mRNA_H-elongata_contig58014.13275.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig58014.13275.1
Unique NamemRNA_H-elongata_contig58014.13275.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A535S533_9CHLR (DDE-type integrase/transposase/recombinase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535S533_9CHLR)

HSP 1 Score: 87.8 bits (216), Expect = 4.960e-16
Identity = 81/262 (30.92%), Postives = 117/262 (44.66%), Query Frame = 1
Query:    4 WVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLRLLT----RQLTLNHVAHVPNLGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLW------NIMKFHQVLGHPAEQITRKTARMAG-VQLSRIWQSCVHCSESRVRRYAVPKP---TENRADRRTVRLFFDLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSDA 747
            WV DSG+T+H+T         T  P    +E A  T +  +G G++RL       +LTL +V ++P  G +N+LS   L +   T       A L R +          LQ     L    R +V   + +   P  TA+AAT   +       N  K+HQ LGH   ++ +    +AG V  +     C  C   +     + KP    + RA R    +  DL GP   T  GG R+ M  IDD++R+KMV FLK KS+A
Sbjct:  312 WVLDSGSTNHITGRRDNFISGTFKPIKRSLEMADRTTVEALGIGNVRLRLYNPEHELTLQNVLYLPQSGNNNLLSMHLLAEKGITAKMDNKNAQLYRGKT---------LQ---ATLRKINRLYVLEGHTIK--PEETAMAATTNDIDDNKDNNNARKWHQRLGHAPARVIQAIPELAGTVSTTTTKTICESCIMGKF----IRKPFQLLQRRATRPLELVHTDLCGPMETTSTGGARYFMTFIDDYSRYKMVYFLKKKSEA 555          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A177VM55_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VM55_9BASI)

HSP 1 Score: 77.0 bits (188), Expect = 2.410e-12
Identity = 72/270 (26.67%), Postives = 128/270 (47.41%), Query Frame = 1
Query:    1 FWVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLRLLTRQ---LTLNHVAHVPN-LGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLWNI----MKFHQVLGHPAEQITRKTARMAGVQ-LSRIWQS---CVHCSESRVRRYAVPK--PTENRADRRTVRLFFDLLGPFHVTP---LGGNRFVMLCIDDFTRFKMVRFLKHKSDATNAL 759
            F++ D+ +T H+ +    L ++  AP G  +E A G ++ V GYG L+++T +   +TL  VAH P+ +G  N++  KRLT+     +    A+A +    GG P                +R  V   + + +  T+  +AA  +G  +I    +  H+ LGH  E++ +  A    +  L +       C  C++ ++ R    +  P E RA R    +  D  GP  +     LGG+++ ++ +DDFT+   V+ L  KSDA  ++
Sbjct:  334 FFILDTASTRHIVKSKGNLTEYRFAPPGSGIECANGGMMAVEGYGTLKVITEEGNIITLQDVAHCPSTIG--NLIGGKRLTKA-GCRITFDDASATVVTAEGGHPV---------------MRAEVRGGSWVVRLHTIQDIAALVKGEPDIDPVAVHAHRCLGHVNEKVLKAAAASGLIPGLPKTLGDIGFCSACAQGKLARTPHHRLSPLE-RATRAMELIHVDTFGPERMQDSKSLGGSKYGLVLVDDFTKHVWVKLLLRKSDAIKSI 584          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: UPI001652DC39 (uncharacterized protein LOC100279596 isoform X1 n=2 Tax=Zea mays TaxID=4577 RepID=UPI001652DC39)

