prot_H-elongata_contig5818.13295.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5818.13295.1
Unique Nameprot_H-elongata_contig5818.13295.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length281
Homology
BLAST of mRNA_H-elongata_contig5818.13295.1 vs. uniprot
Match: D7FVY0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVY0_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.420e-60
Identity = 158/377 (41.91%), Postives = 198/377 (52.52%), Query Frame = 0
Query:    1 RSQPIHVDSRSLVDLKAVVYEKEQKVKVDGRGGF--SGGGLRALXXXXXXXXXXGGGSARKDPFAKKNRGVEDRSHRDELERVTESSKKKAAERRLAAKSSLYEKMAKGEVD-SSRAESLVDFSRKTGSDLALLDA--------RREKRGRDRDGTRQDGDDNYEVEDID------------------------------------------GVEVTIVDEFGRDRSVTRGSAVHRVYLEAKRATKEREAQEQAESES--------------YDERYSYRGNKGTAAPAPVG-----------------------------SAGKWAWSSGTGRGADEGDFETREGQDRRANKKMKKLLEEEGGFEKVTEESGAKVR 281
            +S+PI VD RSLVDLKA+VY KEQK K++G GG   + GGLR L          GG  ARKDPFA+ NRGVEDRS RDE+ERVT S+K+KA +R +AAKSSLYEK+AKGE+  ++RA SLVDFSRKTG DLALL+A        R +  G+      + GD                                                   G EV IVDEFGR R+VTRG   HR +L+A++   E E++ +   ++              +D+RYSYRGN G                                     +AG WAWSSG GRGADEGDFETREG++RRA K M +LL  E G  K  +++GAK+R
Sbjct:   15 KSKPIKVDGRSLVDLKAIVYAKEQKAKLEGGGGSGSASGGLRGLRGKRSSGDRDGG--ARKDPFARSNRGVEDRSQRDEIERVTASTKRKAGQRVMAAKSSLYEKLAKGEIGGATRAGSLVDFSRKTGDDLALLEAKAVEPRKLRHKDDGKPGSSASEAGDSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGGEVEIVDEFGRHRTVTRGGREHREHLKARKRAAEIESERREFEQNAXXXXXXXXXXQANFDDRYSYRGNTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDGPTAGGWAWSSGAGRGADEGDFETREGEERRAKKGMAELLGREAGG-KGDDDAGAKIR 388          
BLAST of mRNA_H-elongata_contig5818.13295.1 vs. uniprot
Match: A0A1V9ZLH9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZLH9_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.630e-9
Identity = 60/192 (31.25%), Postives = 93/192 (48.44%), Query Frame = 0
Query:    1 RSQPIHVDSRSLVDLKAVVYEKEQKVKVDGRGGFSGGGLRALXXXXXXXXXXGGGSARKDPFAKKNRGVEDRSHRDELERVT---ESSKKKAAERRLAAKSSLYEKMAKGEVDSSRAESLVDFSRKTGSDLALLDARREKRGRDRDGTRQDGDDNYEVEDIDGVEVTIVDEFGRDRSVTRGSAVHRVYLEAK 189
            +++PI VDS+SLVDLKA+V+ ++++ K          GLR            G  S         N G+E R  RDE +++    E +KKK +   L  K+ +Y++MA+GE  +S  + LV+F+ KT                 RD    +       ED D VE+T  DEFGR + +++ S  ++ YL  K
Sbjct:   15 KAKPIKVDSKSLVDLKAIVFHEQERKKATSEST----GLR---------YKRGARSKASSTKNDVNAGIEKRRQRDEEDKLLGDDEKAKKKRSRHMLIEKAKIYDQMARGERPASSQDLLVNFNTKTNH---------------RDHEFTETSKKQTQEDDDSVEIT--DEFGRTKKISKKSDEYQAYLREK 176          
BLAST of mRNA_H-elongata_contig5818.13295.1 vs. uniprot
Match: A0A8K1C3M6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3M6_PYTOL)

HSP 1 Score: 56.2 bits (134), Expect = 1.750e-5
Identity = 67/219 (30.59%), Postives = 98/219 (44.75%), Query Frame = 0
Query:    1 RSQPIHVDSRSLVDLKAVVYEKEQKVK----------------VDGRGGFSGGGLRALXXXXXXXXXXGGGSARKDPFAKKNRGVEDRSHRDELER---VTESSKKKAAERR----LAAKSSLYEKMAKGEVDSSR----------AESLVDFSRKTGSDLALLDARREKRGRDRDGTRQDGDDNYEVEDIDGVEVTIVDEFGRDRSVTRGSAVHRVYL 186
            +++ I VDS+SL+DLKAVVY+KEQ+ +                  GRG ++   L+A           GG +         NRGV+ R  RDE E+   V + +   A +R+    L  K+ LYE M +G+    R          AESLVDF  K  S +A+ ++    R ++               D+    V I DEFGR R V +GS  +  Y+
Sbjct:   15 KAKEIKVDSKSLLDLKAVVYKKEQERRERQRRLKEALHQEEEEAPGRGKYAR--LKAKKRKGSDEDRLGGTA---------NRGVDKRRKRDESEKELDVDDDADDAALQRKSREMLEKKARLYEAMMQGKTMEDREGNGMSAAAMAESLVDFDEKKRSGMAMKESALWSRSKN---------------DM----VEIADEFGRSRLVEKGSKEYEEYM 203          
BLAST of mRNA_H-elongata_contig5818.13295.1 vs. uniprot
Match: A0A1V9YWT8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWT8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.240e-5
Identity = 56/179 (31.28%), Postives = 87/179 (48.60%), Query Frame = 0
Query:    1 RSQPIHVDSRSLVDLKAVVYEKEQKVKVDGRGGFSGGGLRALXXXXXXXXXXGGGSARKDPFAKKNRGVEDRSHRDE----LERVTESSKKKAAERRLAAKSSLYEKMAKGEVDSSRAESLVDFSRKTGSDLALLDARREKRGRDRDGTRQDGDDNYEVEDIDGVEVTIVDEFGRDRSV 175
            +++ I +DS+SLVDLKA+V+ ++++ K D        GLR+            G  A++    + N G+E R  RDE    L    E +KKK +   L  K+ LY+++A+GE  +S A  L++F  KT        A R+    +      +GDD  E+          VDEFGR + V
Sbjct:   15 KAKAIKIDSKSLVDLKALVFREQERKKAD----IDALGLRSKR----------GARAKESGKKESNAGIEKRRQRDEEAEELLGDDERAKKKRSRAALIEKAKLYDQIARGERPASGAH-LINFDEKT--------AHRDHEFNEAPVLNPEGDDMVEI----------VDEFGRTKRV 160          
BLAST of mRNA_H-elongata_contig5818.13295.1 vs. uniprot
Match: A0A662WGR2_9STRA (Uncharacterized protein n=3 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGR2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.530e-5
Identity = 69/213 (32.39%), Postives = 95/213 (44.60%), Query Frame = 0
Query:    1 RSQPIHVDSRSLVDLKAVVYEKEQK--------VKVDGRGGFSG---GGLRALXXXXXXXXXXGGGSA----RKDPFAKK---NRGVEDRSHRDE----LERVTESSKK---KAAERRLAAKSSLYEKMAKGEVDSSRAES--LVDFSRKTGSDLALLDARREKRGRDRDGTRQDGDDNYEVEDIDGVEVTIVDEFGRDRSVTRGSAVHRVYL 186
            +++PI VD++SLVDLKAVV++K+Q+        +  D  GG SG   G    L          G  S+    R +  A +   NRGVE R+ RDE    LE   E   +   K +   L  K+ LYE+MA+GE  S++A    LVDF  K  S                           E +  + VE+T  DEFGR R V   S  +  +L
Sbjct:   15 KAKPIQVDAKSLVDLKAVVFQKDQERQRRLRDALTADDEGGHSGRRLGKYAHLRGGNKSRKRLGASSSSALSRDEERAGRSFCNRGVEARNRRDEEAQELETPDEDDDRAWHKRSTEMLRKKARLYEEMARGEGASAQASGDFLVDFEAKRSSTAG-----------------------GETKQTELVEIT--DEFGRSRRVATDSEEYTAFL 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5818.13295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVY0_ECTSI1.420e-6041.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9ZLH9_9STRA2.630e-931.25Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A8K1C3M6_PYTOL1.750e-530.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9YWT8_9STRA2.240e-531.28Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A662WGR2_9STRA3.530e-532.39Uncharacterized protein n=3 Tax=Nothophytophthora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15885UNCHARACTERIZEDcoord: 2..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5818contigH-elongata_contig5818:2433..4209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5818.13295.1mRNA_H-elongata_contig5818.13295.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5818 2433..4209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5818.13295.1 ID=prot_H-elongata_contig5818.13295.1|Name=mRNA_H-elongata_contig5818.13295.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp
RSQPIHVDSRSLVDLKAVVYEKEQKVKVDGRGGFSGGGLRALRGKRGKSG
EAGGGSARKDPFAKKNRGVEDRSHRDELERVTESSKKKAAERRLAAKSSL
YEKMAKGEVDSSRAESLVDFSRKTGSDLALLDARREKRGRDRDGTRQDGD
DNYEVEDIDGVEVTIVDEFGRDRSVTRGSAVHRVYLEAKRATKEREAQEQ
AESESYDERYSYRGNKGTAAPAPVGSAGKWAWSSGTGRGADEGDFETREG
QDRRANKKMKKLLEEEGGFEKVTEESGAKVR
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