mRNA_H-elongata_contig58128.13291.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: D7FWX4_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWX4_ECTSI) HSP 1 Score: 340 bits (871), Expect = 3.970e-104 Identity = 180/238 (75.63%), Postives = 194/238 (81.51%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSS-GDGAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDS------GGDPGCSKNNGQASIQVSFCEIYNEQVRDLFYEGGGGQGLRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
QVRPFSEKEK G CVISM +QTKILDPAFFDSE+G+SS DRSMWERTFNFDHSFWSHSS G G GG F SSQADV++ALG FL+DNAC+GFNCSLFAYGQTGSGKTYTMLGDSSDLTSA G GTAGLIPR+CV LF+RFGLS+S G + +GQASIQVSFCEIYNEQVRDLF EGG G GLRVREHPT+GAFVEGLSAR V YQQVQ LLEDGMS+R
Sbjct: 5 QVRPFSEKEKLAGKRCVISMAANQTKILDPAFFDSEDGSSSPGDRSMWERTFNFDHSFWSHSSAGRGLGGGRF-------SSQADVHQALGIFLLDNACRGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAAGEGTAGLIPRICVELFERFGLSNSREADCRGAAENAFRKSGQASIQVSFCEIYNEQVRDLFAEGGSGHGLRVREHPTKGAFVEGLSARPVVCYQQVQQLLEDGMSAR 235
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: A0A8B6ET91_MYTGA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6ET91_MYTGA) HSP 1 Score: 154 bits (390), Expect = 3.940e-41 Identity = 90/233 (38.63%), Postives = 133/233 (57.08%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGD-GAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFYEGGGGQG-LRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+++EK G+ C+ISM G T I +P EN + + F+FDHS+WSH+ D G + + G YS Q VY LG+ ++DNA QG+N +LFAYGQTGSGK+Y+M+G S+ G++P +C LF+ +D + Q + S EIYNEQVRDL + QG L++R++P G +VEGL V +Y++++ L+E G +R
Sbjct: 11 RVRPFNQREKNAGSKCIISMSGQTTTIKNP-----ENNET---------KAFSFDHSYWSHTDFDENELGLNIAKAGSNYSDQRQVYNDLGKGVLDNAWQGYNAALFAYGQTGSGKSYSMIGYGSN---------KGIVPILCEELFKAVEQNDD--------KSKQLQVSFSMLEIYNEQVRDLLVKAKPQQGGLKIRQNPQSGFYVEGLRLVPVRNYKEIENLMEQGTVNR 212
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: C1MNZ0_MICPC (Kinesin-like protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MNZ0_MICPC) HSP 1 Score: 151 bits (381), Expect = 1.590e-40 Identity = 95/242 (39.26%), Postives = 129/242 (53.31%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGDGAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFYEGGGGQ-----------GLRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+ RPF+ +EKQ + CV+ MDG++T I +P NG S TF FDHSFWSH D +GG RGG ++SQ V+ LG L++NA G+N L AYGQTGSGK+Y+M+G AG++PR +F R DS A ++V+ EIYNE+V+DL GGGG GL++R HPTRG +VEGL+ Y +V L++ G +R
Sbjct: 8 RCRPFNAREKQLSSPCVVKMDGARTTITNPV-----NGTS---------HTFEFDHSFWSH---DPSGGG---RGGPTHASQETVFDELGRDLLENAWAGYNVCLVAYGQTGSGKSYSMMGXXXXXXDH-----AGVVPRAAREIFDRMRGDDS------------ARVEVTMIEIYNERVKDLLNAGGGGGSTNPFAENGGGGLKIRTHPTRGPYVEGLTPCAARDYDEVVRLMDRGEKAR 212
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: A0A8B6EUL5_MYTGA (Kinesin motor domain-containing protein (Fragment) n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EUL5_MYTGA) HSP 1 Score: 154 bits (390), Expect = 4.710e-40 Identity = 90/233 (38.63%), Postives = 133/233 (57.08%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGD-GAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFYEGGGGQG-LRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+++EK G+ C+ISM G T I +P EN + + F+FDHS+WSH+ D G + + G YS Q VY LG+ ++DNA QG+N +LFAYGQTGSGK+Y+M+G S+ G++P +C LF+ +D + Q + S EIYNEQVRDL + QG L++R++P G +VEGL V +Y++++ L+E G +R
Sbjct: 11 RVRPFNQREKNAGSKCIISMSGQTTTIKNP-----ENNET---------KAFSFDHSYWSHTDFDENELGLNIAKAGSNYSDQRQVYNDLGKGVLDNAWQGYNAALFAYGQTGSGKSYSMIGYGSN---------KGIVPILCEELFKAVEQNDD--------KSKQLQVSFSMLEIYNEQVRDLLVKAKPQQGGLKIRQNPQSGFYVEGLRLVPVRNYKEIENLMEQGTVNR 212
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: A0A6J8EDJ7_MYTCO (Kinesin motor domain-containing protein n=3 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EDJ7_MYTCO) HSP 1 Score: 154 bits (388), Expect = 3.280e-39 Identity = 90/233 (38.63%), Postives = 133/233 (57.08%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGD-GAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFYEGGGGQG-LRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+++EK G+ C+ISM G T I +P EN + + F+FDHS+WSH+ D G + + G YS Q VY LG+ ++DNA QG+N +LFAYGQTGSGK+Y+M+G S+ G++P +C LF+ +D + Q + S EIYNEQVRDL + QG L++R++P G +VEGL V +Y++++ L+E G +R
Sbjct: 11 RVRPFNQREKNAGSKCIISMSGQTTTIKNP-----ENNET---------KAFSFDHSYWSHTDFDENELGLNVAKAGSNYSDQRQVYNDLGKGVLDNAWQGYNAALFAYGQTGSGKSYSMIGYGSN---------KGIVPILCEELFKAAEQNDD--------KSKQLQVSFSMLEIYNEQVRDLLVKAKPQQGGLKIRQNPQSGFYVEGLRLVPVRNYKEIENLMEQGTVNR 212
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: A0A6J3HFZ5_SAPAP (Kinesin-like protein n=4 Tax=Eutheria TaxID=9347 RepID=A0A6J3HFZ5_SAPAP) HSP 1 Score: 146 bits (369), Expect = 3.730e-39 Identity = 86/231 (37.23%), Postives = 128/231 (55.41%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGDGAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFYEGGGGQGLRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+ +E + C+I M GS T I++P + ++F+FD+S+WSH+S + Y+SQ VYR +GE ++ +A +G+N +FAYGQTG+GK+YTM+G G+IP++C LF R ++D+ S +N S++VS+ EIY E+VRDL G LRVREHP G +VE LS V SY +Q L++ G +R
Sbjct: 11 RVRPFNSREMSRDSKCIIQMSGSTTTIINP------------KQPKETPKSFSFDYSYWSHTSPEDIN----------YASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEK-------DQQGIIPQLCEDLFSR--INDT------SNDNMSYSVEVSYMEIYCERVRDLLNPKNKGN-LRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKAR 203
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: U4LC25_PYROM (Similar to Kinesin-like protein KIF1A acc. no. Q12756 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LC25_PYROM) HSP 1 Score: 152 bits (383), Expect = 1.660e-38 Identity = 84/231 (36.36%), Postives = 138/231 (59.74%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGDGAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFYEGGGGQGLRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+ +EK+ GA C++ M +QT + PA +++ GA ++ + FNFD S+WS F++ Y+ Q ++Y+ LGE L+DNA G+N +FAYGQTGSGK+Y+M+G + G+IP++C +F+R ++ DP + + +++VS+ EIYNE+VRDL GL+VREHP+ G +VE L+ V S+ +++ L+++G +R
Sbjct: 13 RVRPFNSREKERGAKCIVQMKDTQTVLTPPAGSENKAGAKGGA-KNHGPQVFNFDRSYWS-----------FSKNDPTYAGQDNLYQDLGEPLLDNAFGGYNNCIFAYGQTGSGKSYSMMGYGEEY---------GVIPKICQNMFERINVAQK--DP-----HLKCTVEVSYLEIYNERVRDLLNPSTKA-GLKVREHPSTGPYVEDLAKLVVGSFAEIEHLMDEGNKAR 214
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: F4PIU5_CAVFA (Kinesin-3 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PIU5_CAVFA) HSP 1 Score: 150 bits (380), Expect = 4.030e-38 Identity = 88/234 (37.61%), Postives = 131/234 (55.98%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGDGAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQA--SIQVSFCEIYNEQVRDLFY-EGGGGQGLRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+ +EK+ A C++ M G+ T ++ P + A S+D E++F FDHS+WS S D ++SQ V+ LG ++ NA +GFNCS+FAYGQTGSGK+Y+MLG + G+IP +C +F R + S N Q ++VSF EIYNE+V+DL + GL+VR HPT G +VE LS V S+ +++ L+++G +R
Sbjct: 10 RVRPFNSREKERNAECIVKMSGNSTSLVRPTALRANPLAPVSQDD---EKSFTFDHSYWSFDSDDSN-----------FASQTTVFDDLGREVLQNAWEGFNCSIFAYGQTGSGKSYSMLGYGEE---------KGIIPLVCEEMFNRINNT-------VSNENEQIVFKVEVSFMEIYNERVKDLLNPKNNKPGGLKVRNHPTTGPYVEDLSKLAVKSFPEIEMLMDEGSKAR 213
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: D3B143_POLPP (Kinesin-3 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B143_POLPP) HSP 1 Score: 150 bits (379), Expect = 5.740e-38 Identity = 87/233 (37.34%), Postives = 135/233 (57.94%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDP-AFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGDGAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFY-EGGGGQGLRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+ +EK+ A C++ M+G+ T ++ P A + N ++ED E++F FDHS+WS S D ++SQ V+ LG ++ NA +GFNC++FAYGQTGSGK+Y+MLG D G+IP +C +F R G + S + ++VSF EIYNE+V+DL + GL+VR +P+ G +VE LS V S+Q+++ L+++G +R
Sbjct: 10 RVRPFNSREKERNAECIVKMNGNTTLLVRPSALRANPNAPPTAED----EKSFTFDHSYWSFDSDDPN-----------FASQTTVFDDLGREVLQNAWEGFNCTIFAYGQTGSGKSYSMLGYGED---------KGIIPLVCEEMFNRIGNTVSN-----EREQTVFKVEVSFMEIYNERVKDLLNPKNNKPGGLKVRNNPSTGPYVEDLSKLAVKSFQEIEMLMDEGSKAR 213
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Match: F0ZAX7_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZAX7_DICPU) HSP 1 Score: 149 bits (376), Expect = 1.460e-37 Identity = 87/233 (37.34%), Postives = 134/233 (57.51%), Query Frame = 1
Query: 1 QVRPFSEKEKQNGAHCVISMDGSQTKILDP-AFFDSENGASSSEDRSMWERTFNFDHSFWSHSSGDGAGGTDFTRGGDCYSSQADVYRALGEFLVDNACQGFNCSLFAYGQTGSGKTYTMLGDSSDLTSAVGGGTAGLIPRMCVGLFQRFGLSDSGGDPGCSKNNGQASIQVSFCEIYNEQVRDLFY-EGGGGQGLRVREHPTRGAFVEGLSARRVASYQQVQGLLEDGMSSR 693
+VRPF+E+EK+ A ++ M+G+ T + P A + ++ED E++F FDHS+WS F + ++SQA VY LG+ ++ NA +GFNCS+FAYGQTGSGK+Y+MLG + D G+IP +C +F+R + P S ++VSF EIYNE+V+DL + GL+VR +P+ G +VE LS V S+ ++ L+++G +R
Sbjct: 9 RVRPFNEREKERNAELIVDMNGNSTVLTRPSALRVNPTAPPTAED----EKSFTFDHSYWS-----------FNQSDPHFASQATVYNDLGKEVLKNAWEGFNCSIFAYGQTGSGKSYSMLGYNED---------KGIIPLVCEEMFERINAT-----PASSTEQTVFKVEVSFMEIYNEKVKDLLNPKNNKPGGLKVRNNPSTGPYVEDLSKLAVKSFAEIDMLMDEGTKAR 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58128.13291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58128.13291.1 >prot_H-elongata_contig58128.13291.1 ID=prot_H-elongata_contig58128.13291.1|Name=mRNA_H-elongata_contig58128.13291.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp QVRPFSEKEKQNGAHCVISMDGSQTKILDPAFFDSENGASSSEDRSMWERback to top mRNA from alignment at H-elongata_contig58128:1756..3147+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58128.13291.1 ID=mRNA_H-elongata_contig58128.13291.1|Name=mRNA_H-elongata_contig58128.13291.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1392bp|location=Sequence derived from alignment at H-elongata_contig58128:1756..3147+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58128:1756..3147+ >mRNA_H-elongata_contig58128.13291.1 ID=mRNA_H-elongata_contig58128.13291.1|Name=mRNA_H-elongata_contig58128.13291.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1386bp|location=Sequence derived from alignment at H-elongata_contig58128:1756..3147+ (Himanthalia elongata Himel1 dioecious)back to top |