HSP 1 Score: 76.6 bits (187), Expect = 3.250e-12
Identity = 74/263 (28.14%), Postives = 112/263 (42.59%), Query Frame = 1
Query:    4 WVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLRL--LTRQLTLNHVAHVPNLGQHNILSTKRLTQMFDTPMRVYPAAALIRPR-------RGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRG--LWNIMKFHQVLGHPAEQITRKTARMAGVQLSRIWQSCVHCSESRVRRYAVPKPTENRADRRTVRLFF-DLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNA 756
            W+ DSGA DH+T     L  H      D V+ A G+ L +  +G   L   +R L L +V HVP L  H +LS  RL    +  + ++P    ++ R       RG         +  NGL  +    H  +      PP+   L A      LW     HQ LGHP+  I     R   +  +    S V  S  R + + +P    N      + L   D+ GP  +T +GG ++ +  +DD++R+  +  LK KSD  +A
Sbjct:  322 WLLDSGANDHLTSDLDRLTTHERFSGKDTVQVANGSGLSISHFGQSLLPGSSRPLYLRNVLHVPGLSNH-LLSAHRLASDNNVFIELHPNFFCVKDRVTQKTLLRG---------KSHNGLYPVPCSPHSAS------PPSRLGLTAVMASTDLW-----HQRLGHPSFSIVSSVLRSNKLACAPSQSSSVCDSCQRAKIHQLPFYKSNHVSSSPLELVHSDVWGPA-ITSVGGFKYYVSFLDDYSRYTWIYLLKRKSDVEHA 562          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A0V1HEX2_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella zimbabwensis TaxID=268475 RepID=A0A0V1HEX2_9BILA)

HSP 1 Score: 75.9 bits (185), Expect = 4.040e-12
Identity = 67/259 (25.87%), Postives = 111/259 (42.86%), Query Frame = 1
Query:    4 WVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLRL---LTRQLTLNH---VAHVPNLGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLWNIMKFHQVLGHPAEQITRKTARMAGVQLSRIWQSCVHCSESRVRRYAV-PKPTENRADRRTVRLFFDLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNAL 759
            W+ DSGA+ HMT+    L D    P    V+   G  +PV G+G +     +  +  LN    V +VP LG +     K   + F+    V         R+ G       ++  NG+ E+ +R       C P+ P    ++     L     +H+ L H  ++  ++      +++    Q C  C   +  R     +    RA  + +    DL GP HVT LGG+++ ++  DDF+R+++V FLK K D    L
Sbjct:  151 WLADSGASQHMTRNKEYLADFVTFPQPVNVKIGNGDAIPVYGWGTVNFKVFIKGKWILNRMEVVWYVPKLGLNLFSIEKAAEKGFNFTANVDGCTF----RKNGR-VKLSGVRNVNGVYELHMRV------CTPEKPAYVHVSTADASL---QLWHERLCHQNKRHVQQVLNNHAIKVHAKEQFCTGCVFGKHHREGFHSRKYRPRAPGKLIHA--DLCGPMHVTSLGGSKYFLIFKDDFSRYRLVFFLKRKDDVAQCL 393          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A238FDN2_9BASI (BQ2448_2268 protein n=2 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FDN2_9BASI)

HSP 1 Score: 73.9 bits (180), Expect = 2.670e-11
Identity = 74/262 (28.24%), Postives = 111/262 (42.37%), Query Frame = 1
Query:   13 DSGATDHMTQGPAGLEDHTPAPAGDRVESAG--GTLLPVVGYGHLRLLT--RQLTLNHVAHVPNLGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLWNIMKFHQVLGHPAEQITRKTARMAGVQLS---------RIWQSCVHCSESRVRRYAVPKPTENRADRRTVRLFFDLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNAL 759
            DSGAT HMT     L D  P+PAG RV   G  G+     G G LR  T  + + L+ V HVP L    +     +   +D  +   P A  +   R  +   F+ L+ +  +LE        A  C P P   +AL        ++  +H  LGH        + R   + L          +  + CV C   +   +       +RA     R+F DL GP  V  L G+R++    D+++R++ +R L  KSDAT A+
Sbjct:  413 DSGATRHMTTRRDLLHDFQPSPAGRRVRVTGAFGSGGFASGTGSLRFSTNGKDMALSDVLHVPGLEAELVSLHCLIEDGYDIRVAPAPEARGLIVSRDNVDARFK-LRNKQFVLE--------ASPCAPSPLRDSALNVALLPSADLPLWHGRLGHGGVNAVLASGRAGSIGLDTAAVTPDSIQTVKDCVPCHLGKDVAHRSHAAATHRATAPFGRVFMDLWGPGPVVSLSGHRYLCGGTDEYSRYRWLRGLTAKSDATRAI 665          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A0V1APS7_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=25 Tax=Trichinella TaxID=6333 RepID=A0A0V1APS7_TRISP)

HSP 1 Score: 70.9 bits (172), Expect = 2.870e-10
Identity = 72/256 (28.12%), Postives = 105/256 (41.02%), Query Frame = 1
Query:    4 WVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLR--LLTRQLTLNH-VAHVPNLGQHNILSTKRL-----TQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTV-TALAATQRGLWNIMKFHQVLGHPAEQITRKTARMAGVQLSRIWQSCVHCSESRVRRYAVPKPTENRADRRTVRLFFDLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSD 744
            W  DSGAT H+T     +E++        V  A GT +   G G ++  L T++  + H V H P L   N+LS  R+     T +FD         A+  PR+             NGL  +  RC   A      P      L    RG   +++  Q  G P++ IT+                CV C + +  R   PK    R+      +  D+ GP  V  +GG R+ +  IDDF+R   V FLKHK++
Sbjct:  291 WFLDSGATTHLTHRDDWMEEYN-GHTTHTVAIANGTNITTKGCGVVKIPLATKKTMVAHDVRHAPELAL-NLLSVSRIAAQKKTLIFDENGCRIVDLAIEVPRQ----HILGTATQYNGLYRLN-RCDQWAMTVHDVPDLWHRRLGHLSRGSMKLLQDGQATGIPSDAITKT--------------DCVTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLKHKNE 525          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A540NPQ2_MALBA (gag_pre-integrs domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NPQ2_MALBA)

HSP 1 Score: 69.3 bits (168), Expect = 3.290e-10
Identity = 66/252 (26.19%), Postives = 107/252 (42.46%), Query Frame = 1
Query:    4 WVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVV--GYGHLRLLTRQLTLNHVAHVPNLGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLWNIMKFHQVLGHPAEQITRKTARMAGVQLSRIWQS--CVHCSESRVRRYAVPKPTENRADRRTVRLFF-DLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSD 744
            W+ DSGA+ HMT   A L++       ++V    G  LP++  G   L   T    L HV HVP L Q N++S  +        M +YP    ++    G   F  P+Q  +G          ++ +       +TA     + LW     HQ LGHP+ +I  K    + + +        C  C+  +  +  +P  +     R+ + L   D+ GP  +    G R+ ++ IDD+TR+     L+ KSD
Sbjct:   25 WIVDSGASSHMTNSYANLQNPEAYTGPEQVYIGDGKGLPILHSGSSSLHTSTNSFALKHVLHVPALKQ-NLISANQFLLDNSCFMHLYPFHFTVKDLSSGRMLFKGPVQ--HGFYPFH-----SSFSPANSSQALTAYVKAPQHLW-----HQRLGHPSVKIMNKLVSQSCISVLAASNKAFCSDCALGKCSK--LPFSSITCTTRKPLELIHTDVWGPSPILSHHGFRYYVIFIDDYTRYCWFYPLRCKSD 261          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A6A2ZK19_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZK19_HIBSY)

HSP 1 Score: 70.1 bits (170), Expect = 4.860e-10
Identity = 69/253 (27.27%), Postives = 111/253 (43.87%), Query Frame = 1
Query:    4 WVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLRLL--TRQLTLNHVAHVPNLGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLWNIMKFHQVLGHPAEQITRKTARMAGVQLSRI----WQSCVHCSESRVRRYAVPKPTENRADRRTVRLFFDLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSD 744
            W  D+GAT HMT   A L++  P     RV    GT +P+   G +  +  +  L L+ V  VPNL + N+LS   LT+  +  +    ++  I           +  + E GL  +  R H +  + L K    T+ A++       + +H  LGHP+ +I     +   + LS       + C  C   ++ R      ++ R      R++ DL GP  +T   G ++  + IDDF+RF     LK KSD
Sbjct:  180 WYTDTGATSHMTNDVAALDNSVPYTGNQRVYIGNGTSMPISRIGSISSIVTSHPLPLSDVLLVPNLTK-NLLSISNLTRENNCLITFSSSSFTIHDLATRTVVGVK--RCEKGLYVLD-RGHASFLSSLSK---CTSRASS-------VTWHPRLGHPSFRIVSSLNKHGAITLSHNNKIDSKPCFGCQLGKIHRLPFSN-SDQRCASLFERIYCDLWGPSPITSPSGYKYYCVLIDDFSRFSWFYPLKLKSD 417          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A0V0T3I0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V0T3I0_9BILA)

HSP 1 Score: 70.1 bits (170), Expect = 5.040e-10
Identity = 72/258 (27.91%), Postives = 106/258 (41.09%), Query Frame = 1
Query:    4 WVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLR--LLTRQLTLNH-VAHVPNLGQHNILSTKRL-----TQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTV--TALAATQRGLWNIMKFHQVLGHPAEQITRKTARMAGVQLSRIWQSCVHCSESRVRRYAVPKPTENRADRRTVRLFFDLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSDA 747
            W  DSGAT H+T     +E++        V  A GT +   G G ++  L T +  + H V H P L   N+LS  R+     T +FD         A+  PR+             NGL  +  R H      +   P +    L    RG   +++  Q  G P++ IT+                CV C + +  R   PK    R+      +  D+ GP  V  +GG R+ +  IDDF+R   V FLKHK++A
Sbjct:  291 WFLDSGATTHLTHRDDWMEEYNGCTT-HTVAIANGTNITTKGCGVVKIPLATEKTMVAHDVRHAPELAL-NLLSVSRIAAQKKTLIFDENGCRIVDLAIEVPRQ----HILGTATQYNGLYRLNRRDHWAM--AVQDVPDLWHRRLGHLSRGSMKLLQDGQGTGIPSDAITKT--------------DCVTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLKHKNEA 526          
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Match: A0A177TF14_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TF14_9BASI)

HSP 1 Score: 70.1 bits (170), Expect = 5.340e-10
Identity = 73/270 (27.04%), Postives = 124/270 (45.93%), Query Frame = 1
Query:    1 FWVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLRLLTRQ---LTLNHVAHVPN-LGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGMPFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLWNI----MKFHQVLGHPAEQITRKTARMAGVQ-LSRIWQS---CVHCSESRVRRYAVPK--PTENRADRRTVRLFFDLLGPFHV---TPLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNAL 759
            +++ D+ ++ H+      L D+ PAP G  +E A G ++ V GYG L+++T +   +TL  VAH P+ +G  N++  KRLT      +     +A +             +  ++  L MK    V   N + +  T+  +AA   G   I    +  H  L H  +++ +  A    +  L +I      C  C++ ++     P+  P E RA R    +  D+ GP  +     LGG R+ ++ +DDFT+   V+ L  KSDA  AL
Sbjct:  344 YFILDTASSRHIVANGNQLADYRPAPQGTGIECANGGMMAVEGYGTLKVITEEGTTITLLDVAHCPSTIG--NLIGGKRLTNS-GCKITFDDCSATV-------------INTKSDRLIMKA--DVRGGNWVVQLHTIPDIAAVLAGEPKIDSAAVHAHHALAHVNKKVLQAAAASGLIPGLPKILGQLGFCSACAQGKLASTPHPRLCPHE-RASRAMELIHADVFGPERMKEAAALGGYRYGLMLVDDFTKHVWVKLLHLKSDAVKAL 594          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58014.13275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A535S533_9CHLR4.960e-1630.92DDE-type integrase/transposase/recombinase (Fragme... [more]
A0A177VM55_9BASI2.410e-1226.67Integrase catalytic domain-containing protein n=1 ... [more]
UPI001652DC393.250e-1228.14uncharacterized protein LOC100279596 isoform X1 n=... [more]
A0A0V1HEX2_9BILA4.040e-1225.87Retrovirus-related Pol polyprotein from transposon... [more]
A0A238FDN2_9BASI2.670e-1128.24BQ2448_2268 protein n=2 Tax=Microbotryum intermedi... [more]
A0A0V1APS7_TRISP2.870e-1028.13Retrovirus-related Pol polyprotein from transposon... [more]
A0A540NPQ2_MALBA3.290e-1026.19gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6A2ZK19_HIBSY4.860e-1027.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A0V0T3I0_9BILA5.040e-1027.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A177TF14_9BASI5.340e-1027.04Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58014contigH-elongata_contig58014:257..1048 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score81.3
Seed ortholog evalue7.3e-13
Seed eggNOG ortholog6334.EFV48956
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BGB6@33208,3D5G4@33213,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930940.8807304-CDS-H-elongata_contig58014:256..8651622930940.8807304-CDS-H-elongata_contig58014:256..865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58014 257..865 -
1691679633.5353365-CDS-H-elongata_contig58014:256..8651691679633.5353365-CDS-H-elongata_contig58014:256..865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58014 257..865 -
1622930940.8978865-CDS-H-elongata_contig58014:898..10481622930940.8978865-CDS-H-elongata_contig58014:898..1048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58014 899..1048 -
1691679633.5481534-CDS-H-elongata_contig58014:898..10481691679633.5481534-CDS-H-elongata_contig58014:898..1048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58014 899..1048 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58014.13275.1prot_H-elongata_contig58014.13275.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig58014 257..1048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig58014.13275.1

>prot_H-elongata_contig58014.13275.1 ID=prot_H-elongata_contig58014.13275.1|Name=mRNA_H-elongata_contig58014.13275.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp
FWVNDSGATDHMTQGPAGLEDHTPAPAGDRVESAGGTLLPVVGYGHLRLL
TRQLTLNHVAHVPNLGQHNILSTKRLTQMFDTPMRVYPAAALIRPRRGGM
PFFFRPLQPENGLLEMKVRCHVTAKNCLPKPPTVTALAATQRGLWNIMKF
HQVLGHPAEQITRKTARMAGVQLSRIWQSCVHCSESRVRRYAVPKPTENR
ADRRTVRLFFDLLGPFHVTPLGGNRFVMLCIDDFTRFKMVRFLKHKSDAT
NAL
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mRNA from alignment at H-elongata_contig58014:257..1048-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig58014.13275.1 ID=mRNA_H-elongata_contig58014.13275.1|Name=mRNA_H-elongata_contig58014.13275.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=792bp|location=Sequence derived from alignment at H-elongata_contig58014:257..1048- (Himanthalia elongata Himel1 dioecious)
TTCTGGGTGAACGATAGCGGTGCGACAGATCATATGACACAAGGCCCGGC GGGTCTAGAGGATCACACGCCGGCACCCGCGGGAGATCGAGTGGAGAGCG CTGGTGGTACCCTCCTTCCGGTGGTGGGATATGGACATCTCCGCCTTCTG GTGGACCAAGGCAACGACAACTTCACCGACTAGACGCGCCAGCTCACGCT AAATCACGTCGCACATGTGCCGAATCTTGGACAGCATAATATTCTCTCTA CGAAACGGCTGACGCAGATGTTCGACACGCCGATGCGCGTCTACCCAGCA GCTGCATTGATCCGCCCCCGGCGAGGGGGCATGCCATTCTTTTTCCGCCC ACTTCAACCAGAAAACGGCCTTTTGGAGATGAAGGTGCGCTGCCACGTCA CTGCGAAGAACTGCCTACCCAAACCCCCAACAGTAACGGCGCTCGCGGCA ACGCAGCGCGGCCTGTGGAATATAATGAAGTTCCACCAGGTGCTGGGGCA CCCAGCAGAGCAAATCACCCGCAAAACGGCCCGTATGGCGGGCGTGCAAT TAAGTAGAATTTGGCAATCATGCGTACACTGCTCCGAATCTAGGGTGCGG CGATACGCCGTGCCTAAACCCACGGAAAATCGGGCTGACAGGCGTACGGT ACGGCTGTTTTTTGATCTGTTAGGCCCCTTTCACGTGACGCCTCTCGGAG GAAACAGATTCGTCATGCTGTGCATCGACGACTTCACCCGCTTCAAAATG GTTCGTTTCCTCAAGCACAAGAGCGATGCCACGAATGCGTTA
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Coding sequence (CDS) from alignment at H-elongata_contig58014:257..1048-

>mRNA_H-elongata_contig58014.13275.1 ID=mRNA_H-elongata_contig58014.13275.1|Name=mRNA_H-elongata_contig58014.13275.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1518bp|location=Sequence derived from alignment at H-elongata_contig58014:257..1048- (Himanthalia elongata Himel1 dioecious)
TTCTGGGTGAACGATAGCGGTGCGACAGATCATATGACACAAGGCCCGGC
GGGTCTAGAGGATCACACGCCGGCACCCGCGGGAGATCGAGTGGAGAGCG
CTGGTGGTACCCTCCTTCCGGTGGTGGGATATGGACATCTCCGCCTTCTG
TTCTGGGTGAACGATAGCGGTGCGACAGATCATATGACACAAGGCCCGGC
GGGTCTAGAGGATCACACGCCGGCACCCGCGGGAGATCGAGTGGAGAGCG
CTGGTGGTACCCTCCTTCCGGTGGTGGGATATGGACATCTCCGCCTTCTG
ACGCGCCAGCTCACGCTAAATCACGTCGCACATGTGCCGAATCTTGGACA
GCATAATATTCTCTCTACGAAACGGCTGACGCAGATGTTCGACACGCCGA
TGCGCGTCTACCCAGCAGCTGCATTGATCCGCCCCCGGCGAGGGGGCATG
CCATTCTTTTTCCGCCCACTTCAACCAGAAAACGGCCTTTTGGAGATGAA
GGTGCGCTGCCACGTCACTGCGAAGAACTGCCTACCCAAACCCCCAACAG
TAACGGCGCTCGCGGCAACGCAGCGCGGCCTGTGGAATATAATGAAGTTC
CACCAGGTGCTGGGGCACCCAGCAGAGCAAATCACCCGCAAAACGGCCCG
TATGGCGGGCGTGCAATTAAGTAGAATTTGGCAATCATGCGTACACTGCT
CCGAATCTAGGGTGCGGCGATACGCCGTGCCTAAACCCACGGAAAATCGG
GCTGACAGGCGTACGGTACGGCTGTTTTTTGATCTGTTAGGCCCCTTTCA
CGTGACGCCTCTCGGAGGAAACAGATTCGTCATGCTGTGCATCGACGACT
TCACCCGCTTCAAAATGGTTCGTTTCCTCAAGCACAAGAGCGATGCCACG
AATGCGTTAACGCGCCAGCTCACGCTAAATCACGTCGCACATGTGCCGAA
TCTTGGACAGCATAATATTCTCTCTACGAAACGGCTGACGCAGATGTTCG
ACACGCCGATGCGCGTCTACCCAGCAGCTGCATTGATCCGCCCCCGGCGA
GGGGGCATGCCATTCTTTTTCCGCCCACTTCAACCAGAAAACGGCCTTTT
GGAGATGAAGGTGCGCTGCCACGTCACTGCGAAGAACTGCCTACCCAAAC
CCCCAACAGTAACGGCGCTCGCGGCAACGCAGCGCGGCCTGTGGAATATA
ATGAAGTTCCACCAGGTGCTGGGGCACCCAGCAGAGCAAATCACCCGCAA
AACGGCCCGTATGGCGGGCGTGCAATTAAGTAGAATTTGGCAATCATGCG
TACACTGCTCCGAATCTAGGGTGCGGCGATACGCCGTGCCTAAACCCACG
GAAAATCGGGCTGACAGGCGTACGGTACGGCTGTTTTTTGATCTGTTAGG
CCCCTTTCACGTGACGCCTCTCGGAGGAAACAGATTCGTCATGCTGTGCA
TCGACGACTTCACCCGCTTCAAAATGGTTCGTTTCCTCAAGCACAAGAGC
GATGCCACGAATGCGTTA
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