prot_H-elongata_contig58183.13298.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58183.13298.1
Unique Nameprot_H-elongata_contig58183.13298.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.110e-11
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATLVRDRG 43
            G+  EA+PLY RA+E+GE  LGPDHPDLATWLNN A L+R +G
Sbjct:    8 GEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLLRKQG 50          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: A0A7S3NLA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLA4_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.240e-11
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATLVRDRG 43
            GK DEA+PL +RA+EIGE  LGP+HPDL +WLNNLA L+ ++G
Sbjct:    1 GKYDEAKPLVQRAIEIGEESLGPNHPDLVSWLNNLAVLLINQG 43          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 58.9 bits (141), Expect = 3.400e-9
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATL 38
            GK +EAEPLY+RA++I E VLGPDHP +AT LNNLA L
Sbjct:    5 GKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: A0A6H5L045_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L045_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 7.660e-9
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATLVR 40
            GK  EA+PLY RA++IG+ +LGPDHPDLA WLNN A L++
Sbjct:   10 GKYAEADPLYLRAIDIGKKMLGPDHPDLAAWLNNRAGLLK 49          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 9.580e-9
Identity = 27/36 (75.00%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLA 36
            GK +EA+PLY RAVEIGE  LGPDHP LA WLNN A
Sbjct:    8 GKYEEADPLYLRAVEIGEKTLGPDHPTLAVWLNNKA 43          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: UPI0019337E49 (tetratricopeptide repeat-containing protein n=1 Tax=Frankia sp. AgW1.1 TaxID=1836971 RepID=UPI0019337E49)

HSP 1 Score: 57.8 bits (138), Expect = 3.100e-8
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    8 PLYRRAVEIGEAVLGPDHPDLATWLNNLATLVRDRG 43
            PLY RA+ I EAV GPDHPD++TWLNNLA+ ++D G
Sbjct:    3 PLYERALAITEAVYGPDHPDVSTWLNNLASALQDLG 38          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: D8LPW2_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW2_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 5.540e-8
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATL 38
            GK DE +PLY RA+EIGE  LGPDHP LAT LNN A +
Sbjct:   51 GKYDEGDPLYLRAIEIGEKTLGPDHPALATSLNNRARM 88          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: UPI0013D05A06 (tetratricopeptide repeat-containing protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D05A06)

HSP 1 Score: 58.9 bits (141), Expect = 6.150e-8
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATL 38
            GK +EAEPLY+RA++I E VLGPDHP +AT LNNLA L
Sbjct:    5 GKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.170e-7
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATLVR 40
            G   EA+P   RA+EIGE VLGP+HPDLA WLNN A L+R
Sbjct:  644 GNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683          
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.190e-7
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATLVR 40
            GK D+AEPLY RA+ IGE  LGP+HPDLA WLN  A L++
Sbjct:   13 GKYDDAEPLYVRAIAIGEKSLGPEHPDLAVWLNYWAGLLK 52          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58183.13298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLM3_ECTSI1.110e-1167.44Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A7S3NLA4_9STRA3.240e-1165.12Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
UPI0013D295283.400e-971.05tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5L045_9PHAE7.660e-965.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0C4_9PHAE9.580e-975.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0019337E493.100e-866.67tetratricopeptide repeat-containing protein n=1 Ta... [more]
D8LPW2_ECTSI5.540e-868.42TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
UPI0013D05A066.150e-871.05tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A6H5JJK0_9PHAE1.170e-765.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4D0_9PHAE1.190e-765.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..120
e-value: 3.3E-38
score: 133.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..117
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..58
e-value: 1.0E-14
score: 54.6
NoneNo IPR availablePFAMPF13374TPR_10coord: 76..111
e-value: 6.7E-8
score: 32.2
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..113
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 2..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58183contigH-elongata_contig58183:135..1229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58183.13298.1mRNA_H-elongata_contig58183.13298.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58183 135..1229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58183.13298.1 ID=prot_H-elongata_contig58183.13298.1|Name=mRNA_H-elongata_contig58183.13298.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
GKLDEAEPLYRRAVEIGEAVLGPDHPDLATWLNNLATLVRDRGDPAAAEP
LQRRAVSIGERSLGPGHPDQGAQVINLASLLSAQGNADEAESLFRTGIKT
LETAYGPGHPDLAAVLSHFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf