prot_H-elongata_contig58278.13309.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58278.13309.1
Unique Nameprot_H-elongata_contig58278.13309.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A1D6NUI8_MAIZE (Pre-mRNA-processing-splicing factor 8A n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6NUI8_MAIZE)

HSP 1 Score: 395 bits (1014), Expect = 3.880e-136
Identity = 176/195 (90.26%), Postives = 188/195 (96.41%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLKVLLYT 195
            DLKHLIYYRFNTGPVGKGPGCGFWAP WRVW+FFLRG+VPL+ERWLGNLLARQFEGRHSKG+AK+VTKQRVESHFDLELRAAVMHD+LD MPEG+K NK+RTILQHLSEAWRCWKANIPWKVPGLP PIENMILRYVK+KADWWTN+AHYNRERIRRGATVDKTVC+KNLGRLTRLWLKAEQERQHNYLK +  T
Sbjct:  195 DLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDVAQT 389          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A3L6V125_9STRA (PROCN domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V125_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 2.700e-135
Identity = 181/190 (95.26%), Postives = 189/190 (99.47%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 190
            DLKHLIYYRFNTGPVGKGPGCGFWAP WRVW+FFLRG+VPL+ERWLGNLLARQFEGRHSKGIAK+VTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLP+PIENMILRYVK+KADWWTN+AHYNRERI+RGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK
Sbjct:  278 DLKHLIYYRFNTGPVGKGPGCGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPSPIENMILRYVKSKADWWTNVAHYNRERIKRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 467          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A7S0V611_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V611_9CRYP)

HSP 1 Score: 397 bits (1019), Expect = 1.340e-133
Identity = 179/190 (94.21%), Postives = 187/190 (98.42%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 190
            DLKHLIYYRFNTGPVGKGPG GFWAPGWRVW+FFLRGVVPL+ERWLGNLLARQFEGRHSKG+AK+VTKQRVESH+DLELRAAVMHDILDMMPEGVK NKS+TILQHLSEAWRCWKANIPWKVPG+P PIENMILRYVKAKADWWTN+AHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK
Sbjct:  110 DLKHLIYYRFNTGPVGKGPGVGFWAPGWRVWLFFLRGVVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHYDLELRAAVMHDILDMMPEGVKQNKSKTILQHLSEAWRCWKANIPWKVPGMPIPIENMILRYVKAKADWWTNVAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 299          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A7S3ARS0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ARS0_9EUKA)

HSP 1 Score: 395 bits (1015), Expect = 2.810e-133
Identity = 180/190 (94.74%), Postives = 187/190 (98.42%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 190
            DLKHLIYYRFNTGPVGKGPGCG WAPGWRVW+FFLRGVVPL+ERWLGNLLARQFEGR SKGIAK+VTKQRVESH+DLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPG+PAPIENMILRYVK+KADWWTN+AHYNRERIRRGATVDKTV KKNLGRLTRLWLKAEQERQHNYLK
Sbjct:   14 DLKHLIYYRFNTGPVGKGPGCGIWAPGWRVWLFFLRGVVPLLERWLGNLLARQFEGRSSKGIAKTVTKQRVESHYDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGMPAPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVTKKNLGRLTRLWLKAEQERQHNYLK 203          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A7L3HCZ3_9PASS (PRP8 factor (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L3HCZ3_9PASS)

HSP 1 Score: 400 bits (1027), Expect = 4.160e-133
Identity = 180/193 (93.26%), Postives = 189/193 (97.93%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLKVLL 193
            DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVW+FF+RG+ PL+ERWLGNLLARQFEGRHSKG+AK+VTKQRVESHFDLELRAAVMHDILDMMPEG+K NK+RTILQHLSEAWRCWKANIPWKVPGLP PIENMILRYVKAKADWWTN AHYNRERIRRGATVDKTVCKKNLGRLTRL+LKAEQERQHNYLKVLL
Sbjct:  444 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKVLL 636          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A2R7WFD6_ONCFA (PROCN domain-containing protein n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7WFD6_ONCFA)

HSP 1 Score: 382 bits (982), Expect = 1.710e-131
Identity = 171/194 (88.14%), Postives = 184/194 (94.85%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLKVLLY 194
            DLKHLIYYRFNTGPVGKGPGCG WAPGWRVW+FF+RG+ PL+ERWLGNLL+RQFEGRHSKG+AK+VTKQRVESHFDLELRA+VMHDI+DMMPEG+K NK+RTILQHLSEAWR WKAN PWKVPGLP PIENMILRYVK KADWWTN AHYNRERIRRGATVDKTVCKKNLGRLTRL+LKAEQERQHNYLKV  +
Sbjct:  172 DLKHLIYYRFNTGPVGKGPGCGIWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRNWKANTPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKVAYF 365          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A3L6VBU4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VBU4_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 2.280e-131
Identity = 181/190 (95.26%), Postives = 189/190 (99.47%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 190
            DLKHLIYYRFNTGPVGKGPGCGFWAP WRVW+FFLRG+VPL+ERWLGNLLARQFEGRHSKGIAK+VTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLP+PIENMILRYVK+KADWWTN+AHYNRERI+RGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK
Sbjct:  635 DLKHLIYYRFNTGPVGKGPGCGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPSPIENMILRYVKSKADWWTNVAHYNRERIKRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 824          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A7S0F341_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F341_9EUKA)

HSP 1 Score: 397 bits (1021), Expect = 2.620e-131
Identity = 181/190 (95.26%), Postives = 188/190 (98.95%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 190
            DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVW+FFLRGVVPL+ERWLGNLLARQFEGR SKGIAK+VTKQRVESH+DLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPG+PAPIENMILRYVK+KADWWTN+AHYNRERIRRGATVDKTV KKNLGRLTRLWLKAEQERQHNYLK
Sbjct:  623 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFLRGVVPLLERWLGNLLARQFEGRSSKGIAKTVTKQRVESHYDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGMPAPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVTKKNLGRLTRLWLKAEQERQHNYLK 812          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A6G3MJ01_HENSL (Pre-mRNA-processing-splicing factor 8 (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MJ01_HENSL)

HSP 1 Score: 377 bits (969), Expect = 2.730e-131
Identity = 167/190 (87.89%), Postives = 182/190 (95.79%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLK 190
            DLKHLIYYRFNTGPVGKGPG GFW P WRVW+FF+RG+VPL+ERWLGNLLARQFEGR SKG+AK++TKQRVESH+DLELRAAVMHDI DMMPEG++ NK+RTILQHLSEAWRCWKANIPWK+PGLP P+ENMILRYVKAKADWWTN +HYNRERIRRGATVDKTVCKKNLGRLTRL+LKAEQERQHNYLK
Sbjct:   49 DLKHLIYYRFNTGPVGKGPGMGFWGPSWRVWVFFMRGIVPLLERWLGNLLARQFEGRLSKGVAKTITKQRVESHYDLELRAAVMHDICDMMPEGIRQNKARTILQHLSEAWRCWKANIPWKIPGLPIPVENMILRYVKAKADWWTNTSHYNRERIRRGATVDKTVCKKNLGRLTRLFLKAEQERQHNYLK 238          
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Match: A0A850XJ11_PIACA (PRP8 factor (Fragment) n=1 Tax=Piaya cayana TaxID=33601 RepID=A0A850XJ11_PIACA)

HSP 1 Score: 400 bits (1027), Expect = 2.970e-131
Identity = 180/193 (93.26%), Postives = 189/193 (97.93%), Query Frame = 0
Query:    1 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLLARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKSRTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHYNRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLKVLL 193
            DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVW+FF+RG+ PL+ERWLGNLLARQFEGRHSKG+AK+VTKQRVESHFDLELRAAVMHDILDMMPEG+K NK+RTILQHLSEAWRCWKANIPWKVPGLP PIENMILRYVKAKADWWTN AHYNRERIRRGATVDKTVCKKNLGRLTRL+LKAEQERQHNYLKVLL
Sbjct:  242 DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKVLL 434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58278.13309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D6NUI8_MAIZE3.880e-13690.26Pre-mRNA-processing-splicing factor 8A n=2 Tax=Zea... [more]
A0A3L6V125_9STRA2.700e-13595.26PROCN domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S0V611_9CRYP1.340e-13394.21Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S3ARS0_9EUKA2.810e-13394.74Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7L3HCZ3_9PASS4.160e-13393.26PRP8 factor (Fragment) n=4 Tax=Neognathae TaxID=88... [more]
A0A2R7WFD6_ONCFA1.710e-13188.14PROCN domain-containing protein n=1 Tax=Oncopeltus... [more]
A0A3L6VBU4_9STRA2.280e-13195.26Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7S0F341_9EUKA2.620e-13195.26Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A6G3MJ01_HENSL2.730e-13187.89Pre-mRNA-processing-splicing factor 8 (Trinotate p... [more]
A0A850XJ11_PIACA2.970e-13193.26PRP8 factor (Fragment) n=1 Tax=Piaya cayana TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012592PROCN domainPFAMPF08083PROCNcoord: 1..190
e-value: 7.3E-115
score: 383.9
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 1..191
NoneNo IPR availablePANTHERPTHR11140:SF1coord: 1..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58278contigH-elongata_contig58278:344..3260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58278.13309.1mRNA_H-elongata_contig58278.13309.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58278 344..3260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58278.13309.1 ID=prot_H-elongata_contig58278.13309.1|Name=mRNA_H-elongata_contig58278.13309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
DLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFLRGVVPLIERWLGNLL
ARQFEGRHSKGIAKSVTKQRVESHFDLELRAAVMHDILDMMPEGVKANKS
RTILQHLSEAWRCWKANIPWKVPGLPAPIENMILRYVKAKADWWTNIAHY
NRERIRRGATVDKTVCKKNLGRLTRLWLKAEQERQHNYLKVLLYTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012592PROCN
IPR027652PRP8