prot_H-elongata_contig5815.13293.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5815.13293.1
Unique Nameprot_H-elongata_contig5815.13293.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length534
Homology
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: A0A6H5JSN2_9PHAE (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN2_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 6.540e-141
Identity = 291/509 (57.17%), Postives = 339/509 (66.60%), Query Frame = 0
Query:   47 TYGTGANFLTPAQSPS-AENSAR----EDGWT-VPSGKPRFERCDSSGSLTGQQDRRGANTRDTSISTNASGXXXXXXXXXXXNSGFSNNFAMSPISAFDQKLRRKKRSSSFGGSE----TWNETIEGMVAAQRENEKRMATLQREELEQLSEMDMEKKRRHERKXXXXXXXXXXXXXXXRTISNTN-KAVAATAVGVSWLTAGVATGGLLIAGTLVAAGITVTVGSMGAYSRYKK-KNQNGAPSRLRLASDKLEVVQQWRAAILEQVSMLRAQSSLAEEAEPWMGRGFGL----WAARPPEGLPPALKAIDLRLVDDMLSNASWTSRGVMQGLPILEQQV-----LELGSEAGAATEAGVSPGTGWELGGSGRVLKTQTIVRASPLETFVALMGAPKHSMNAVMSGTFTVQSLDDHSDVVRLCLRPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRGEAQLVYTISPRRESLSMPSGHASPECLLCCHVQV 534
            T   G+N  TP  SP+ A N  R    EDG   VP   P  ER DSS SLTGQ + R    R T+  TN  G                 +  +SP      K    KRS+  GG E    T NETI+GMVAAQRENE RMA L+ EEL QLSE +            XXXXXXXXXXX  + + NT  +AVAATAVGVSWLTAG+ TGGL+IAGT+VAAG  VTVGS+GAY++YK  K  +G+P R+R+AS K E V+QWR A+L+Q+  LRAQ     E   W   G GL    W  RP EG PPALKAIDLR+VD +LSN+ W SRGV  GLP+L+Q V     LE GS+     +A   P   W LGGSG VLKTQTIVRASPLETFVALM  P+ S   V+SGT+TVQSLDDHSDVVR+CLRPAWLK+AWASPRDFCLARYWHM+EDGCYI+ LSSM+H  CP+DP FVRGEA LV+TI+PRR+S+  P GHASPEC+L CHVQV
Sbjct:  228 TCSPGSNIATPLDSPTDAGNKGRGYGSEDGLLPVPVVPPSMERVDSSSSLTGQPEVRFRGPRSTT--TNGPGG----------------SVTVSP------KPFPHKRSAGGGGEEGDDTTRNETIQGMVAAQRENETRMARLKLEELGQLSEYER-----------XXXXXXXXXXXDGKGVLNTKGQAVAATAVGVSWLTAGILTGGLVIAGTMVAAG--VTVGSVGAYNKYKSSKKPDGSPGRVRVASFKAETVEQWRQAVLDQLENLRAQPRQDAERSMWAKSGLGLGLPGWFVRP-EGPPPALKAIDLRVVDSLLSNSVWVSRGVTHGLPVLQQHVGAVAGLESGSDNEECAQAVAQPS--WGLGGSGPVLKTQTIVRASPLETFVALMAPPRMSHTTVVSGTYTVQSLDDHSDVVRICLRPAWLKVAWASPRDFCLARYWHMAEDGCYIMVLSSMEHHDCPIDPEFVRGEAHLVFTIAPRRDSV--PGGHASPECMLSCHVQV 694          
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: D7FKP5_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP5_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 5.430e-139
Identity = 287/509 (56.39%), Postives = 331/509 (65.03%), Query Frame = 0
Query:   47 TYGTGANFLTPAQSPS-AENSAR----EDGWT-VPSGKPRFERCDSSGSLTGQQDRRGANTRDTSISTNASGXXXXXXXXXXXNSGFSNNFAMSPISAFDQKLRRKKRSSSFGGSE----TWNETIEGMVAAQRENEKRMATLQREELEQLSEMDMEKKRRHERKXXXXXXXXXXXXXXXRTISNTN-KAVAATAVGVSWLTAGVATGGLLIAGTLVAAGITVTVGSMGAYSRYKK-KNQNGAPSRLRLASDKLEVVQQWRAAILEQVSMLRAQSSLAEEAEPWMGRGFGL----WAARPPEGLPPALKAIDLRLVDDMLSNASWTSRGVMQGLPILEQQV-----LELGSEAGAATEAGVSPGTGWELGGSGRVLKTQTIVRASPLETFVALMGAPKHSMNAVMSGTFTVQSLDDHSDVVRLCLRPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRGEAQLVYTISPRRESLSMPSGHASPECLLCCHVQV 534
            T   G+N  TP  SP+ A N  R    EDG   VP G P  ER +SS SLTGQ D R    R  S +TN  G                 +  +SP      K    KRS+  GG E    T NETIEGMVAAQRENE RMA L+ EEL QLSE + EK+            XXXXXX   + + NT  +AVAATAVGVSWLTAG+ TG         AAG  VTVGS+GAY++YK  K  NG+P R+R+AS K E V+QWR A+L+Q+  LRAQ     E   W   G GL    W  RP EG PPALKAIDLR+VD +LSN+ W SRGV  GLP+L+QQV     LE GS++    +A   P   W LGGSG VLKTQTIVRASPLETFVALMG P+ S   V+SGT+TVQSLDDHSDVVR+CLRPAWLK+AWASPRDFCLARYWHM+EDGCYI+ LSSM+H  CP DP FVRGEA LVYTI+PRR+S+  P GHASPEC+L CHVQV
Sbjct:  129 TSSPGSNIDTPLDSPTDAGNKGRGYGSEDGLLPVPVGPPSMERVNSSSSLTGQPDSRFRRPR--SSTTNGPGG----------------SVTVSP------KPFPHKRSTGGGGEEGDDTTRNETIEGMVAAQRENETRMARLKLEELGQLSEYEREKE------------XXXXXXKDGKGVLNTKGQAVAATAVGVSWLTAGILTGXXXXXXXXXAAG--VTVGSVGAYNKYKSSKKPNGSPGRVRVASFKAETVEQWRQAVLDQLENLRAQPRQDVERSMWTKSGLGLGLPGWCVRP-EGPPPALKAIDLRVVDSLLSNSVWVSRGVTHGLPVLQQQVGAVAGLESGSDSEECAQAVAQPS--WGLGGSGPVLKTQTIVRASPLETFVALMGPPRMSHTTVVSGTYTVQSLDDHSDVVRICLRPAWLKVAWASPRDFCLARYWHMAEDGCYIMALSSMEHHDCPPDPEFVRGEAHLVYTIAPRRDSV--PGGHASPECMLSCHVQV 594          
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: A0A835Z631_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z631_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.340e-17
Identity = 61/166 (36.75%), Postives = 84/166 (50.60%), Query Frame = 0
Query:  400 VLKTQTIVRASPLETFVALM---------------------------GAPKH-------SMNAVMSGTFTVQSLDDHSDVVRLCLRPAWL-KMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDP-AFVRGEAQLVYTISPRRESLSMP-SGHASPECLL 528
            +L+ Q +VRASPLET  AL                            G  +H           V  G   +++LDD++DV+        L  +AWA PR FC+AR+W    DGCY+V + S  H LCP  P  FVRG    ++TI+PRRE+ SMP +G ++PEC+L
Sbjct:  664 MLRCQVLVRASPLETLTALSAAALVXXXXXXXXXXXXXLAGQELSDGGEARHPTLPASAEAGVVALGIRVLETLDDNTDVIEYLAASVRLGPLAWAGPRQFCMARHWREDSDGCYVVCMDSTPHRLCPPPPPGFVRGTMNALFTIAPRREA-SMPLTGISTPECML 828          
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: K3W5F2_GLOUD (START domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5F2_GLOUD)

HSP 1 Score: 89.4 bits (220), Expect = 3.790e-15
Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 0
Query:  402 KTQTIVRASPLETFVALMGAPKHSM-NAVMSGTFTVQSLDDHSDVVRLCLRPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRGEAQLV-YTISPRRESLS 516
            KT  ++  +P E F+ LM    + M +A +     V ++DDHSD++ +  R AW+   W +PRD CL RYW  +EDG Y++ L S  HP CP     +R +     + ISPR   L+
Sbjct:  100 KTMKVIDGTPSEIFLYLMNVKNYPMWDASIEKADVVHTIDDHSDIIHIVYRSAWMWPVWVTPRDLCLLRYWRRAEDGSYVICLQSAIHPECPPTHGIIRAKCDGGGFIISPRGAGLA 216          
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: A0A4D9DBI1_9STRA (START domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBI1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.380e-14
Identity = 59/195 (30.26%), Postives = 88/195 (45.13%), Query Frame = 0
Query:  335 PPALKAIDLRLVDDMLSNASWTSRGVMQGLPILEQQVLELGSEAGAATEAGVSPGTGWELGGSGRVLKTQTIVRASPLETFVALMGA-------------------PKHSMNAVMSGTFTV-QSLDDHSDVVRLCLRP-----------------AWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCP 492
            PP    IDL  +D ++ + +W + GV +GL +LE++    G   GAA                G   K Q +VRASPL+TF+A M                     P+      M+ + TV + LD+H+DV+ L L P                 + L     +PRDFCL RYW + +DG YI+  +S+++  CP
Sbjct:  222 PPPPPEIDLMGIDSLIRSTAWRAVGVQEGLRVLEEERRREGGRKGAA---------------DGPCRKAQVVVRASPLDTFIAFMATDGPSAPPXXXXXXXSSHAHPRAPFMRRMAASLTVVEKLDEHTDVLHLRLHPPSPSLPPXXXXSLRTFLSRLLPRVLAPRDFCLLRYWRLDDDGAYIICQASVENAACP 401          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JSN2_9PHAE6.540e-14157.17START domain-containing protein (Fragment) n=1 Tax... [more]
D7FKP5_ECTSI5.430e-13956.39START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z631_9STRA3.340e-1736.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3W5F2_GLOUD3.790e-1536.75START domain-containing protein n=1 Tax=Globispora... [more]
A0A4D9DBI1_9STRA1.380e-1430.26START domain-containing protein n=1 Tax=Nannochlor... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..201
NoneNo IPR availablePANTHERPTHR12136STEROIDOGENIC ACUTE REGULATORY PROTEIN STARcoord: 167..531
NoneNo IPR availablePANTHERPTHR12136:SF47ENHANCED DISEASE RESISTANCE PROTEIN (DUF1336)coord: 167..531
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 239..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 219..238
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..534
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 244..266
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 389..503
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 391..534
e-value: 4.2E-17
score: 64.6
IPR002913START domainPFAMPF01852STARTcoord: 457..501
e-value: 2.0E-4
score: 20.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5815contigH-elongata_contig5815:775..10122 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5815.13293.1mRNA_H-elongata_contig5815.13293.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5815 775..10122 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5815.13293.1 ID=prot_H-elongata_contig5815.13293.1|Name=mRNA_H-elongata_contig5815.13293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=534bp
MEGRSKEEGEGDADSGRSVHDDDERETEVGGGANPNPISLSTPPPLTYGT
GANFLTPAQSPSAENSAREDGWTVPSGKPRFERCDSSGSLTGQQDRRGAN
TRDTSISTNASGHRNGNRNGNSQNSGFSNNFAMSPISAFDQKLRRKKRSS
SFGGSETWNETIEGMVAAQRENEKRMATLQREELEQLSEMDMEKKRRHER
KKKNRGKDKREDKKDKRTISNTNKAVAATAVGVSWLTAGVATGGLLIAGT
LVAAGITVTVGSMGAYSRYKKKNQNGAPSRLRLASDKLEVVQQWRAAILE
QVSMLRAQSSLAEEAEPWMGRGFGLWAARPPEGLPPALKAIDLRLVDDML
SNASWTSRGVMQGLPILEQQVLELGSEAGAATEAGVSPGTGWELGGSGRV
LKTQTIVRASPLETFVALMGAPKHSMNAVMSGTFTVQSLDDHSDVVRLCL
RPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRG
EAQLVYTISPRRESLSMPSGHASPECLLCCHVQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom