prot_H-elongata_contig58034.13277.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58034.13277.1
Unique Nameprot_H-elongata_contig58034.13277.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length235
Homology
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 4.590e-124
Identity = 176/235 (74.89%), Postives = 195/235 (82.98%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            M+RT + A+A  ML   A +L+V TPS+GL VI+DRTYTVEW    S +RFEIDLYYCGS C+ED+CG+WVTALCPYG  GCPDNEGDYD+VMPEPM  TSGSGYKVRV D++DE D DCSDEFYL+AS E+P VGDEDGPTL VTSPA GD+A    EYTVEFDYDNGVGSSVDRF IDLY + G GDCGTYV SICDKP+IGCKDSMGDYDVEIP DT AG YKIRV RFEDD
Sbjct:    1 MTRTGFVALACGMLG-AANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDD 234          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 2.100e-122
Identity = 175/235 (74.47%), Postives = 196/235 (83.40%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            M+RT + A+A +ML   A +LEV+TPS  L+V++DRTYTVEW   DSG RFEIDLY+CGS C+ED CG+WVTALCPYG  GCPDNEGDYD+VMPEPM+  S SGYKVRVMDV+DE  +DCSD FYLMAS+++P  G E G  LTVTSPAEGD A AGEEYTVEFDYDNGVGS VDRF IDLY + G GDCGTYVTSICDKPSIGCKDSMGDYDVEIP DT AG YKIRVGRFED+
Sbjct:    1 MARTGFVALACAMLG-AANALEVVTPSADLIVVADRTYTVEWTGADSG-RFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDE 233          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 5.740e-115
Identity = 158/218 (72.48%), Postives = 183/218 (83.94%), Query Frame = 0
Query:   18 ARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            A +LEV+TP+EG +V++ R YTVEW    S +R+EIDLYYCGS C+EDECG+WVTALCPYG  GCPDNEGDYD+VMPEPM+ TSGSGYKVRV DV+D+   DCSDEFYLMA  E+P  GD  GP +TVTSP+ GD A AGEEYTVEFDYDNG+GSSV RF IDLY ++GSGDCGT++ ++CDKP+IGCKDSMGDYDVEIPED  AGMY IRVG FEDD
Sbjct:    5 ASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDD 222          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 1.840e-114
Identity = 164/235 (69.79%), Postives = 189/235 (80.43%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            M RT + A+A  ML   A +LEV+TP+ G +V+S R YTVEW+   S  RFEIDLYYC S C+EDECGEWVTALCPYG  GCPDNEGDYD+VMPEPM+ TSGSGYKVRV DV+DE   DCSDEFYLMA  ++P   D  GP +TVTSP+ GD A AGEEYTVEFDYDNG+GSSV RF IDLY ++GSGDCGT++ ++CDKP+IGCKDSMGDYDVEIPED  AGMY IRVG FED+
Sbjct:    2 MVRTGFVALACGMLGV-ASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDE 235          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 8.920e-107
Identity = 157/236 (66.53%), Postives = 182/236 (77.12%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDS----MGDYDVEIPEDTTAGMYKIRVGRF 232
            M+RT + A+A  ML   A +L+V TPS+GL VI+DRTYTVEW    S +RFEIDLYYCGS C+ED+CG+WVTALCPYG  GCPDNEGDYD+VMPEPM+ TSGSGYKVRV D++DE D DCSDEFYL+AS E+P VGDEDGPTL VTSPA GD+A    EYTVEFDYDNGVGS VDRF IDLY + G GDCGTYV SICDKP+IGCKDS     G + V+       G + + V R+
Sbjct:    2 MARTGFVALACGMLG-AANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDSNPVRRGRWRVQDSGGPLRGRFSLLVLRY 236          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 7.100e-104
Identity = 155/236 (65.68%), Postives = 188/236 (79.66%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYE-SSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            M+RT + A+A  ML   A +LEV++P+ G+ VI+DRTYTVEW  G S SRFEIDLYYCGS+C+EDECG+WVTALCPYG+ GCPD +GDYD+VMPEPM  TS SGYKV V D NDE+ + CS +F L+AS ++P  G E G +LTVTSP++GD A+AG  YTVE+DY+NG+GSS DRF IDLY   +G+GDCGTYV ++CDKPSIGC DS GDYDVEIP DT AGMY +RVG F DD
Sbjct:    1 MARTAFAALAFGMLG-AANALEVVSPAAGISVIADRTYTVEWT-GTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTS-SGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAG-EVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDD 232          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 2.690e-103
Identity = 155/235 (65.96%), Postives = 185/235 (78.72%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            M+RT + A+A  ML   A +LEV++P+ G +V++D  YTVEW    SG R++IDLYYCGS C+EDECG+WVTALCPYG  GCPD +GDYDVVMPEPM+ TS SGYKV V D +DE+D  CS +F L+AS E+P   D  G  ++VTSP++GD A+AG EYTVEFDYDNG+GSSV+RF IDLY S GSGDCGTYVT+ICDKPSIGCKDS GDYDV IP  T +GMY IRVG FEDD
