prot_H-elongata_contig5818.13296.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5818.13296.1
Unique Nameprot_H-elongata_contig5818.13296.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length182
Homology
BLAST of mRNA_H-elongata_contig5818.13296.1 vs. uniprot
Match: D7FVY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY1_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.720e-52
Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 0
Query:    2 RNDKVTRCIDERSPVISIVGDNPVYYRQGDSYRELGVKVVDVRDDDSDRTVKIEFSESPGIYFKKVGNITVRYVLANEFLE-EGEISDVRTVVVEDVDECTYDGSRVEFQHACVQEAACLNKIGGYECHCAKGYAGDGLATGTGCMDVEPPVI 153
            R DK+TRC+D+R+P  +I G NP  YRQGDSY ELGV + D  DD+S+R + I++S  PG Y KK G  TVRYVL N  LE +G IS +R V V DVDECTY G   EF+HAC  EA C N  GGYEC CA+GYAGDGL TG GC+DV PP I
Sbjct:  234 RLDKITRCVDKRTPDFTIRGPNPSVYRQGDSYEELGVTIDDRNDDESERKIGIQYSTPPGAYLKKTGEFTVRYVLENRLLEGDGTISKIRKVEVLDVDECTYTGRHAEFRHACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDVTPPTI 386          
BLAST of mRNA_H-elongata_contig5818.13296.1 vs. uniprot
Match: A0A835ZFQ6_9STRA (EGF_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ6_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.870e-27
Identity = 73/194 (37.63%), Postives = 91/194 (46.91%), Query Frame = 0
Query:   14 SPVISIVGDNPVYYRQGDSYRELGVKVVDVRDDDSDRTVKIEFSESPGIYFKKVGNITVRYVL----------ANEFLEEGEISDVRTVVVEDVDECTYDGSRVEFQHACVQ--------------------------------------------EAACLNKIGGYECHCAKGYAGDGLATGTGCMDVEPPVI 153
            S  I + G NP+   QGD+Y ELGV V D  + D DRTVKI++SE  G +FKK G   V Y L          AN   E   ++  R V V D+DECTY+G    F H CV+                                            +A C+N  G YECHC+ GY GDGL+TGTGC+DV  PV+
Sbjct:  592 SAKILVNGQNPLRLHQGDTYSELGVTVNDENEQDGDRTVKIQYSEPFGAFFKKAGKYQVVYSLEVPWLPTGDGANTIGEPATVTAQRDVYVADIDECTYEGPNDYFMHQCVRGHDDLLQQVCSNYIPVVWSLRGFICLLLHAQIRLKVRVLVALVLQATCVNTDGSYECHCSTGYKGDGLSTGTGCVDVMQPVM 785          
BLAST of mRNA_H-elongata_contig5818.13296.1 vs. uniprot
Match: A0A7S4MS12_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MS12_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 6.170e-12
Identity = 52/165 (31.52%), Postives = 77/165 (46.67%), Query Frame = 0
Query:    9 CIDERSPVISIV-----GDNPVYYRQGDSYRELGVKVVDVRDDDSDRTVKIEFSES--PGIYFKKVGNITVRYVLANEFLEEGEISDVRTVVVEDVDECTYDGSRVEFQHACVQ---------EAACLNKIGGYECHCAKGYAGDGLATGTGCMDVEPPVIVSSP 157
            C+DE  PV+ +      GD     RQGD YRE  V++ D   ++  R++KI +S    PG    K G   V Y +A  +     +   RTV++EDVDEC+ D +  E++  C +          A C+N  G Y C C +   GDG     G    E    +++P
Sbjct:  452 CVDESPPVLKLRNDPSDGDGITALRQGDVYREHAVEIADDNAEEYLRSLKITYSRPLPPGC-LAKTGRFYVNYTVATPWTSPPYVRVTRTVIIEDVDECSLDPA--EYESRCPELVPRCDVEAGAQCVNTRGSYSCRCPEYTTGDGFLPMEGAQKDERGRYINTP 613          
BLAST of mRNA_H-elongata_contig5818.13296.1 vs. uniprot
Match: A0A6J5V945_PRUAR (Uncharacterized protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5V945_PRUAR)

HSP 1 Score: 55.5 bits (132), Expect = 9.500e-6
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 0
Query:   95 EDVDECTYDGSRVEFQHACVQEAACLNKIGGYECHCAKGYAGDGLATGTGCM 146
            +D++EC       E ++ CV +A C N +GG EC C KGY GDGL +G GC+
Sbjct:  301 QDINEC-------EIRNLCVSQATCHNNVGGVECRCPKGYIGDGLTSGKGCI 345          
BLAST of mRNA_H-elongata_contig5818.13296.1 vs. uniprot
Match: L8GSC1_ACACA (Calcium binding egf domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSC1_ACACA)

HSP 1 Score: 55.5 bits (132), Expect = 1.020e-5
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   66 KVGNITVRYVLANEFLEEGEISD--VRTVVVEDVDECTYDGSRVEFQHACVQEAACLNKIGGYECHCAKGYAGDGL 139
            +VG   + Y   ++   EG +++   R V V D+DEC         +HAC + A C+N IGGYEC C +G+AGDG 
Sbjct:  204 RVGTYEIEYQATDK---EGNVAEKRYRKVEVTDIDECALG------EHACSENAECINTIGGYECVCKEGFAGDGF 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5818.13296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVY1_ECTSI1.720e-5260.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFQ6_9STRA1.870e-2737.63EGF_3 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S4MS12_9STRA6.170e-1231.52Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A6J5V945_PRUAR9.500e-646.15Uncharacterized protein n=1 Tax=Prunus armeniaca T... [more]
L8GSC1_ACACA1.020e-539.47Calcium binding egf domain containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 96..146
e-value: 1.6E-7
score: 41.0
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 96..135
e-value: 5.5E-8
score: 32.9
NoneNo IPR availableGENE3D2.10.25.10coord: 84..142
e-value: 8.1E-10
score: 40.4
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 94..152
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 96..128
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 119..130
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 96..137
score: 9.466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5818contigH-elongata_contig5818:4565..6465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5818.13296.1mRNA_H-elongata_contig5818.13296.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5818 4493..8097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5818.13296.1 ID=prot_H-elongata_contig5818.13296.1|Name=mRNA_H-elongata_contig5818.13296.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=182bp
MRNDKVTRCIDERSPVISIVGDNPVYYRQGDSYRELGVKVVDVRDDDSDR
TVKIEFSESPGIYFKKVGNITVRYVLANEFLEEGEISDVRTVVVEDVDEC
TYDGSRVEFQHACVQEAACLNKIGGYECHCAKGYAGDGLATGTGCMDVEP
PVIVSSPVRGIKSLGETFTGYAWLIDFSTYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR018097EGF_Ca-bd_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR000742EGF-like_dom