (76.35%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECLGVLGGGEKERE 1218
            MA  TV KLR+AL++RAG+I+A R+P A DE P+ GE+L+SEQL SV AE F+ELGN++QTPVQHE+P ETTLEK GAK+ARIST GKEKERFTL LAVMAD  KV  RIIFKGTPF PP   GKGK   PRK  +A E+ P NR K GHPA GMSFGVQEKSW D REC  WIS SW+LRPNNGSI+ QRP ILVLDDFKCH+D  FI  L++  NT VI IPG LTPLLQPLDRMLNKQMK+LLR KYTAY+A+A+AD  +GKLKPP RG+VSTWCK+A  + TP+ VKTCF ICGLTL LDGSEDHAWC  NFG+ YR+LL++ R VW   H  V LPPL+LP+VP G    +NPIT A+KEV+G+LLP     ++DS+VE+LE           GGG  E E
Sbjct:   63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 504 bits (1299), Expect = 4.070e-173
Identity = 263/411 (63.99%), Postives = 299/411 (72.75%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARIST--------------------------KGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
            MA  T+ KLRKALLERAG+I+A+R P A  E P+ GE+LSS QLE VT E F++LGN++QTPVQ+EMP ETTLEK GAK+ARI+T                           GKEKERFTLCLAV AD +KVPLRIIFKGTPF PP  PGKGK  QPRK  IA EV P NR+K G P  GMSFGVQEKSWCD RE  LWI +SW+LRPNNGS++ QR  ILVLDDFKCH+D  FI  L++  NT VI IPGGLTPLLQPLDRMLNKQMK+LLR  YTA+TA A  DP TGKL PPGRG V+TWCK A A+ITP+ VKTCFKICGLTL LDGSEDHAWC+ NFG GYRELL++ RV W   HP V LPPLQLP+VP       N I  A KE++  LLP    R +DSD+E+
Sbjct:  150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAGLLP----RGDDSDIEI 554          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 495 bits (1275), Expect = 3.720e-169
Identity = 252/375 (67.20%), Postives = 289/375 (77.07%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTG 1125
            +A  T+ KLR ALLERAG+I+A RNP AS E P+ G++LS  QLESV  E F+ELGN++QTPVQ EMP ETTLEK GAK+ARIST GKEKERFTLCLAVMAD  KVPLRIIFKG PF PP+   +GK  QPRKG IAAEV P N+T FG+P +GMSFGVQE+SW DA ECTLW+SESW  RPN+GS+I QR SILVLDDF              R NT+VILIPGGLTPLLQPLDRML+K+MK+L+R +YT Y A+AIADP TGKL+PPGRG+VSTWCK++ AAIT + VK CFK+CGLTL LDGSED AWC  NFG+GYRE+L + R  W    PGV LPPLQLPEV      G NPI  AEKEV  +LLPP G
Sbjct:  236 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEVSSAS--GANPIATAEKEVTAKLLPPEG 594          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 488 bits (1257), Expect = 8.790e-169
Identity = 258/434 (59.45%), Postives = 302/434 (69.59%), Query Frame = 1
Query:   16 VKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGEL---------------------------------IGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECLGVLGGGEKERE 1218
            V KLR+AL++RAG+I+A R+P A DE P+ GE+L+SEQL SV AE F++LGN++QTPVQHEMP ETTLEK GAK+AR+ST G+EKERFTL LAV AD  KV LRIIF GTPF PP   GKGK   PRK  +A E+ P NR K GHPA GMSFGVQEKSW D REC  W S SW+LRPNNGSI+ QRP ILVLDDFKCH+D  FI  L++  NT VI IPGGLTPLLQPLDRMLNKQ K+LLR KYTAY+A+A  D  +GKLKPP RG+VSTWCK A  +ITP+ VKTCFKICGLTL LDGSEDHAWC  NFG+ YR+LL++   VW   HP V LPPL+LP+VP                                       +NPI  A+KEV+G+LLP     ++DS+VE+LE           GGG  E E
Sbjct:    2 VMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVPD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 433          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 488 bits (1257), Expect = 1.170e-166
Identity = 254/385 (65.97%), Postives = 285/385 (74.03%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
            MA  T+ KLRKALLERAGKI+A+R P A  E P+ GE+LSS QLE VT E F+ELGN++QTPVQHE P E  L KR  +    S     +ERFTLCLAV AD  KVPLRIIFKGTPF PP  PGKGK  QPRK  IA EV P NR+K G P  GMSFGVQEKSWCD REC LWI +SW+LRPNNGSI+ QR  ILVLDDFKCH+D  FI  L++  NT VI IPGGLTPLLQPLDRMLNKQMK+LLR  YTA+TA A  DP TGKL PPGRG V+TWCK A A+ITP+  KTCFKICGLTL LDGSEDHAWC+ NFG GYRELL++ RV W   HP V LPPLQLP+VP       N I  A KE++  LLP    R +DSD+E+
Sbjct:  187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKRPVRRMPASP---PEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAGLLP----RGDDSDIEI 561          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 501 bits (1291), Expect = 3.600e-165
Identity = 267/453 (58.94%), Postives = 314/453 (69.32%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLR------------------------------------------------EKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECL-----GVLGG 1200
            +A  T+ KLR ALLERAG+I+A RNP AS E P+ G++L+  QLESV A+ F+ELGN++QTPVQ EMP ETTLEKRG K+ARIST GKEK+RFT CLAVMAD  KVP RIIFKG PF PP+  G+ K  Q RKGYIAAEV   NRTKFG+P +GM F VQEKSWCDARECTLW+SESWR RPN+GS+I QR SILVLDDF+CHR  +F+ DLR+R NT+VILIPGGLTPLLQPLDRMLNK+MK+L+R                                                   T Y A+AIADP TGKL+PPGRG+VST  K++ AAITP+ VK CFK+CGLTL LDGSED AW   NFG+GYRE+L +    W+  HPGV LPPLQLPEV      G NPI  AEKEV  +LLPP G   +D +VE+++ DSD+E L     G  GG
Sbjct:  132 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEVSSAP--GANPIATAEKEVTAKLLPPEGD--SDDEVEIIDGDSDVELLDGPWVGAAGG 580          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 2.320e-157
Identity = 243/385 (63.12%), Postives = 271/385 (70.39%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
            MA  T+ KLRKALLERAG+I+A+R P A  E P+ GE+LSS QLE VT E F+ELGN++QTPVQHE                    GKEKERFTLCLAV AD  KVPLRIIFKGTPF PP  PGKGK  QPRK  IA EV P NR+K G P  GMSFGVQEKSWCD REC LWI  SW+LRPNNGSI+ QR  ILVLDDFKCH+D  FI  L++  NT VI IPGGLTPLLQ LDRMLNKQMK+LL              P TGKL PPGRG V+TWCK A A+ITP+ VKTCFKICGLTL LDGSEDHAWC+ NFG GYRELL++ RV W   HP V LPPLQLP+VP       N I  A KE++  LLP    R +DSD+E+
Sbjct:  204 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHER----------------DAGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAELLP----RGDDSDIEI 566          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 477 bits (1228), Expect = 1.660e-155
Identity = 264/489 (53.99%), Postives = 297/489 (60.74%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLV--------------------------------------------------------------------------------------------------------LDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVEL 1155
            MA  T+ KLRKALLERAG+I+A+R P A  E P+ GE+LSS QLE VT E F+ELGN++QTPVQHEMP ETTLE  GAK+ARI+T GKEKERFTLCLAV AD  KVPLRIIFKGTPF PP  PGKGK  QPRK  IA EV P NR+K G P  GMSFGVQEKSWCD REC LWI +SW+LRPNNGSI+ QR  ILVLDDFKCH+D  FI  L++  NT VI IPGGL PL QPLDRMLNKQMK+LLR  YTA+TA A  DP TGKL PPGRG V+TWCK A A+ITP++VKTCFKICGLTL                                                                                                         LDGSEDHAWC+ NFG GYRELL++ RV W   HP V LPPLQLP+VP       N I  A KE++  LLP    R +DSD+E+
Sbjct:  217 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKPGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST--ANHIEAAAKELEAGLLP----RGDDSDIEI 699          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.630e-153
