prot_H-elongata_contig117010.1326.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117010.1326.1
Unique Nameprot_H-elongata_contig117010.1326.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
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BLAST of mRNA_H-elongata_contig117010.1326.1 vs. uniprot
Match: D8LTI1_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.960e-19
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0 
Query:    4 QAAGDIAGARALYHRALLVNHTSPEVLSNLGWLEEESGGGSRESLEKAAELYGRALEVFGMDSPSATRGQVEVNLANVRRRL 85
            Q AGDI GA+AL+HRAL +   SPE+L+NLGWLEE++GGGS+ SLE AA LY RA+ +  +D  S   G+VE NL++V+ RL
Sbjct:  304 QTAGDIPGAKALFHRALSLQPNSPELLNNLGWLEEQTGGGSKLSLETAAGLYERAIRL--LDERSPVLGRVEANLSSVQNRL 383
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117010.1326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTI1_ECTSI1.960e-1957.32TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..95
e-value: 1.3E-10
score: 43.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117010contigH-elongata_contig117010:326..619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117010.1326.1mRNA_H-elongata_contig117010.1326.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117010 326..619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117010.1326.1 ID=prot_H-elongata_contig117010.1326.1|Name=mRNA_H-elongata_contig117010.1326.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
KILQAAGDIAGARALYHRALLVNHTSPEVLSNLGWLEEESGGGSRESLEK
AAELYGRALEVFGMDSPSATRGQVEVNLANVRRRLGEIDEGGAVFYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf