mRNA_H-elongata_contig5809.13281.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: D8LSQ9_ECTSI (Similar to kinesin-C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ9_ECTSI) HSP 1 Score: 154 bits (390), Expect = 9.190e-42 Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
Q LRKKYWNMMEDMKGKIRV+ARCRP AQYEL ++CKRAVR +D++TVEVDGHHGAKQFVFD+VF+EEH Q IF++TRNLVQS+LDG++
Sbjct: 1661 QSLRKKYWNMMEDMKGKIRVFARCRPLAQYELNQDCKRAVRFVDDSTVEVDGHHGAKQFVFDSVFSEEHGQAAIFEDTRNLVQSALDGFN 1750
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A6V1MSS8_HETAK (Kinesin-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSS8_HETAK) HSP 1 Score: 134 bits (336), Expect = 5.030e-35 Identity = 60/90 (66.67%), Postives = 76/90 (84.44%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
Q LRKKYWNMMEDMKGKIRVYARCRP A+YELER C++AVR +DETT+E++ HG KQFV+D VF+ + Q +F++T+NL+QS LDGY+
Sbjct: 139 QALRKKYWNMMEDMKGKIRVYARCRPMAKYELERGCQQAVRFVDETTIEINSAHGPKQFVYDAVFSPANTQEDVFEDTKNLMQSCLDGYN 228
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A2R5GRQ6_9STRA (Kinesin-like protein KIN-14E n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRQ6_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.360e-29 Identity = 56/90 (62.22%), Postives = 70/90 (77.78%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
Q LRK+YWNMMEDMKGKIRV+ARCRP AQYEL+RNC + V DE T++V + G KQFV+D F + Q IF++T+NL+QSSLDGY+
Sbjct: 955 QKLRKEYWNMMEDMKGKIRVFARCRPMAQYELDRNCHQVVSFPDEFTLDVVSNKGPKQFVYDRCFGPDSTQDSIFEDTQNLIQSSLDGYN 1044
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A7S1U107_9STRA (Kinesin-like protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U107_9STRA) HSP 1 Score: 113 bits (282), Expect = 8.570e-28 Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
+ LR+KYWNMMEDMKGKIRVYARCRPFAQYE ER + V +DE+T+ VD G ++F +DNVF Q +F E +L+QS+LDGY+
Sbjct: 34 KTLRRKYWNMMEDMKGKIRVYARCRPFAQYEKERGASQVVTFVDESTLAVDTSRGPREFTYDNVFAPGSTQQEVFDECSSLMQSALDGYN 123
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A7S0U2Q0_HEMAN (Kinesin-like protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U2Q0_HEMAN) HSP 1 Score: 112 bits (280), Expect = 3.850e-27 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVD-GHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
Q LRKKY+N +EDMKGKIRVYARCRPFA+YE E+NC++AV+ +D+ + EVD G G K+F FD VF E+ Q IF+ +LVQS++DGY+
Sbjct: 100 QQLRKKYYNQIEDMKGKIRVYARCRPFAKYEKEKNCQQAVKFLDDMSCEVDVGKKGKKEFTFDEVFREDSRQEQIFEGVSHLVQSAVDGYN 190
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A7S2H4N7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H4N7_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.070e-26 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 1
Query: 7 LRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVD--GHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
LRKKY+N +EDMKGKIRV+ARCRP A+YELE+NC++ +R +DE +E++ G+ K+F FD F Q +F++ RNLVQS +DGY+
Sbjct: 3 LRKKYYNKIEDMKGKIRVFARCRPMAKYELEKNCEQIIRFVDEQEMEIETSGNRDNKKFTFDASFDPMSTQEAVFEDCRNLVQSCMDGYN 92
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A1V9ZIU4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIU4_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.880e-26 Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
Q LRKKY+N +EDMKGKIRVY RCRP + ELER C+ AVR +DE T+E+D G K F +D VF + Q +F++T+NL+QS+LDGY+
Sbjct: 296 QTLRKKYYNTIEDMKGKIRVYCRCRPMSGSELERGCQSAVRFLDECTLELDTPRGPKSFAYDQVFNPANTQEQVFEDTKNLLQSALDGYN 385
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A2D4BUC0_PYTIN (Kinesin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUC0_PYTIN) HSP 1 Score: 110 bits (275), Expect = 3.020e-26 Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
Q LRKKY+N +EDMKGKIRVYARCRP +Q E ER C VR +DE ++E+ HG K F +D VFT Q +F++T+NL+QS+LDGY+
Sbjct: 1158 QTLRKKYYNQIEDMKGKIRVYARCRPMSQSETERGCAPCVRFLDEFSLELKTSHGPKTFAYDQVFTPSSTQEQVFEDTKNLLQSALDGYN 1247
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: C3YQ47_BRAFL (Kinesin motor domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YQ47_BRAFL) HSP 1 Score: 110 bits (274), Expect = 4.080e-26 Identity = 51/90 (56.67%), Postives = 70/90 (77.78%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
+VLRKKY+NM+EDMKGKIRVY R RP + ELER + +R DE T++VD + G K+F FD++F EEH+Q IF++T NL+QS++DGY+
Sbjct: 731 RVLRKKYYNMVEDMKGKIRVYCRARPLSGSELERGNVKIIRSPDEYTIQVDSNRGTKEFQFDSIFGEEHSQDKIFEDTNNLIQSAVDGYN 820
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Match: A0A1V9YU11_9STRA (Kinesin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YU11_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.620e-26 Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 1
Query: 1 QVLRKKYWNMMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFVFDNVFTEEHNQGVIFQETRNLVQSSLDGYD 270
Q LRKKY+N +EDMKGKIRVY RCRP + ELER C+ AVR +DE T+E++ G K F +D VF + Q +F++T+NL+QS+LDGY+
Sbjct: 1014 QALRKKYYNTIEDMKGKIRVYCRCRPMSGSELERGCQSAVRFLDEYTLELETSRGPKSFAYDQVFNPSNTQDQVFEDTKNLLQSALDGYN 1103 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5809.13281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5809.13281.1 >prot_H-elongata_contig5809.13281.1 ID=prot_H-elongata_contig5809.13281.1|Name=mRNA_H-elongata_contig5809.13281.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp MMEDMKGKIRVYARCRPFAQYELERNCKRAVRLIDETTVEVDGHHGAKQFback to top mRNA from alignment at H-elongata_contig5809:93..542- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5809.13281.1 ID=mRNA_H-elongata_contig5809.13281.1|Name=mRNA_H-elongata_contig5809.13281.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=450bp|location=Sequence derived from alignment at H-elongata_contig5809:93..542- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5809:93..542- >mRNA_H-elongata_contig5809.13281.1 ID=mRNA_H-elongata_contig5809.13281.1|Name=mRNA_H-elongata_contig5809.13281.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at H-elongata_contig5809:93..542- (Himanthalia elongata Himel1 dioecious)back to top |