Identity = 250/414 (60.39%), Postives = 289/414 (69.81%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRL--------RPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*LPPLQLPEVPDGELIGTNPITVAEKEVQGRLLPPTGGRKNDSDVELLEYDSDLECLGVLGGGEKERE 1218
            MA  TV KLR+AL++RAG+I+A R+P A DE P+ GE+L+SEQ  SV AE F+ELGN++QTPVQHEMP ETTLE  G K+ARIST GKEKERFTL LAVMAD   V   IIFKGTPF PP   GKGK   PRK  +A EV P NR K GHPA GMSFGVQEKSW   +EC  WI  SW+L        RPNNGSI+ QRP ILVLDDFKCH+D  FI  L +  NT VI IPGGLTPLLQPLDRMLNKQMK+LLR KYTAY+A A+AD  +GKLKPP RG+VSTWCK+A   +T + V TCFKICGLTL LDGSEDHA C     +                HP V LPPL+LP+VP+G    +NPIT A+KEV+G+LLP     ++DS+VE+LE           GGG  E E
Sbjct:  217 MAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA-CTPCIAE----------------HPDVTLPPLKLPKVPEG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 610          
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 4.310e-153
Identity = 231/359 (64.35%), Postives = 265/359 (73.82%), Query Frame = 1
Query:    1 MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAECFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVMADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGHPAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDFKCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKYTAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVV-----------------------------KTCFKICGLTLVLDGSEDHAWCMQNFGKGYRELLQKPRVV 990
            MA  TV KLR+AL+ RAG+I+A R+P A DE P+ GE+L+ EQL SV AE F+ELGN++QTPVQHEMP ETTLEK GAK+ARIST GKEKERFTL LAVMAD  KV  RIIFKGTPF PP   GKGK   PRK  +A E+ P NR K  HPA GMSFGVQEKSW D REC  WIS SW+LRPNNGSI+ QRP ILVLDDFKCH+D  +I  L++  NT VI+IPGGLTPLLQPLDRMLNKQMK+LLR KYTAY+A+A+AD  +GKLKPP RG+VSTWCK+A  +ITP+ V                             KTCFKICGLTL LDGSEDHAWC  NFG+ YR+LL++   V
Sbjct:   63 MAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQYAV 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58346.13318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE3.340e-18165.52DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE4.070e-17363.99DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE3.720e-16967.20DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE8.790e-16959.45DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE1.170e-16665.97DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE3.600e-16558.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEE8_9PHAE2.320e-15763.12DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.660e-15553.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE1.630e-15360.39DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE4.310e-15364.35DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58346contigH-elongata_contig58346:1003..2449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.2
Seed ortholog evalue3.4e-98
Seed eggNOG ortholog2880.D7FXD3
Preferred namePOGK
KEGG koko:K09228
EggNOG free text desc.DNA binding
EggNOG OGsKOG3105@1,KOG3105@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Exons2
Model size1218
Cds size1017
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58346.13318.1prot_H-elongata_contig58346.13318.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig58346 1003..2248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930946.231224-CDS-H-elongata_contig58346:1002..12611622930946.231224-CDS-H-elongata_contig58346:1002..1261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58346 1003..1261 +
1691679635.7497525-CDS-H-elongata_contig58346:1002..12611691679635.7497525-CDS-H-elongata_contig58346:1002..1261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58346 1003..1261 +
1622930946.2568948-CDS-H-elongata_contig58346:1490..22481622930946.2568948-CDS-H-elongata_contig58346:1490..2248Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58346 1491..2248 +
1691679635.763116-CDS-H-elongata_contig58346:1490..22481691679635.763116-CDS-H-elongata_contig58346:1490..2248Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58346 1491..2248 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930946.2774563-UTR-H-elongata_contig58346:2248..24491622930946.2774563-UTR-H-elongata_contig58346:2248..2449Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58346 2249..2449 +
1691679635.7728143-UTR-H-elongata_contig58346:2248..24491691679635.7728143-UTR-H-elongata_contig58346:2248..2449Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig58346 2249..2449 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig58346.13318.1

>prot_H-elongata_contig58346.13318.1 ID=prot_H-elongata_contig58346.13318.1|Name=mRNA_H-elongata_contig58346.13318.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=339bp
MALGTVKKLRKALLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAE
CFQELGNINQTPVQHEMPGETTLEKRGAKNARISTKGKEKERFTLCLAVM
ADCSKVPLRIIFKGTPFNPPNKPGKGKIIQPRKGYIAAEVAPGNRTKFGH
PAAGMSFGVQEKSWCDARECTLWISESWRLRPNNGSIITQRPSILVLDDF
KCHRDVAFIVDLRKRCNTSVILIPGGLTPLLQPLDRMLNKQMKQLLREKY
TAYTATAIADPTTGKLKPPGRGMVSTWCKKALAAITPDVVKTCFKICGLT
LVLDGSEDHAWCMQNFGKGYRELLQKPRVVWKEAHPGV*
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mRNA from alignment at H-elongata_contig58346:1003..2449+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig58346.13318.1 ID=mRNA_H-elongata_contig58346.13318.1|Name=mRNA_H-elongata_contig58346.13318.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1447bp|location=Sequence derived from alignment at H-elongata_contig58346:1003..2449+ (Himanthalia elongata Himel1 dioecious)
ATGGCGCTTGGAACAGTGAAGAAGCTTCGGAAGGCTCTTCTGGAGCGCGC TGGCAAAATCTTCGCTGAGCGCAACCCGTGTGCTTCTGATGAGCTTCCCG TGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCAGTGACGGCGGAG TGTTTCCAAGAACTCGGCAATATAAACCAGACGCCCGTCCAGCACGAGAT GCCGGGGGAGACAACTCTGGAGAAGCGTGGTGCGAAGAATGCTCGCATCA GCACAAAAGGTGAAAGTATTGCGGCTGCGTGCTTGTCGATAGTATGTATT TTGCATCGTTTTAATGTTTTTATTGTACGGTTGCTGCTGCTGCTGCTGCC ACGACGCGTTTTTTTTTTCTCTGGATGGTAGGTATTTTTGGCACCGTAAA ATACCCCCACATCGTGAATACGAAGTATAGATCAAAACCTTCAATTGTAG CCCCCTCCCGCCCTCTCTTTGTGTCGACTCCCCCGTAGGCAAGGAGAAGG AGCGCTTCACTCTCTGTCTTGCTGTCATGGCGGACTGTAGCAAGGTTCCG CTACGCATCATCTTCAAAGGCACGCCGTTCAACCCGCCGAACAAGCCGGG GAAGGGCAAAATAATTCAGCCGCGGAAGGGGTACATTGCGGCAGAGGTTG CCCCTGGGAATCGTACCAAGTTCGGGCACCCCGCGGCGGGCATGTCGTTT GGTGTGCAGGAAAAAAGCTGGTGTGACGCGCGGGAGTGCACCCTTTGGAT CTCGGAGAGCTGGAGGCTTCGCCCTAACAACGGAAGCATCATCACGCAGC GCCCGAGCATCCTGGTGTTGGACGACTTCAAGTGCCACCGTGACGTGGCC TTCATCGTTGACCTCCGGAAGAGGTGCAACACCAGCGTCATCCTGATCCC GGGCGGGTTGACTCCTCTCCTCCAGCCGCTGGACCGCATGCTCAACAAGC AGATGAAGCAGCTACTGCGGGAGAAGTACACCGCCTACACTGCCACAGCG ATTGCCGACCCAACTACGGGCAAGCTGAAGCCGCCGGGCCGTGGGATGGT GTCCACGTGGTGCAAGAAGGCATTGGCAGCCATCACCCCCGACGTAGTCA AAACTTGCTTCAAGATCTGCGGTCTTACGCTTGTGCTTGACGGCAGCGAG GACCACGCCTGGTGCATGCAAAACTTCGGTAAGGGTTACCGCGAGCTGCT CCAGAAGCCGCGCGTTGTGTGGAAGGAAGCACACCCCGGCGTTTAGCTGC CCCCGCTCCAGCTACCAGAGGTACCCGACGGCGAGTTGATCGGCACCAAC CCCATCACGGTTGCCGAGAAGGAGGTTCAAGGACGTCTGCTACCTCCTAC CGGTGGGAGGAAAAACGACAGCGATGTGGAGCTGCTGGAATATGACAGCG ATCTAGAGTGCTTAGGCGTGTTGGGGGGTGGGGAGAAGGAAAGAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig58346:1003..2449+

>mRNA_H-elongata_contig58346.13318.1 ID=mRNA_H-elongata_contig58346.13318.1|Name=mRNA_H-elongata_contig58346.13318.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2034bp|location=Sequence derived from alignment at H-elongata_contig58346:1003..2449+ (Himanthalia elongata Himel1 dioecious)
ATGGCGCTTGGAACAGTGAAGAAGCTTCGGAAGGCTCTTCTGGAGCGCGC
TGGCAAAATCTTCGCTGAGCGCAACCCGTGTGCTTCTGATGAGCTTCCCG
TGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCAGTGACGGCGGAG
TGTTTCCAAGAACTCGGCAATATAAACCAGACGCCCGTCCAGCACGAGAT
GCCGGGGGAGACAACTCTGGAGAAGCGTGGTGCGAAGAATGCTCGCATCA
GCACAAAAGATGGCGCTTGGAACAGTGAAGAAGCTTCGGAAGGCTCTTCT
GGAGCGCGCTGGCAAAATCTTCGCTGAGCGCAACCCGTGTGCTTCTGATG
AGCTTCCCGTGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCAGTG
ACGGCGGAGTGTTTCCAAGAACTCGGCAATATAAACCAGACGCCCGTCCA
GCACGAGATGCCGGGGGAGACAACTCTGGAGAAGCGTGGTGCGAAGAATG
CTCGCATCAGCACAAAAGGCAAGGAGAAGGAGCGCTTCACTCTCTGTCTT
GCTGTCATGGCGGACTGTAGCAAGGTTCCGCTACGCATCATCTTCAAAGG
CACGCCGTTCAACCCGCCGAACAAGCCGGGGAAGGGCAAAATAATTCAGC
CGCGGAAGGGGTACATTGCGGCAGAGGTTGCCCCTGGGAATCGTACCAAG
TTCGGGCACCCCGCGGCGGGCATGTCGTTTGGTGTGCAGGAAAAAAGCTG
GTGTGACGCGCGGGAGTGCACCCTTTGGATCTCGGAGAGCTGGAGGCTTC
GCCCTAACAACGGAAGCATCATCACGCAGCGCCCGAGCATCCTGGTGTTG
GACGACTTCAAGTGCCACCGTGACGTGGCCTTCATCGTTGACCTCCGGAA
GAGGTGCAACACCAGCGTCATCCTGATCCCGGGCGGGTTGACTCCTCTCC
TCCAGCCGCTGGACCGCATGCTCAACAAGCAGATGAAGCAGCTACTGCGG
GAGAAGTACACCGCCTACACTGCCACAGCGATTGCCGACCCAACTACGGG
CAAGCTGAAGCCGCCGGGCCGTGGGATGGTGTCCACGTGGTGCAAGAAGG
CATTGGCAGCCATCACCCCCGACGTAGTCAAAACTTGCTTCAAGATCTGC
GGTCTTACGCTTGTGCTTGACGGCAGCGAGGACCACGCCTGGTGCATGCA
AAACTTCGGTAAGGGTTACCGCGAGCTGCTCCAGAAGCCGCGCGTTGTGT
GGAAGGAAGCACACCCCGGCGTTTAGGCAAGGAGAAGGAGCGCTTCACTC
TCTGTCTTGCTGTCATGGCGGACTGTAGCAAGGTTCCGCTACGCATCATC
TTCAAAGGCACGCCGTTCAACCCGCCGAACAAGCCGGGGAAGGGCAAAAT
AATTCAGCCGCGGAAGGGGTACATTGCGGCAGAGGTTGCCCCTGGGAATC
GTACCAAGTTCGGGCACCCCGCGGCGGGCATGTCGTTTGGTGTGCAGGAA
AAAAGCTGGTGTGACGCGCGGGAGTGCACCCTTTGGATCTCGGAGAGCTG
GAGGCTTCGCCCTAACAACGGAAGCATCATCACGCAGCGCCCGAGCATCC
TGGTGTTGGACGACTTCAAGTGCCACCGTGACGTGGCCTTCATCGTTGAC
CTCCGGAAGAGGTGCAACACCAGCGTCATCCTGATCCCGGGCGGGTTGAC
TCCTCTCCTCCAGCCGCTGGACCGCATGCTCAACAAGCAGATGAAGCAGC
TACTGCGGGAGAAGTACACCGCCTACACTGCCACAGCGATTGCCGACCCA
ACTACGGGCAAGCTGAAGCCGCCGGGCCGTGGGATGGTGTCCACGTGGTG
CAAGAAGGCATTGGCAGCCATCACCCCCGACGTAGTCAAAACTTGCTTCA
AGATCTGCGGTCTTACGCTTGTGCTTGACGGCAGCGAGGACCACGCCTGG
TGCATGCAAAACTTCGGTAAGGGTTACCGCGAGCTGCTCCAGAAGCCGCG
CGTTGTGTGGAAGGAAGCACACCCCGGCGTTTAG
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