prot_H-elongata_contig58249.13306.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58249.13306.1
Unique Nameprot_H-elongata_contig58249.13306.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58249.13306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 63..77
score: 44.35
coord: 15..30
score: 39.45
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 14..43
e-value: 0.0021
score: 27.3
coord: 47..76
e-value: 0.0013
score: 28.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 14..46
score: 11.568
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 47..79
score: 12.823
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 5..78
e-value: 8.4E-14
score: 51.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..79
score: 24.48
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..102
e-value: 1.8E-26
score: 94.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..90
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 3..82
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 3..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58249contigH-elongata_contig58249:394..2895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58249.13306.1mRNA_H-elongata_contig58249.13306.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58249 394..2895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58249.13306.1 ID=prot_H-elongata_contig58249.13306.1|Name=mRNA_H-elongata_contig58249.13306.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
VKTQGADPSWKSTKGATALHFACNAGHYDCTIQLLRVGVDVDAGNSTGTT
PLIIAAFGAHISCVGLLLEHGADPNVRDNLGRKAGDSLCELDVHRELGEV
AAGGGATIAGNEMFSATRALLGVARAQRAAVAQSGSSLVGTGTG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf