prot_H-elongata_contig58304.13311.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58304.13311.1
Unique Nameprot_H-elongata_contig58304.13311.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length218
Homology
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A6H5KT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT12_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 9.280e-114
Identity = 175/219 (79.91%), Postives = 191/219 (87.21%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESA-SKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            MNKTYLRYELSETFG+VASPQSNV++DSTGNLAISAALH++AVWNLRQCSLVRLL+PEGESA S+ QVT+LLLSP+G TVAAGYSSG++LLFSL TGATAVTLHGHRSAVTA RYH+SGALLASGSADTD+VVWD V+ESGLYRL+GHRDGVTDVVFLEG   G G A           CR    L NGLASCSKD LVKLWDLDTQSCVQT+VGHRGE
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHEVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGRTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLEG---GGGGAPGG--------CR----LRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGE 204          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 1.540e-103
Identity = 172/219 (78.54%), Postives = 189/219 (86.30%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESA-SKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            MNKTYLRYELSETFG+VASPQSNV++DSTGNLAISAALHD+AVWNLRQCSLVRLL+PEGESA S+ QVT+LLLSP+G+TVAAGYSSG++LLFSL TGATAVTLHGHRSAVTA RYH+SGALLASGSADTD+VVWD V+ESGLYRL+GHRDGVTDVVFL       G+            CR    L NGLASCSKD LVKLWDLDTQSCVQT+VGHRGE
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGSTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFL-------GSGGXXXXXVVPGGCR----LRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGE 208          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA)

HSP 1 Score: 239 bits (611), Expect = 4.520e-70
Identity = 124/218 (56.88%), Postives = 155/218 (71.10%), Query Frame = 0
Query:    3 KTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESAS--KGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            KTYLRY L +TFG++AS QSN +FD TGNLAI+AAL ++AVWNLRQ +L+R+L PEG+ A+  KGQV+ L LSPNG  VAAGY++G++ ++ + TGA AV  +GH+SAVTA R++  GALL SG ADTDV++WD V+E G  RL+GHRDGVTDV FL       G A                 L  G  SCSKD LVK+WDL+TQ CVQT+VGHR E
Sbjct:    2 KTYLRYVLHDTFGVIASTQSNAVFDKTGNLAITAALQEVAVWNLRQGTLLRMLKPEGDEATIAKGQVSYLALSPNGRRVAAGYTTGVIRVYDVATGAMAVAFNGHKSAVTAARFNDGGALLISGGADTDVILWDMVAERGECRLRGHRDGVTDVAFLPA-----GGA-----------------LARGAVSCSKDTLVKIWDLETQHCVQTVVGHRSE 197          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA)

HSP 1 Score: 192 bits (488), Expect = 5.810e-53
Identity = 113/220 (51.36%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESASKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSG--ALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            M K+YLRYE    FG+VA+   NVIFD TG LAI+ AL D+ VWN+RQ S VR L  +G     GQ T L LSP+G  VAAGYS+G + +F L TGA  VTL GH SAV A  + + G  A+LASG+ DTDV+VWD VS++GL+RLKGH+D VT + F+ GER                           L + SKD+L+K+WDLDTQ CVQT VGHR E
Sbjct:    1 MVKSYLRYERETAFGVVAAAAGNVIFDRTGRLAIAPALKDVVVWNVRQGSFVRALRGDG-----GQATALALSPDGALVAAGYSTGAVRVFRLATGALEVTLDGHASAVEALAFGARGGAAVLASGARDTDVIVWDLVSQTGLFRLKGHKDAVTALRFV-GERDAR------------------------LVTASKDSLLKVWDLDTQHCVQTCVGHRSE 190          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A6U0TFN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TFN6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.860e-50
Identity = 100/220 (45.45%), Postives = 136/220 (61.82%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESAS--KGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            MN+TYLRY   ++FG++ +P+ N I   + +LAI+ AL D AVWNL+Q SLV+ L PEG S    + +  + LL    + VAAGY+SG+L +FSL  G   + LHGHR+ VTA    +  A LA+G+ DTDVVVWDT+SE+G+ RLKGHR  +T V FL+G   G     +                  GL S S+DAL+K+WD+  Q C+QT+ GHR E
Sbjct:   24 MNRTYLRYVPQQSFGVICTPRGNSILGESEDLAITPALRDAAVWNLKQGSLVKRLRPEGGSGGVQEAEEVSQLLLLGRDRVAAGYTSGLLRVFSLSEGRQELALHGHRTEVTALSCSTDAAFLATGAKDTDVVVWDTISETGVCRLKGHRHAITAVSFLQGRDSGTSVGFF------------------GLVSASQDALLKIWDVTAQHCLQTVTGHRAE 225          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A433A2H4_9FUNG (WD40-repeat-containing domain protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433A2H4_9FUNG)

HSP 1 Score: 169 bits (427), Expect = 2.410e-48
Identity = 100/236 (42.37%), Postives = 131/236 (55.51%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESASKGQVTNLLLSPNGNTVAAGY------------------SSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            M K YLRYE   TFG++AS QSN I++  G LAI+ AL D+ VW+L++ + V   +   ES +K +VT +  SPN    A GY                  + G + L+S  T   +VT +GHRSAVTA  +  +G  LASGS DTD++VWD V E GLYRL+GH+D +T + FL          T  D               N L S SKD L+KLWDL TQ CV+T++ HRGE
Sbjct:    1 MVKAYLRYEPKATFGIIASVQSNAIYNRDGKLAIAPALEDVVVWDLKKGTQVAKWH---ESTNKAEVTCIARSPNEVDYAVGYVFFSPALHHSRMNPFVPYNDGSIRLWSFKTSTCSVTFNGHRSAVTALAFDKNGTRLASGSRDTDLIVWDVVGEVGLYRLRGHKDQITCLYFLT-------RPTATDSATDATNATTTTATSNYLLSSSKDTLLKLWDLTTQHCVETLIAHRGE 226          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A7S1XLU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.200e-47
Identity = 97/221 (43.89%), Postives = 135/221 (61.09%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGES--ASKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRG-NGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            M +TYLRY     FG++A+P+ N ++     LA++ +L D+ VW+L+Q SL+R L PE  +      +V +L L P G  VAAGY+SG+L +F   TG   +  HGHRSAVT     + GA LA+G++DTDVVVWD V+E+G+ RL+GHR  VT V FL+ +  G NGA  +                  G+ S S+DALVK+WD+  Q C+QT+ GHR E
Sbjct:   34 MQRTYLRYVPEHAFGVIATPRGNSLYAEGDQLALTPSLRDVGVWHLKQGSLLRRLTPESTTPGTEAEEVASLTLLPGGR-VAAGYTSGVLRVFDYKTGTQELAFHGHRSAVTCADGTADGAFLATGASDTDVVVWDAVAETGVCRLRGHRGAVTAVAFLQPKGSGGNGAGFF------------------GVVSASQDALVKVWDVAAQHCLQTVTGHRAE 235          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A2G5BKB0_COERN (WD40 repeat-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKB0_COERN)

HSP 1 Score: 173 bits (438), Expect = 3.720e-46
Identity = 89/218 (40.83%), Postives = 134/218 (61.47%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESASKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            M K+YLRYE   +FG+++SP  N +FD +G  +I+ AL  + VW++++ + +       +S +K +VT +  SPNG   A GY+ G + LF L +    V L+GHR +++A  + S+G +LASG+ DTDV++WD V E+GLYRL+GH+D +TD+ F+E     NG +T  +   +             + + SKD LVKLWDL  Q CVQT+V HR E
Sbjct:    1 MVKSYLRYEAHSSFGVISSPSGNAVFDHSGRYSITPALEKVIVWDIKKGTKIAQW---ADSDNKAEVTRIARSPNGKDYAVGYADGSIRLFDLSSNRVNVVLNGHRGSLSALVFDSTGTILASGARDTDVIIWDVVGEAGLYRLRGHKDEITDIAFVEPA---NGPSTALNASTK-----------GHVVTSSKDTLVKLWDLRAQHCVQTLVTHRSE 201          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A485L7V7_9STRA (Aste57867_17075 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7V7_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.020e-44
Identity = 84/155 (54.19%), Postives = 109/155 (70.32%), Query Frame = 0
Query:    3 KTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESASKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFL 157
            K+YLRY    +FG++ SP +  ++D TG LAI  AL  + VWN+R  + VR L  E ES + GQVT L LSP+G  VAAGYSSGI+ +F L  G   VTL GH+++V +  Y  +GALLASGS DTD++VWD VS+SGLYRL+GH+D VT + FL
Sbjct:   19 KSYLRYSAESSFGVICSPNARCVYDLTGQLAICGALKSVIVWNIRTGAQVRTLKGESESDTAGQVTALCLSPDGLYVAAGYSSGIVRIFKLSNGNVEVTLDGHKNSVESLVYGDNGALLASGSRDTDIIVWDVVSQSGLYRLRGHKDAVTALTFL 173          
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Match: A0A015LAN4_RHIIW (Dip2p n=2 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015LAN4_RHIIW)

