mRNA_H-elongata_contig58126.13290.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A6H5L4T2_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T2_9PHAE) HSP 1 Score: 346 bits (888), Expect = 2.380e-117 Identity = 163/199 (81.91%), Postives = 179/199 (89.95%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKFPGSVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTVVELPTSKHSG 597
RGFPAYCADLTR GWI GLLPSALS EY KGEL P+ TL+FYY+AIDRAL E+K+ HPGQ +HV+GHSIGGWVAR+WLAE C+ DR+NVLSLTTLGTPNTGP +DAG WAAVDQTRGLLK IN RFPGAHV+GVRYTSVAG A+EGK PGSVEEMLA+VSYLPLCGDGG+RGDGIIP DVA LEGSTVVELP+SKHSG
Sbjct: 109 RGFPAYCADLTRFGWITGLLPSALSPEYVKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVIGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWAAVDQTRGLLKYINARFPGAHVEGVRYTSVAGTALEGKLPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPSSKHSG 307
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A835ZI81_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI81_9STRA) HSP 1 Score: 224 bits (571), Expect = 2.800e-70 Identity = 115/200 (57.50%), Postives = 136/200 (68.00%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKFPG-SVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTVVELPTSKHSG 597
RG Y A L R+GWI GLLPSAL+++YFKG L PS+TL+FYY AID+ L +K HP + H+VGHSIGGWVAR WL+E S DR VLSLTTLGTPN P D+ A VDQTRGLLK INE FP V GV+YTSV G +FP V+EMLA +SYLPL G GDGI+P ++GS + LP +KHSG
Sbjct: 35 RGHQVYGAQLQRVGWILGLLPSALTLDYFKGTLQPSKTLKFYYDAIDKGLESLKAQHPDEPFHLVGHSIGGWVARGWLSERASAADRARVLSLTTLGTPNREPPPDSPL-AKVDQTRGLLKFINENFPAGSVPGVKYTSVVGTGTLARFPSLDVQEMLAAISYLPLGGAPDGLGDGIVPWRAGIMDGSESIILPDAKHSG 233
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: W7TPL2_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL2_9STRA) HSP 1 Score: 201 bits (512), Expect = 4.910e-61 Identity = 99/200 (49.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPD-RDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKFPGSVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTVVELPTSKHSG 597
RG PAY DL+R W+ + SA++ +Y++G L PS TL FY+ A + VK +P + +H+V HSIGGWVAR++ E D +SLTTLG+PN P G W ++DQTRGLL+ +N RFPGA G++Y SV G +G+F G +EE +A++SYLPLCG G A GDGIIP VA LEGST V + +KHSG
Sbjct: 76 RGHPAYAVDLSRFDWL-KITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGEVADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKGRFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSG 274
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A7S3YIH2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIH2_HETAK) HSP 1 Score: 201 bits (512), Expect = 1.170e-60 Identity = 93/198 (46.97%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 4 GFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKFPGSVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTVVELPTSKHSG 597
G AY AD+ R W+ ++P+ +++Y+ G L P LQF+++ ID+ + VKK +PG+ V+++GHSIGGW+ RS+L E C+ +R+ SLT LG+P P + WAA DQTRGLL+++N FPGA G+RYT+VAGA EG G ++ +A+ SYLPLCGDG RGDGI+P + A LEG+ + L KH+G
Sbjct: 123 GHKAYVADIGRSDWL-KIVPATFTIDYWTGNLKPKNCLQFFFEGIDKTMERVKKENPGEQVNIIGHSIGGWIVRSYLGEVCTSAEREAFCSLTLLGSPQQTPPEGT-VWAAADQTRGLLRHVNANFPGAFHPGLRYTAVAGAGQEGSLAGGLQAAVAYSSYLPLCGDGNCRGDGIVPVETALLEGAEALVLEGVKHAG 318
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A0G4HP68_9ALVE (GPI inositol-deacylase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HP68_9ALVE) HSP 1 Score: 195 bits (495), Expect = 2.420e-58 Identity = 101/202 (50.00%), Postives = 132/202 (65.35%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKF--PGSVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTV-VELPTSKHSG 597
RGFPAY ADL R W F L+P + + +Y+KG L PS+ L+FYY+AI R + V + HP Q +H+VGHSIGGWVAR +LAE + + + SLTTLG+PN +DA A+DQTRGLL +N ++PGA +GVRY S G+ + G+ P E LAF+SY LCG GG GDGI+P VA LEG ++L KH+G
Sbjct: 97 RGFPAYVADLGRSDW-FELIPHSFTADYWKGTLQPSKVLRFYYRAIQRTVDLVAEQHPNQQIHLVGHSIGGWVARLFLAEEADEDTQKRIRSLTTLGSPNKALPEDAPL--AIDQTRGLLSYVNSKYPGATCEGVRYFSAGGSRVRGQVEVPPDFESALAFLSYFALCGKGGEAGDGIVPYSVAELEGGERHLDLGDVKHTG 295
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A0G4FAT1_VITBC (AB hydrolase-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FAT1_VITBC) HSP 1 Score: 192 bits (489), Expect = 6.080e-58 Identity = 98/202 (48.51%), Postives = 140/202 (69.31%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVL-SLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGA-HVDGVRYTSVAGAAIEGKF-PGSVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTVVELPTSKHSG 597
RG+PAY DL RL W+ L+PS+L++ Y++G+L PS+ LQFYY+A+ R++ V++ HP Q +H+VGHSIGGW+ R++LAE +R ++ SLTTLGTP+ P D+ +A DQTRGLL I + +PGA H D + Y SV GA+++G G +E +LA+ SYL LCG+G GDG++P+ A L GS+ + L KHSG
Sbjct: 50 RGYPAYAVDLKRLDWL-ELIPSSLTLAYWQGKLEPSKVLQFYYRALRRSVTSVREAHPEQRMHLVGHSIGGWIVRAFLAEEYDDDERASLFTSLTTLGTPHNPPPADS-PFAQFDQTRGLLTYIADNYPGAFHSDHINYNSVVGASVKGGLGEGGLEGLLAYASYLALCGEGDTTGDGVVPQSTALLPGSSTMVLEDVKHSG 249
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A7S2UYV4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV4_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.640e-57 Identity = 91/199 (45.73%), Postives = 136/199 (68.34%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKFPGSVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTVVELPTSKHSG 597
RG AY A+L+R W+ ++P+ L+ +Y++G L P E L F+++ +++AL +V++ +PG +H VGHSIGGW+AR++L E C + + SLTTLGTP+ GP D+ A+ +QTRGLL +N FPGA+ ++YT V G+A +G +VEE+LA+ SYLPLCG G A GDGI+P A L+ + + +P +KHSG
Sbjct: 93 RGHRAYVAELSRADWL-RIVPATLTADYWRGTLKPKECLGFFFEGVEKALRKVQEENPGSQIHAVGHSIGGWIARAYLGEVCDEATCNQFCSLTTLGTPHQGPPADS-PMASFEQTRGLLSYVNTNFPGAYHGHMKYTCVCGSAQQGAIGANVEEVLAYASYLPLCGKGEAHGDGIVPLQAAFLDDAERIIIPEAKHSG 289
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A7S4PV97_9DINO (GPI inositol-deacylase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PV97_9DINO) HSP 1 Score: 168 bits (425), Expect = 7.780e-46 Identity = 99/209 (47.37%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVK----KNHPGQCVHVVGHSIGGWVARSWLAEHCS-KPDRDNVLSLTTLGTPNTGPRDDAGAWA-AVDQTRGLLKNINERFPGA-HV-DGVRYTSVAGAAIEGKFP------------GSVEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTV 567
RG P + A L +L W F L+PS LS EY+ GEL P + LQFYY+A++ A+ + + K G +H+V HSIGGW+AR+++ E + + + +V SL TLGTP+ P G+W DQTRGLLK IN FPGA H +GVRY SV G A++G P G +E LA+ SYL LCGDGGARGDGI P A L G V
Sbjct: 308 RGHPVFLAPLDKLNW-FELVPSFLSKEYWTGELRPGKVLQFYYRALEAAVADARSYLAKRGTGGQIHIVAHSIGGWIARAFMGEVLAPRGELVDVASLVTLGTPHAEPP--KGSWMETADQTRGLLKYINSEFPGAFHAGEGVRYISVGGGAVQGGLPLPFGLGGEGAEGGPIERALAWASYLALCGDGGARGDGITPLACALLPGDGV 513
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A7S2GTW5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GTW5_9EUKA) HSP 1 Score: 160 bits (404), Expect = 6.400e-44 Identity = 87/191 (45.55%), Postives = 116/191 (60.73%), Query Frame = 1
Query: 4 GFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKFPGS-----VEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGS 561
G P A LT W F L+P+ L+ EY++G+L P L FYY+AI + E+ K +PG+ + +V HSIGGW+ RS+L + S DR +L TLGTP+ P + G + +DQTRGLL+ + ER+PGA+ +RY SV A+ G P S +E LA SYLPLCGD RGDGI P A LEG+
Sbjct: 181 GHPVMVAPLTPFEW-FRLIPATLTAEYWRGDLSPDVALPFYYEAIAKGAEELTKAYPGRKISLVAHSIGGWITRSYLGQ-LSDDDRSKFGALVTLGTPHAPPPE--GFFRTLDQTRGLLRFVEERYPGAYHPELRYMSVGSDAVAGSLPWSSNGRLLESTLALASYLPLCGDAFIRGDGITPLACAHLEGA 367
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Match: A0A6T8LL13_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8LL13_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.290e-40 Identity = 84/199 (42.21%), Postives = 114/199 (57.29%), Query Frame = 1
Query: 1 RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALHEVKKNHPGQCVHVVGHSIGGWVARSWLAEHCSKPDRDNVLSLTTLGTPNTGPRDDAGAWAAVDQTRGLLKNINERFPGAHVDGVRYTSVAGAAIEGKFPGS-VEEMLAFVSYLPLCGDGGARGDGIIPRDVATLEGSTVVELPTSKHS 594
RG+P Y L+ L W+ + SA S Y KGEL P L FY A+D + + P ++ HSIGGWVAR+WL E S+ R + +LGTP+ P ++ + VDQTRGLLK +N+++PGA+ D V YT VA A+ GK S ++ +L +VSYL L GDG GDGI P A LEG+ + L H+
Sbjct: 158 RGYPVYLTRLSALQWL-SITKSAFSAAYIKGELEPRNALGFYMNAVDETIQRLPT--PDTKYTILSHSIGGWVARAWLGEVASESVRKRCTNFVSLGTPHLAPPPESLV-SKVDQTRGLLKYVNDKWPGAYWDDVSYTCVASKAVPGKLGFSDLDCLLGYVSYLALIGDGKVDGDGITPVKGALLEGAASIVLDDVYHA 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58126.13290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58126.13290.1 >prot_H-elongata_contig58126.13290.1 ID=prot_H-elongata_contig58126.13290.1|Name=mRNA_H-elongata_contig58126.13290.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp RGFPAYCADLTRLGWIFGLLPSALSVEYFKGELVPSETLQFYYKAIDRALback to top mRNA from alignment at H-elongata_contig58126:945..2578- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58126.13290.1 ID=mRNA_H-elongata_contig58126.13290.1|Name=mRNA_H-elongata_contig58126.13290.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1634bp|location=Sequence derived from alignment at H-elongata_contig58126:945..2578- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58126:945..2578- >mRNA_H-elongata_contig58126.13290.1 ID=mRNA_H-elongata_contig58126.13290.1|Name=mRNA_H-elongata_contig58126.13290.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig58126:945..2578- (Himanthalia elongata Himel1 dioecious)back to top |