Sbjct:    1 MARTAFAALAFGMLG-AANALEVVSPAAGDMVVADSAYTVEWTGATSG-RYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDM-GAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDD 231          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 6.720e-102
Identity = 148/235 (62.98%), Postives = 188/235 (80.00%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            M+RT + AVA  ML+  A +LEV++P  G+ V++DR YTVEW  G +  RFEIDLYYC S+C++D CG+WVTALCPYG+ GCPD+ GDYD++MPEPM+ TS SGYKV V +  DE+D+ CSD+F L+AS+++P  G E G +LTVTSP++GD A+AGE YTVE+DY+NG GSS DRF +DLY   G+GDCGTYVT++CD+PSIGC DS GDYDVEIP DT AGMY IRVG F+D+
Sbjct:    1 MARTAFAAVAFGMLS-AANALEVVSPDGGISVLADRAYTVEWT-GTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAG-EMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDE 231          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: A0A6H5JEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ8_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.630e-88
Identity = 135/173 (78.03%), Postives = 145/173 (83.82%), Query Frame = 0
Query:   63 VEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD 235
            VEDECGEWVTALCPYGS GCPDNEGDYD+VMPEPM+ TSGSGYKVRV DV+   D DCSDEFYLMAS E+PVVG  D P L VTSP+ GD A AG EYTVEFDYDNGVGS VDRFKIDLY   G+GDCGT+V ++CDK +IGCKDSMGDYDVEIPE    GMY IRVGRFEDD
Sbjct:   12 VEDECGEWVTALCPYGSEGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDGPQDADCSDEFYLMASAEAPVVGGPDAPYLMVTSPSAGDKAQAGGEYTVEFDYDNGVGSRVDRFKIDLYSIGGTGDCGTWVMNLCDKEAIGCKDSMGDYDVEIPETVVDGMYSIRVGRFEDD 184          
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.680e-80
Identity = 134/234 (57.26%), Postives = 157/234 (67.09%), Query Frame = 0
Query:    1 MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSRFEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDTSGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAEGDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDKPSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFED 234
            M+RT + A+A  ML     +LEV +P+ G ++++  + TVEW  G S  RF+IDLYYCGS C+EDECG+WVTALCPYG  GCPD +GDYDVVMPEPM+ TS SGYKV V D +DE+D+ CS EF L+AS                                  FD+DNG GSSV+RF IDLY S GSGDCGTYVTSICDK SIGCKDS GDYDV IP DT +GMY IRVG FED
Sbjct:    1 MARTAFAALAFGMLG-AVNALEVTSPAAGDMIVAASSTTVEWT-GTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDMGCSGEFTLVAS-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFED 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58034.13277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JRG9_9PHAE4.590e-12474.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYL2_ECTSI2.100e-12274.47EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D8LI46_ECTSI5.740e-11572.48EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFT9_9PHAE1.840e-11469.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH21_ECTSI8.920e-10766.53Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus... [more]
D7G3F0_ECTSI7.100e-10465.68EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G3E8_ECTSI2.690e-10365.96Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JY62_9PHAE6.720e-10262.98GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
A0A6H5JEJ8_9PHAE1.630e-8878.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP11_9PHAE1.680e-8057.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58034contigH-elongata_contig58034:2..2935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58034.13277.1mRNA_H-elongata_contig58034.13277.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58034 2..2935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58034.13277.1 ID=prot_H-elongata_contig58034.13277.1|Name=mRNA_H-elongata_contig58034.13277.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
MSRTIYFAVAVSMLARGARSLEVITPSEGLVVISDRTYTVEWNDGDSGSR
FEIDLYYCGSYCVEDECGEWVTALCPYGSTGCPDNEGDYDVVMPEPMNDT
SGSGYKVRVMDVNDETDVDCSDEFYLMASDESPVVGDEDGPTLTVTSPAE
GDVAIAGEEYTVEFDYDNGVGSSVDRFKIDLYESSGSGDCGTYVTSICDK
PSIGCKDSMGDYDVEIPEDTTAGMYKIRVGRFEDD
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