HSP 1 Score: 158 bits (400), Expect = 7.130e-43
Identity = 85/218 (38.99%), Postives = 132/218 (60.55%), Query Frame = 0
Query:    1 MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCSLVRLLNPEGESASKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAVTLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDGVTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 218
            M K+YLRYE  +TFG++ S  SN +F     LAI+ AL D+A+W+L++  L+   +   +  +K +V  +  SPN    A GY+ G + +++++T ++++  +GHR AVTA  +  +G  LASGS DTD+++WD V E GLYR++GH+D VT + F+     G G  + +   +  +           L S SKD L+KLWDL TQ C++T+V HR E
Sbjct:    1 MVKSYLRYEPCKTFGVITSSLSNAVFSGDDKLAIAPALEDVAIWDLKKGILIGKWH---DVDNKSEVIVIAKSPNKIDYAVGYADGSIRIWNIETSSSSIIFNGHRGAVTALTFDKTGTRLASGSKDTDLIIWDIVGEVGLYRMRGHKDQVTSIQFISRPLLG-GHKSKDMTSSSGY-----------LLSSSKDTLLKLWDLSTQHCMETVVAHRSE 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58304.13311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT12_9PHAE9.280e-11479.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS39_ECTSI1.540e-10378.54Utp12 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835Z9P3_9STRA4.520e-7056.88WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A5D6Y6H3_9STRA5.810e-5351.36Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
A0A6U0TFN6_9STRA1.860e-5045.45Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A433A2H4_9FUNG2.410e-4842.37WD40-repeat-containing domain protein (Fragment) n... [more]
A0A7S1XLU6_9STRA1.200e-4743.89Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2G5BKB0_COERN3.720e-4640.83WD40 repeat-like protein n=1 Tax=Coemansia reversa... [more]
A0A485L7V7_9STRA2.020e-4454.19Aste57867_17075 protein n=1 Tax=Aphanomyces stella... [more]
A0A015LAN4_RHIIW7.130e-4338.99Dip2p n=2 Tax=Rhizophagus irregularis (strain DAOM... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 95..134
e-value: 1.0E-5
score: 35.0
coord: 48..92
e-value: 4.3
score: 13.0
coord: 137..202
e-value: 0.0083
score: 25.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 101..134
e-value: 1.8E-4
score: 22.2
coord: 141..202
e-value: 0.081
score: 13.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 102..143
score: 13.516
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 189..211
score: 9.339
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 7..182
e-value: 9.1E-27
score: 96.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 183..218
e-value: 1.1E-6
score: 29.6
NoneNo IPR availablePANTHERPTHR19853:SF0WD REPEAT-CONTAINING PROTEIN 3coord: 1..218
NoneNo IPR availablePANTHERPTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3coord: 1..218
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 121..135
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 189..203
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 60..218
score: 19.275
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 22..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58304contigH-elongata_contig58304:1422..2883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58304.13311.1mRNA_H-elongata_contig58304.13311.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58304 1422..2883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58304.13311.1 ID=prot_H-elongata_contig58304.13311.1|Name=mRNA_H-elongata_contig58304.13311.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
MNKTYLRYELSETFGLVASPQSNVIFDSTGNLAISAALHDIAVWNLRQCS
LVRLLNPEGESASKGQVTNLLLSPNGNTVAAGYSSGILLLFSLDTGATAV
TLHGHRSAVTAGRYHSSGALLASGSADTDVVVWDTVSESGLYRLKGHRDG
VTDVVFLEGERRGNGAATYEDEGAQQWRCRRRRRLPNGLASCSKDALVKL
WDLDTQSCVQTIVGHRGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf