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Homology
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: A0A6H5JSN2_9PHAE (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN2_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 6.540e-141 Identity = 291/509 (57.17%), Postives = 339/509 (66.60%), Query Frame = 1
Query: 139 TYGTGANFLTPAQSPS-AENSAR----EDGWT-VPSGKPRFERCDSSGSLTGQQDRRGANTRDTSISTNASGXXXXXXXXXXXNSGFSNNFAMSPISAFDQKLRRKKRSSSFGGSE----TWNETIEGMVAAQRENEKRMATLQREELEQLSEMDMEKKRRHERKXXXXXXXXXXXXXXXRTISNTN-KAVAATAVGVSWLTAGVATGGLLIAGTLVAAGITVTVGSMGAYSRYKK-KNQNGAPSRLRLASDKLEVVQQWRAAILEQVSMLRAQSSLAEEAEPWMGRGFGL----WAARPPEGLPPALKAIDLRLVDDMLSNASWTSRGVMQGLPILEQQV-----LELGSEAGAATEAGVSPGTGWELGGSGRVLKTQTIVRASPLETFVALMGAPKHSMNAVMSGTFTVQSLDDHSDVVRLCLRPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRGEAQLVYTISPRRESLSMPSGHASPECLLCCHVQV 1602
T G+N TP SP+ A N R EDG VP P ER DSS SLTGQ + R R T+ TN G + +SP K KRS+ GG E T NETI+GMVAAQRENE RMA L+ EEL QLSE + XXXXXXXXXXX + + NT +AVAATAVGVSWLTAG+ TGGL+IAGT+VAAG VTVGS+GAY++YK K +G+P R+R+AS K E V+QWR A+L+Q+ LRAQ E W G GL W RP EG PPALKAIDLR+VD +LSN+ W SRGV GLP+L+Q V LE GS+ +A P W LGGSG VLKTQTIVRASPLETFVALM P+ S V+SGT+TVQSLDDHSDVVR+CLRPAWLK+AWASPRDFCLARYWHM+EDGCYI+ LSSM+H CP+DP FVRGEA LV+TI+PRR+S+ P GHASPEC+L CHVQV
Sbjct: 228 TCSPGSNIATPLDSPTDAGNKGRGYGSEDGLLPVPVVPPSMERVDSSSSLTGQPEVRFRGPRSTT--TNGPGG----------------SVTVSP------KPFPHKRSAGGGGEEGDDTTRNETIQGMVAAQRENETRMARLKLEELGQLSEYER-----------XXXXXXXXXXXDGKGVLNTKGQAVAATAVGVSWLTAGILTGGLVIAGTMVAAG--VTVGSVGAYNKYKSSKKPDGSPGRVRVASFKAETVEQWRQAVLDQLENLRAQPRQDAERSMWAKSGLGLGLPGWFVRP-EGPPPALKAIDLRVVDSLLSNSVWVSRGVTHGLPVLQQHVGAVAGLESGSDNEECAQAVAQPS--WGLGGSGPVLKTQTIVRASPLETFVALMAPPRMSHTTVVSGTYTVQSLDDHSDVVRICLRPAWLKVAWASPRDFCLARYWHMAEDGCYIMVLSSMEHHDCPIDPEFVRGEAHLVFTIAPRRDSV--PGGHASPECMLSCHVQV 694
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: D7FKP5_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP5_ECTSI) HSP 1 Score: 433 bits (1113), Expect = 5.430e-139 Identity = 287/509 (56.39%), Postives = 331/509 (65.03%), Query Frame = 1
Query: 139 TYGTGANFLTPAQSPS-AENSAR----EDGWT-VPSGKPRFERCDSSGSLTGQQDRRGANTRDTSISTNASGXXXXXXXXXXXNSGFSNNFAMSPISAFDQKLRRKKRSSSFGGSE----TWNETIEGMVAAQRENEKRMATLQREELEQLSEMDMEKKRRHERKXXXXXXXXXXXXXXXRTISNTN-KAVAATAVGVSWLTAGVATGGLLIAGTLVAAGITVTVGSMGAYSRYKK-KNQNGAPSRLRLASDKLEVVQQWRAAILEQVSMLRAQSSLAEEAEPWMGRGFGL----WAARPPEGLPPALKAIDLRLVDDMLSNASWTSRGVMQGLPILEQQV-----LELGSEAGAATEAGVSPGTGWELGGSGRVLKTQTIVRASPLETFVALMGAPKHSMNAVMSGTFTVQSLDDHSDVVRLCLRPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRGEAQLVYTISPRRESLSMPSGHASPECLLCCHVQV 1602
T G+N TP SP+ A N R EDG VP G P ER +SS SLTGQ D R R S +TN G + +SP K KRS+ GG E T NETIEGMVAAQRENE RMA L+ EEL QLSE + EK+ XXXXXX + + NT +AVAATAVGVSWLTAG+ TG AAG VTVGS+GAY++YK K NG+P R+R+AS K E V+QWR A+L+Q+ LRAQ E W G GL W RP EG PPALKAIDLR+VD +LSN+ W SRGV GLP+L+QQV LE GS++ +A P W LGGSG VLKTQTIVRASPLETFVALMG P+ S V+SGT+TVQSLDDHSDVVR+CLRPAWLK+AWASPRDFCLARYWHM+EDGCYI+ LSSM+H CP DP FVRGEA LVYTI+PRR+S+ P GHASPEC+L CHVQV
Sbjct: 129 TSSPGSNIDTPLDSPTDAGNKGRGYGSEDGLLPVPVGPPSMERVNSSSSLTGQPDSRFRRPR--SSTTNGPGG----------------SVTVSP------KPFPHKRSTGGGGEEGDDTTRNETIEGMVAAQRENETRMARLKLEELGQLSEYEREKE------------XXXXXXKDGKGVLNTKGQAVAATAVGVSWLTAGILTGXXXXXXXXXAAG--VTVGSVGAYNKYKSSKKPNGSPGRVRVASFKAETVEQWRQAVLDQLENLRAQPRQDVERSMWTKSGLGLGLPGWCVRP-EGPPPALKAIDLRVVDSLLSNSVWVSRGVTHGLPVLQQQVGAVAGLESGSDSEECAQAVAQPS--WGLGGSGPVLKTQTIVRASPLETFVALMGPPRMSHTTVVSGTYTVQSLDDHSDVVRICLRPAWLKVAWASPRDFCLARYWHMAEDGCYIMALSSMEHHDCPPDPEFVRGEAHLVYTIAPRRDSV--PGGHASPECMLSCHVQV 594
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: A0A835Z631_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z631_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.340e-17 Identity = 61/166 (36.75%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 1198 VLKTQTIVRASPLETFVALM---------------------------GAPKH-------SMNAVMSGTFTVQSLDDHSDVVRLCLRPAWL-KMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDP-AFVRGEAQLVYTISPRRESLSMP-SGHASPECLL 1584
+L+ Q +VRASPLET AL G +H V G +++LDD++DV+ L +AWA PR FC+AR+W DGCY+V + S H LCP P FVRG ++TI+PRRE+ SMP +G ++PEC+L
Sbjct: 664 MLRCQVLVRASPLETLTALSAAALVXXXXXXXXXXXXXLAGQELSDGGEARHPTLPASAEAGVVALGIRVLETLDDNTDVIEYLAASVRLGPLAWAGPRQFCMARHWREDSDGCYVVCMDSTPHRLCPPPPPGFVRGTMNALFTIAPRREA-SMPLTGISTPECML 828
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: K3W5F2_GLOUD (START domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5F2_GLOUD) HSP 1 Score: 89.4 bits (220), Expect = 3.790e-15 Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 1
Query: 1204 KTQTIVRASPLETFVALMGAPKHSM-NAVMSGTFTVQSLDDHSDVVRLCLRPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRGEAQLV-YTISPRRESLS 1548
KT ++ +P E F+ LM + M +A + V ++DDHSD++ + R AW+ W +PRD CL RYW +EDG Y++ L S HP CP +R + + ISPR L+
Sbjct: 100 KTMKVIDGTPSEIFLYLMNVKNYPMWDASIEKADVVHTIDDHSDIIHIVYRSAWMWPVWVTPRDLCLLRYWRRAEDGSYVICLQSAIHPECPPTHGIIRAKCDGGGFIISPRGAGLA 216
BLAST of mRNA_H-elongata_contig5815.13293.1 vs. uniprot
Match: A0A4D9DBI1_9STRA (START domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBI1_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.380e-14 Identity = 59/195 (30.26%), Postives = 88/195 (45.13%), Query Frame = 1
Query: 1003 PPALKAIDLRLVDDMLSNASWTSRGVMQGLPILEQQVLELGSEAGAATEAGVSPGTGWELGGSGRVLKTQTIVRASPLETFVALMGA-------------------PKHSMNAVMSGTFTV-QSLDDHSDVVRLCLRP-----------------AWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCP 1476
PP IDL +D ++ + +W + GV +GL +LE++ G GAA G K Q +VRASPL+TF+A M P+ M+ + TV + LD+H+DV+ L L P + L +PRDFCL RYW + +DG YI+ +S+++ CP
Sbjct: 222 PPPPPEIDLMGIDSLIRSTAWRAVGVQEGLRVLEEERRREGGRKGAA---------------DGPCRKAQVVVRASPLDTFIAFMATDGPSAPPXXXXXXXSSHAHPRAPFMRRMAASLTVVEKLDEHTDVLHLRLHPPSPSLPPXXXXSLRTFLSRLLPRVLAPRDFCLLRYWRLDDDGAYIICQASVENAACP 401
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 441.0 |
| Seed ortholog evalue | 7.7e-121 |
| Seed eggNOG ortholog | 2880.D7FKP5 |
| GOs | GO:0001101,GO:0002831,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005789,GO:0005886,GO:0008150,GO:0008289,GO:0009719,GO:0009723,GO:0009725,GO:0009751,GO:0010008,GO:0010033,GO:0012505,GO:0014070,GO:0016020,GO:0031090,GO:0031347,GO:0031410,GO:0031982,GO:0031984,GO:0032101,GO:0035091,GO:0042175,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046677,GO:0048519,GO:0048583,GO:0048831,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0070273,GO:0071944,GO:0080134,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:1900055,GO:1900056,GO:1900150,GO:1901700,GO:1901981,GO:1905622,GO:2000024,GO:2000026 |
| EggNOG free text desc. | Protein ENHANCED DISEASE RESISTANCE |
| EggNOG OGs | 2CMUG@1,2QS0N@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| Model size | 1602 |
| Cds size | 1602 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930943.4000168-CDS-H-elongata_contig5815:774..878 | 1622930943.4000168-CDS-H-elongata_contig5815:774..878 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 775..878 - |
| 1691679634.6725903-CDS-H-elongata_contig5815:774..878 | 1691679634.6725903-CDS-H-elongata_contig5815:774..878 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 775..878 - |
| 1622930943.4169817-CDS-H-elongata_contig5815:1688..1780 | 1622930943.4169817-CDS-H-elongata_contig5815:1688..1780 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 1689..1780 - |
| 1691679634.6848302-CDS-H-elongata_contig5815:1688..1780 | 1691679634.6848302-CDS-H-elongata_contig5815:1688..1780 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 1689..1780 - |
| 1622930943.434618-CDS-H-elongata_contig5815:2337..2525 | 1622930943.434618-CDS-H-elongata_contig5815:2337..2525 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 2338..2525 - |
| 1691679634.7088048-CDS-H-elongata_contig5815:2337..2525 | 1691679634.7088048-CDS-H-elongata_contig5815:2337..2525 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 2338..2525 - |
| 1622930943.4483478-CDS-H-elongata_contig5815:2955..3108 | 1622930943.4483478-CDS-H-elongata_contig5815:2955..3108 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 2956..3108 - |
| 1691679634.7179606-CDS-H-elongata_contig5815:2955..3108 | 1691679634.7179606-CDS-H-elongata_contig5815:2955..3108 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 2956..3108 - |
| 1622930943.4664202-CDS-H-elongata_contig5815:3784..3988 | 1622930943.4664202-CDS-H-elongata_contig5815:3784..3988 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 3785..3988 - |
| 1691679634.7300138-CDS-H-elongata_contig5815:3784..3988 | 1691679634.7300138-CDS-H-elongata_contig5815:3784..3988 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 3785..3988 - |
| 1622930943.4781773-CDS-H-elongata_contig5815:4693..4761 | 1622930943.4781773-CDS-H-elongata_contig5815:4693..4761 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 4694..4761 - |
| 1691679634.7390769-CDS-H-elongata_contig5815:4693..4761 | 1691679634.7390769-CDS-H-elongata_contig5815:4693..4761 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 4694..4761 - |
| 1622930943.4942067-CDS-H-elongata_contig5815:5653..5888 | 1622930943.4942067-CDS-H-elongata_contig5815:5653..5888 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 5654..5888 - |
| 1691679634.7496688-CDS-H-elongata_contig5815:5653..5888 | 1691679634.7496688-CDS-H-elongata_contig5815:5653..5888 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 5654..5888 - |
| 1622930943.5094323-CDS-H-elongata_contig5815:6583..6673 | 1622930943.5094323-CDS-H-elongata_contig5815:6583..6673 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 6584..6673 - |
| 1691679634.7591574-CDS-H-elongata_contig5815:6583..6673 | 1691679634.7591574-CDS-H-elongata_contig5815:6583..6673 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 6584..6673 - |
| 1622930943.524871-CDS-H-elongata_contig5815:7984..8177 | 1622930943.524871-CDS-H-elongata_contig5815:7984..8177 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 7985..8177 - |
| 1691679634.7697847-CDS-H-elongata_contig5815:7984..8177 | 1691679634.7697847-CDS-H-elongata_contig5815:7984..8177 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 7985..8177 - |
| 1622930943.5408154-CDS-H-elongata_contig5815:9208..9433 | 1622930943.5408154-CDS-H-elongata_contig5815:9208..9433 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 9209..9433 - |
| 1691679634.7803874-CDS-H-elongata_contig5815:9208..9433 | 1691679634.7803874-CDS-H-elongata_contig5815:9208..9433 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 9209..9433 - |
| 1622930943.5531826-CDS-H-elongata_contig5815:10072..10122 | 1622930943.5531826-CDS-H-elongata_contig5815:10072..10122 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 10073..10122 - |
| 1691679634.7928944-CDS-H-elongata_contig5815:10072..10122 | 1691679634.7928944-CDS-H-elongata_contig5815:10072..10122 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig5815 10073..10122 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5815.13293.1 >prot_H-elongata_contig5815.13293.1 ID=prot_H-elongata_contig5815.13293.1|Name=mRNA_H-elongata_contig5815.13293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=534bp
MEGRSKEEGEGDADSGRSVHDDDERETEVGGGANPNPISLSTPPPLTYGT GANFLTPAQSPSAENSAREDGWTVPSGKPRFERCDSSGSLTGQQDRRGAN TRDTSISTNASGHRNGNRNGNSQNSGFSNNFAMSPISAFDQKLRRKKRSS SFGGSETWNETIEGMVAAQRENEKRMATLQREELEQLSEMDMEKKRRHER KKKNRGKDKREDKKDKRTISNTNKAVAATAVGVSWLTAGVATGGLLIAGT LVAAGITVTVGSMGAYSRYKKKNQNGAPSRLRLASDKLEVVQQWRAAILE QVSMLRAQSSLAEEAEPWMGRGFGLWAARPPEGLPPALKAIDLRLVDDML SNASWTSRGVMQGLPILEQQVLELGSEAGAATEAGVSPGTGWELGGSGRV LKTQTIVRASPLETFVALMGAPKHSMNAVMSGTFTVQSLDDHSDVVRLCL RPAWLKMAWASPRDFCLARYWHMSEDGCYIVTLSSMKHPLCPMDPAFVRG EAQLVYTISPRRESLSMPSGHASPECLLCCHVQV back to topmRNA from alignment at H-elongata_contig5815:775..10122- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig5815.13293.1 ID=mRNA_H-elongata_contig5815.13293.1|Name=mRNA_H-elongata_contig5815.13293.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9348bp|location=Sequence derived from alignment at H-elongata_contig5815:775..10122- (Himanthalia elongata Himel1 dioecious) ATGGAGGGGCGGTCCAAGGAAGAAGGGGAAGGGGATGCTGACAGCGGGAG
GTGACGTATGGCAGAATAACGTATCGAGTGTGGGGGGATGGGCTGAAACG
GTAGTCTTGACGGTCGATTGATTGGTCGGTCCGTCTTTCGGTCGATTGGT
GGCCGAGCGGTCTGTTCGGCGGACTGGTGTCGACCAATCGATCTCGATCT
CGATCTGGTATCGGCTTCATTTTTGTCGCAACAACGGTACGATCTCGACC
AATCGATCTCGATCTGGTAGCCGTAGCACATTTGACTCTAATGAAGTAGA
GTACAGTACAGTACCTGGTACACTATTTTAATACTGTACAGTAGTGTAGA
GTAAAAGGCGGGCGACCTTTGCCCTTGCTGGTAGCTTCTCATCTCCTTTC
GTCTCTTCTCATCGCTCCTACGAATAGGAAAATGGCTTGTGTGTGTGTAT
GTGTGTGTGTGTGTATGTATTTGTGTGTTTCCCTTCACTGTATTCCTTAA
GGCATTCGGTGTCAGCGGGAGAAGAGAGAGACGCTGTCGAAATTTACCCT
AGATGCTCTACCCCCCCTTCCCCTCCCCATACTAACGTATATGTCCATAC
TAATGTCATGTCATTTCCCCTTTCCCCGTGGCGGCAAGGCGATCTCCTCT
AAACCGCGACACCGATACCAATACGTACTTTGCCAACAGGTCTGTTCACG
ACGATGACGAGCGCGAAACAGAGGTTGGCGGGGGCGCGAATCCAAACCCC
ATCTCCTTGTCAACACCACCTCCGCTGACGTATGGGACGGGGGCGAATTT
TCTGACGCCAGCGCAGTCTCCCTCTGCGGAAAACTCGGCCAGAGAGGACG
GATGGACGGTACCGTCGGGAAAGCCTCGCTTCGAACGATGTGACAGCTCC
GGGTCGTTGACGGGGTGAGCGAGGAACCGCGACCGGCCAAACGTTATCTG
TCTCCTGTTGGAGGATGTAATGTGCCGTAACTGTTTATATGCCCTGTGCT
TGCGTCATGTTTTAGGAGTTTTAGATATAGAAAGGCGTTTGGTGGGTTTA
CAGGGTTCCGTGGTGTATAGTATTGTAGGAAAGTGGACCAATTAGAAAGG
TTGGGGGGGGGTATGTTCAAGGTTGGGATTCGCGGGATATACTATTAATA
GTCATAGTCCGGTTGTTATGATAGCACGTCTCTTAGAAGAGTGAGGCCTT
ATGAATAGCAAGTCACGTTTAGTGTTTGCGAGTGGGCTCTGGTTTCTGTC
GACAACCGCGCTGTTTCACTTAGGGGGGGAGGTTTAATGTTCCTTCCGTA
ATGTGCCAACAACATGCGCTAAGTCTCCTCTTTCCCACTGAAGTGGACCC
CCCAAAAAACATGCCTTCCCCTGTTCTGTAGATGGAGATATTTTGATGTG
CTTCTTCGTTAGCAACGAGATATGGAAGATATGAGCTAAGGCCGGGTCTT
ATCAGAGCACAAAAATTTTAATTTCCAGCCGATTTAAATTTAAATCGGGC
TTTGATTGGTCGAAAGCAAATAACGCCAAGCCTTTGTCCAATCAGAGACC
GATTTAAATTTAAATAGACTGAGACCCCCCTTTATAGTAATCCGTGCTTG
CCTCAATGTACCACCTATCACTATTACTATATCTCTATATATTAATAGTG
GTATTTGATTATCTCATGTGACTGTCATTTTCGATAACTTACTATATATA
TTATATACTATGTTATACTATACTAGACTGTACTGAACTATACTGTACTG
TAATATACTGTACTGTACTGTTGGTCCGATTTATTTTTTGCTTTTACTTT
TTTTGCTTTTTTTTCTCGTTATGTTCGTTCTAATAGATCAACCGAAATAT
CCTCAGACTGTTGATTTTTTTATGTACAGTGTGAACTTATACTAATAATA
CATATTTATGTAATGGGCGGTCCAAACACGGGGGGTTCTGCTCAGGCAAC
AAGATCGTCGCGGTGCAAACACGAGGGATACTAGTATTAGTACGAACGCA
AGCGGCCATCGGAACGGCAACAGGAACGGCAACAGCCAGAATAGCGGCTT
TTCGAATAATTTCGCGATGTCTCCAATTAGCGCCTTCGACCAGAAGCTCC
GACGGAAGAAGCGATCCTCGAGCTTCGGAGGCAGTGAGGTGAGACTTAGT
CCGAAACAGATGGAGTTCCAAATCGAAGCGTTTCTTTTGCAGCCTTGCCG
TTGTTTGTTTGCTTGAGGGGAGAGAGAGAGAGACAGAACGTCTCCTCATC
TTCTCTCACGTCTTTTCTTTTCTCTTTTCTTTTCAACGACTTTACAATGA
AATCCCTTATCTGAGTTTATTTTTTCTATACTTTGGTGTACACAGTACTG
TACTACACTATTACTTTCGTTCTCCATCCCCCCTCCCCTCCCCTCCCCTC
ACTTCCCCTGCTGCTTCTGCTTCTGCTGCGAAAGTAGGGGAAATAATGTA
GTAATGCTAAGTGCATGCCGCATCCTAAGTGCTAACGGGCGTAGATCATT
CCACCATCCCACCAATTATAATGCCGGGATGGAGCGATAGGCCGGGTTTT
ATCTGGCCAGGCTGCGTTTTACAAGGATGGTGCTAGCAATTAGTCCTAAT
CCTTGCGTTTGCTACCCCCAAACGGAATATGCCATTTTAATTGGAAACAC
CGGGTAACCAAATTTTGTGCATTCAACGGGCGTTATCGACTATGCTATAG
TATATATTATACTGCGCTCCAAGTTCGGCAAACGGACTTTAAAGTCATTA
AAGTCATTACGACATACACAACGGTATACGATAATTGTAGTGCTATGCTA
TGATTATAGTGCTACTCTCAAAACTTAAATCTGCTCATGAGTACTCATGG
CGGAGTATTCTTATAAGTCTAAGGTTGCTCTATGGCTTTCGAACAATCTT
TTGTTCAGCAAGCATCCTCTATAATGTTATGCGTTTCACCCTTTTGGAAC
CTTTGGGAGAGAGAGGGAGAGGCAACAACAAAAGCAACAAACACTCTTAA
AGCGAGGTCTCTTGAGCTTACATTGCACCCACCCTGCATGAAGAACTAAC
TAACTCCATTAACAGTTTCATGCCACAAGACGGAGGGGGGGTAGGGGGCC
ATTTATTTCCAGCATGGCACACGGTCTAGGGTAAGGCAACGTGACCTACA
CTTCTACAGCGTGTGACGTAGCATGTGGACTTTTAACGCGCCAATTCCCA
AATTGAATGACTCAGACAACTCAAGCGTGACCCAGCGATGCCGTCTCTAA
ACGTTTCAGGCTATGTTATGCTATGTTTTTTTCTAGTGTGTAGTGAAGCG
TGGCGTAGCTCCACCGGACGCCCCCTGTCGTACCTCTATCTCAGCCCCCC
TTGTAGTGACGTCGGATTTTACTGGAACCCAGCGTAACGCCTCTCGTCCA
ACGTGGAACTCTTTGGGCCCTCGTACCATGTGGGCATGATTGCGGGCAGA
CCTGGAACGAGACGATCGAGGGCATGGTGGCAGCGCAGAGAGAGAACGAA
AAGAGAATGGCCACGTTGCAGAGGGAGGAGCTAGAGCAGGTACCGGTAGA
TTTTAATGCAGTAGCATCCATTCGGTACTGGAGTATTATACTTGTATTAA
TACTAATAATACTAATAAAAGCATCGGCAGGAAGGAGGTTAGATGCATCA
ATGCTCACAGGACCAAGAGAAACAAACGGGGCGAAAGAGGATCGGAACGA
CGTTGTTGCTCGGGCGAGAGAGGATCTCCGGAAATAAGCGCGATGCTACG
TACTAGAAGGACAGAACAATTTTCGTTGTTTTTGGCGAGAACTCCCTGCC
CCCATAGACATTTTTCAGGGTTTTCGGGGGGGTTTTCGTTTTTCTTCTTT
TTTTCTAAAGCGCAGAAAAAAATCGCCTCGTCTTGATGAATTTTGTTTGT
CGGATCATAGGGTAAAAGTCCTTTGGAAGTCTTTTCATATTTCATGTGGG
AATTTGCCTGTTATTTTTAATGGGGATTATGCTTTTTGCTTTTTATTTGA
TTGGACCGCTCTTTGACCAAGCTCTTCATCGGATAGGATGAGATCAAATC
ACATTGCGCTCGACCATTTCGACAATTCGGAGACGGTCCATATTATATAC
TATATATATATATATCCTCCCTCACGACCAAGTCCGCCATTCCTCCTGTC
TCCCCGCCCTACCCCTTAAACCTGACGCCACTCCTATGGAATCGGATCGG
ATCGGATCGGATCATCTTCCGTGTGGGAACACAGCTGTCCGAAATGGATA
TGGAAAAGAAGCGCCGGCACGAAAGGAAGAAGAAAAACAGGGGGAAAGAT
AAGAGGGAGGACAAGAAAGACAAGAGAACTATCAGCAATACGAACAAAGC
CGTCGCGGCAACGGCTGTAGGGGTGTCTTGGCTCACTGCCGGGGTGGCCA
CGGGCGGCCTTTTGATCGCCGGGACACTTGTGGCCGCCGGCATCACCGTC
ACCGTGGGGTCCATGGGAGGTGAGGGGTTTCATAAAAAGCGCGTGGCCCT
GCGGGTTCGGAGTGGGATGGGGTTGGATAGTGTAGGTAGACTTGTTAGTA
GAAACCGTGTGTACCATGAGTCGTTGTGATGGGGTTCGGAAGGTGAGTAG
GTGGGGGTATTTTGGTAGACCGTAAAATAAAGGTCACCTTGGGTCCGTGT
AGGTTGATTGGTTCTCCTGAAAAGGATTTTGGTTCTGCCGGTCTACCATG
ATACGTAGATTATAACACACCATTCCACGGAATGATGTTTCGGCTATTTC
GATATTATATATGCATAATATACTACCAAGGTATGGGGGGAGGGTCTCAG
TAGACCTGGCTATGTCTCGCTGCTTGAAATATAGTTTTCCGGAAGCTTAG
CTCGAGGCGTTTTCGGTATATACTGTAGAGCTAATCGAGTTCGTCCTAGA
AGTAGAGAAACAAAATGGTTCAAGACCTCCGCGGCGTCGGGAGAAACCAT
CCGTGGTTGATGCTTCACTTCGACCGCGAGGACCATCTCGGCATGGAACT
GTGAACACACCATGTATACCTGAGTAGCTAGGATATATTTTTCGCTATCT
CCCAGAATGCCAATAGCCTCACTTCCTTTTCCCCCTCCGCGAAGCCGAGA
ATTCGTGGTGGAAAACCATCTGTCTGATCATCTCCCCTCTATCTCTCTCT
CTCTCTTATCGTGGTTGATTTGTTTCATGGATGTATCAATGTGATCTCCC
AGAATGCAAATAACCCCCACCCCCTTTTCCCCCCTCCGGGAAGCCAAGCA
TTCGTCGTGAGAAGCCCTATCCTTGATCCTCTCCCCTCTCTCTCTATTAT
CGTGGTTGATTTGTTTTTATGGGTGTACCGACGTATGTTGATGGCGGCGT
TTGTTTCCCAGCTTATAGCAGGTACAAAAAAAAGAACCAGAACGGTGCTC
CCAGTCGGCTACGTCTCGCCAGCGACAAGGTGCTCTTGTGCACCGTTACT
GATACACTCACTACCGTATGAATTATACTACATGAAGTACTAGTTAGGTG
TTTGTCGGTAATTTTGGCCACTCGGTAAGTTTACATGCTGTATGAAGTTT
ACTGCCAAGGCGATTAGCTTCTTGGCCGTCTGCTAGGGGACGAAATTTAT
ATACTGTACTATATATATATATATATATGAATTTGAACTTGGTATATCGT
GAGGGGTGCCGTGAACCGTCTACGCCACTCCCAAAGTATCGAAGGCGTTT
TTCAAGGCGAGAGGTCGCGGATGGGAGCCTAGAAAGCTCGGGCGGTCCGC
AGTTTCGGCCTGCACTATGTACTTGTAACTGTTTCTGTAACTGTTTGTCC
AGTTATCGGGATTTTATTGGCTTGACTCTGTGTCGGACACACAAATTACA
AATTACTAGGCGAAGAAGGACGAACTATTTTAGAGGAGAGGAGAGGGGGG
AGGGGGGCAAAAACCAGTTGTCGCCTTTCTTTCTATCTCTCTATGAAACC
TACGCGCTGTGCAGACGTGCATGTTCATGTTCCCCTTCCTCCTCCCTCCC
TCCTCCTCCCTCCCTCCGTCCCCCGTTTGGTGCTGTTTGGTGCTGTTTTT
GTTCACCTTTACGTCCTCTTTATGCATTTATGCTTTGATGTCTGGACGAT
GGCAAAACACTGTCGAGTCGATTTATGAGTGCAGCTGGAAGTTGTTCAGC
AGTGGCGAGCCGCCATTCTAGAGCAAGTGTCAATGCTTCGAGCGCAGTCC
TCTCTAGCCGAGGAGGCCGAACCGTGGATGGGCAGGGGCTTTGGGCTATG
GGCGGCGCGTCCCCCCGAGGGACTCCCCCCCGCCCTTAAGGCGATAGATT
TGAGACTTGTGGACGACATGCTGAGCAACGCTTCGTGGGTGAGCCGTGAT
CTAAAACATACCAAAAATATACATTTATACTGTATACTATATGCCATATA
AAAATAAAATTGGGCACAAGAACGTGAGCATGGAAATTGGGCCATTTTGG
GTCGTTCCGTTCGTTTTGTCTTTTTGTGTGATTTTAGTAGCGGGTACGCG
CTTAAAAACGAAATAAATAACCAACTTTAAATATTATACCTAAAATAGAC
AGGCAATCAGACAGAATGGGAAAACGAGGGATCCAGCGCTCAAAATGAAA
GATTCCGAGTTGTCTGAGTACAGAGCAAAAAGTGGTTTGATTCGGTCTCG
TCTGGTAGTTACACGCCGTTTGCCGTCTATTGTCACGAGCAAGCCTCGGA
GGTTGGTTCGACTGACTCCACTTGCCCCACGTCTGCTGAAAAGAGTTAAA
AAAAGGTTACATGCTGCATAATATCGGTGAGGCATGGGGTCGTTTTCCCT
CTGTAGACGTGATTTTTTGTTGTTTTTTTCTGATATTTCGGTGAAAACCA
AAACTCGAGGCCAAAGCCAAGGCCAAGAGTGTGCAAGGGGTAAAACCCTT
TCAGTCGCCGCTCTTCGGGGCGTTTTTTTTGCGGGGAGGGGGGCGTTAAC
TCCTGCTTTCCCCCTCCTAACCAAATATTTTAATTCGACTGGTCGTCCCA
ATATTTTATCTTAGACTTCGCGAGGTGTGATGCAGGGCTTGCCGATATTA
GAGCAACAAGTGCTGGAGCTTGGTAGTGAGGCTGGCGCTGCGACTGAAGC
TGGGGTTTCGCCAGGCACCGGGTGGGAGCTCGGCGGGTCGGGGCGTGTTC
TCAAGACGCAGACTATCGTGAGTTATATTCTGTATAAGTGTGTTGAAGCG
TTTTTACGGGGGGGGGGGGTGGCGGAGAGGGGATGGGAGGTAAAAAAATA
GATAATAATAACTTGCCCGCGTGTTGGAAATATAAAAACTGACAGGGTAT
TTGTCCTTACCTCCCAACTTTAGGAAAACTTTAGGGGAGTAGCTCTGGAA
ATAGGAACATCAATGCAATAAGCGCAATTTATATATGAGTGTATTTATAA
AAAACATGCCACCAGCATCTGCAGTAACATTCAATCGTTCTTCCGTGTGG
GTACATTCGTAAAAAGTAAGCAATTTGTAAAAAGTACCCAAGCGAGGTTA
CAGTGTTGACTTACCGATCGCCTTTCTCCACTCCCCCCTCGTTCGTTTGT
TCGTTTGTTCGTTCGTTCGGGGCGCTCATCGATGTGCCATGTGCAAGGTT
CGGGCCAGTCCCTTGGAAACGTTCGTGGCGCTCATGGGAGCCCCGAAGCA
CTCGATGAACGCGGTGATGAGCGGCACATTCACGGTACAGTCTCTGGACG
ACCACTCCGACGTGGTCCGGCTGTGCCTCCGTCCGGCGTGGCTGAAGATG
GCGTGGGCCTCCCCGAGGGACTTTTGTCTAGCCAGGTGCGGGTTGTGGTT
GCGTCGCTGTTCGCTGTTCGTTCGTCCTTCTACTCTAAATATATAGTATT
ACTATTGTTCGACTGAGGTTGGTTTTTCTTTTACTACGTAGGTACGATGA
TTTAGAGCTACCAACTATCAAAATAGTCATTCATATAGGTGTAGATCGAG
ATGTTATACAGTAATATAGCGATCTCAGTATATACAAAAATATCAAAATT
AAATCAGTGCGGGTGTTTTTGGGGGCAGTGCTTTCAACCAAGGTGAGATC
CTTGATGCATATTAATAGTAAGTTGAAAGCTATGGAGGATGCGATAGGGA
GTTCTATGTTAAGGCGTTTTCTTTGCACATGTCTCCTTTGAACCGTCAAA
ACGTTTTCTCTCATTTATAAAGACAGAAATATATTTTCGCAGAGTAGCAG
TCTGTCGTTGTTACCTTGTTTGAAAAACGATTGTCCGGTAATCAACAGTC
ACGTCGGTTGGGGACGAAACTCGTCCAGCCTCTCGTCCCACCCCACACAC
GCCTCCATTTTTACCTTAAACTTCATAAAACCCTTGATACAGGTACTGGC
ACATGTCGGAAGACGGATGCTACATCGTCACCCTCTCGAGCATGAAGCAC
CCTCTTTGCCCCATGGATCCCGCGTTCGTCAGGGGTAAGAGAGACTCCAT
CAGCCCACTCTTTTCCCCCTTCTCTCATCAAGAATCGATGTCGCCTTCTC
TTGGGGTAGGGAGGAAAGGTCGTGTCTGGAGAACAGAGCACGTCTTGTTC
CCTGCAGTCGCTACAGTACTACAAACCGGTATATATTTTAAGTATATCTA
TAAGTATCGGGTATATAGTTTAAATTGTACCAGGTACCTTTTTACTATAG
TGTACTTTAGTGTTTACATTCTTATTTGTTAATGTTAGTGTACTTTAGTG
TGGGTGTTACTATAGTGTACAACTTATGGCGGTGTGGTGCAGCCCACCAG
GCACCAGTAGATATGTTGGATGTGTGAAATATATTGGCAGCGACACCAAA
AGCAGCCAAAGCAAGCTTGTCTTTTTCCTTGTCCTTCCTCAGATTACTTC
ATTGCTACATTACTTCGTACATTATTACTGTTACATTACTGTATAACTCT
ATTGCTATATTATTTTATTACTTTATTGCTAGATTACTGTTACATTACTG
TATCATTTCATTGCTATATTACGGTAGTCAACCCCCTCCACGGTCACGGT
CACGGCAGTAAATGATCAATGATAGGCGATAGCATAGTAGTAGCACACGC
TCTCACACTCTTACACAAGGCCGCGGCTGTAAAATGTTGTTTTTGGTCCA
CAAGCGTTTTGGTTATTACCCCTCTTCTCGAGCCTCGAGGAGAAGACATG
TTTTTTTAGTGTACAAGTGTGCTAATAACCCTCCGTCCCTTGCTGCCCCT
CCCTGGCCACTGCACGATACGCCGCGTCGATGGCACACACCAAGGCGAGG
CCCAGCTGGTGTACACGATCTCCCCTCGGAGGGAGTCCCTCTCGATGCCG
AGTGGGCATGCGTCTCCCGAGTGCTTGCTATGTTGTCACGTTCAGGTT back to topCoding sequence (CDS) from alignment at H-elongata_contig5815:775..10122- >mRNA_H-elongata_contig5815.13293.1 ID=mRNA_H-elongata_contig5815.13293.1|Name=mRNA_H-elongata_contig5815.13293.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3204bp|location=Sequence derived from alignment at H-elongata_contig5815:775..10122- (Himanthalia elongata Himel1 dioecious) ATGGAGGGGCGGTCCAAGGAAGAAGGGGAAGGGGATGCTGACAGCGGGAG ATGGAGGGGCGGTCCAAGGAAGAAGGGGAAGGGGATGCTGACAGCGGGAG GTCTGTTCACGACGATGACGAGCGCGAAACAGAGGTTGGCGGGGGCGCGA ATCCAAACCCCATCTCCTTGTCAACACCACCTCCGCTGACGTATGGGACG GGGGCGAATTTTCTGACGCCAGCGCAGTCTCCCTCTGCGGAAAACTCGGC CAGAGAGGACGGATGGACGGTACCGTCGGGAAAGCCTCGCTTCGAACGAT GTGACAGCTCCGGGTCGTTGACGGGGTCTGTTCACGACGATGACGAGCGC GAAACAGAGGTTGGCGGGGGCGCGAATCCAAACCCCATCTCCTTGTCAAC ACCACCTCCGCTGACGTATGGGACGGGGGCGAATTTTCTGACGCCAGCGC AGTCTCCCTCTGCGGAAAACTCGGCCAGAGAGGACGGATGGACGGTACCG TCGGGAAAGCCTCGCTTCGAACGATGTGACAGCTCCGGGTCGTTGACGGG GCAACAAGATCGTCGCGGTGCAAACACGAGGGATACTAGTATTAGTACGA ACGCAAGCGGCCATCGGAACGGCAACAGGAACGGCAACAGCCAGAATAGC GGCTTTTCGAATAATTTCGCGATGTCTCCAATTAGCGCCTTCGACCAGAA GCTCCGACGGAAGAAGCGATCCTCGAGCTTCGGAGGCAGTGAGGCAACAA GATCGTCGCGGTGCAAACACGAGGGATACTAGTATTAGTACGAACGCAAG CGGCCATCGGAACGGCAACAGGAACGGCAACAGCCAGAATAGCGGCTTTT CGAATAATTTCGCGATGTCTCCAATTAGCGCCTTCGACCAGAAGCTCCGA CGGAAGAAGCGATCCTCGAGCTTCGGAGGCAGTGAGACCTGGAACGAGAC GATCGAGGGCATGGTGGCAGCGCAGAGAGAGAACGAAAAGAGAATGGCCA CGTTGCAGAGGGAGGAGCTAGAGCAGACCTGGAACGAGACGATCGAGGGC ATGGTGGCAGCGCAGAGAGAGAACGAAAAGAGAATGGCCACGTTGCAGAG GGAGGAGCTAGAGCAGCTGTCCGAAATGGATATGGAAAAGAAGCGCCGGC ACGAAAGGAAGAAGAAAAACAGGGGGAAAGATAAGAGGGAGGACAAGAAA GACAAGAGAACTATCAGCAATACGAACAAAGCCGTCGCGGCAACGGCTGT AGGGGTGTCTTGGCTCACTGCCGGGGTGGCCACGGGCGGCCTTTTGATCG CCGGGACACTTGTGGCCGCCGGCATCACCGTCACCGTGGGGTCCATGGGA GCTGTCCGAAATGGATATGGAAAAGAAGCGCCGGCACGAAAGGAAGAAGA AAAACAGGGGGAAAGATAAGAGGGAGGACAAGAAAGACAAGAGAACTATC AGCAATACGAACAAAGCCGTCGCGGCAACGGCTGTAGGGGTGTCTTGGCT CACTGCCGGGGTGGCCACGGGCGGCCTTTTGATCGCCGGGACACTTGTGG CCGCCGGCATCACCGTCACCGTGGGGTCCATGGGAGCTTATAGCAGGTAC AAAAAAAAGAACCAGAACGGTGCTCCCAGTCGGCTACGTCTCGCCAGCGA CAAGCTTATAGCAGGTACAAAAAAAAGAACCAGAACGGTGCTCCCAGTCG GCTACGTCTCGCCAGCGACAAGCTGGAAGTTGTTCAGCAGTGGCGAGCCG CCATTCTAGAGCAAGTGTCAATGCTTCGAGCGCAGTCCTCTCTAGCCGAG GAGGCCGAACCGTGGATGGGCAGGGGCTTTGGGCTATGGGCGGCGCGTCC CCCCGAGGGACTCCCCCCCGCCCTTAAGGCGATAGATTTGAGACTTGTGG ACGACATGCTGAGCAACGCTTCGTGGCTGGAAGTTGTTCAGCAGTGGCGA GCCGCCATTCTAGAGCAAGTGTCAATGCTTCGAGCGCAGTCCTCTCTAGC CGAGGAGGCCGAACCGTGGATGGGCAGGGGCTTTGGGCTATGGGCGGCGC GTCCCCCCGAGGGACTCCCCCCCGCCCTTAAGGCGATAGATTTGAGACTT GTGGACGACATGCTGAGCAACGCTTCGTGGACTTCGCGAGGTGTGATGCA GGGCTTGCCGATATTAGAGCAACAAGTGCTGGAGCTTGGTAGTGAGGCTG GCGCTGCGACTGAAGCTGGGGTTTCGCCAGGCACCGGGTGGGAGCTCGGC GGGTCGGGGCGTGTTCTCAAGACGCAGACTATCACTTCGCGAGGTGTGAT GCAGGGCTTGCCGATATTAGAGCAACAAGTGCTGGAGCTTGGTAGTGAGG CTGGCGCTGCGACTGAAGCTGGGGTTTCGCCAGGCACCGGGTGGGAGCTC GGCGGGTCGGGGCGTGTTCTCAAGACGCAGACTATCGTTCGGGCCAGTCC CTTGGAAACGTTCGTGGCGCTCATGGGAGCCCCGAAGCACTCGATGAACG CGGTGATGAGCGGCACATTCACGGTACAGTCTCTGGACGACCACTCCGAC GTGGTCCGGCTGTGCCTCCGTCCGGCGTGGCTGAAGATGGCGTGGGCCTC CCCGAGGGACTTTTGTCTAGCCAGGTTCGGGCCAGTCCCTTGGAAACGTT CGTGGCGCTCATGGGAGCCCCGAAGCACTCGATGAACGCGGTGATGAGCG GCACATTCACGGTACAGTCTCTGGACGACCACTCCGACGTGGTCCGGCTG TGCCTCCGTCCGGCGTGGCTGAAGATGGCGTGGGCCTCCCCGAGGGACTT TTGTCTAGCCAGGTACTGGCACATGTCGGAAGACGGATGCTACATCGTCA CCCTCTCGAGCATGAAGCACCCTCTTTGCCCCATGGATCCCGCGTTCGTC AGGGGTACTGGCACATGTCGGAAGACGGATGCTACATCGTCACCCTCTCG AGCATGAAGCACCCTCTTTGCCCCATGGATCCCGCGTTCGTCAGGGGCGA GGCCCAGCTGGTGTACACGATCTCCCCTCGGAGGGAGTCCCTCTCGATGC CGAGTGGGCATGCGTCTCCCGAGTGCTTGCTATGTTGTCACGTTCAGGTT GCGAGGCCCAGCTGGTGTACACGATCTCCCCTCGGAGGGAGTCCCTCTCG ATGCCGAGTGGGCATGCGTCTCCCGAGTGCTTGCTATGTTGTCACGTTCA GGTT back to top
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