prot_H-elongata_contig57842.13257.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57842.13257.1
Unique Nameprot_H-elongata_contig57842.13257.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length542
Homology
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: D8LBM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM9_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.030e-74
Identity = 214/625 (34.24%), Postives = 278/625 (44.48%), Query Frame = 0
Query:    7 NRLLVVNSTRLFSLRAGMGPMGDGYGLEHVPTMSMPKDTELVSCSIVPTRRS--MQPTTPLPLRTTAGMVCLAMISSTWDTPPPDLDATGGATSRSFVPSGNTPSTSTASATSAGPQPPVGGLLYVYPMRGEKRFEVERALQRKPQQLVLPFIPAGMTHATVWRG-ATPSNYVEMASSSSRYNYR------------------RIEQGDALLVWDRGGVVYGYTRWAEGLSDS---------------DKHRGNDANCGRALLTAESKESLARLIPELVSVGSPVLSLSTLAMDEGD--KGRWRHVMAGCVDGVYHSSF-DATNCRKETTFSFLNGPVPAVSFRPWPPLNFCGQCAANDAAAEREVVGFACGELGMMASLVKSEREKPRKIS--WAAASGTYVDCA----DEVTCLSCADFCRDGSSAVAIGTRNGKVTIYPSALPS-----AREISHETDAARVDAG---------FGAICWDDD---------------------DSVSEGPSPTSYCSERHNLSCDMIPS---------CAPTIHGQSSVKWQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQMLQPNRAVPVDDGSDY 542
            +RLLVVN T L  LRAG+GP G+ +GL  +P  S+P+  ++V+C++V TRR                                                                       LL VYP+ GE+  EV+RAL+R+PQQLVLP++P GM H TVWR  A   N+V                              R+E+GDA+LVWD+ G+V+GYTRW EG  D                       A    ++LTAES+ESL  L+PEL  + SPV  L+  A++EGD    R R V+AGC++     S  DA + R+ET  + + GPV AV+    P   F       D      V GFAC EL M+A LV+        +   W   S   V+      D+VTC+ CADF RDGS+AVAIGT  GKV +Y SA P+             +  RVDAG         FG     DD                     DSVS  PS  +  S         +                    + +WQ D+ H V  I  GDFNHDG+ E+VVATQ+G+HVFRPDYR E  R AKT+  L+MLQP      DDG D+
Sbjct:   25 SRLLVVNETGLLKLRAGLGPAGNRFGLGQLPVESLPEVAKVVACTVVRTRRGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNVYPLDGERGSEVDRALRREPQQLVLPYMPVGMAHTTVWRSVAALPNFVGGGXXXXXXXXXXXXXXXXXXXXXXXXXRVRVERGDAVLVWDQSGMVHGYTRW-EGGGDRRTXXXXXXXXXXXXXXTXXXXXATGHVSILTAESRESLETLMPELRGIDSPVSCLAFDAVEEGDGWARRRRRVLAGCMESARCVSLHDAASGRRETAVASVPGPVGAVALNARP--RFMPYDRHVDDRWGGNVAGFACTELDMLAWLVEGGNAAGAGVGGRWYTGSLPLVEAGGGGGDQVTCMECADFFRDGSTAVAIGTNLGKVIVY-SAEPNNGGGEGGLAGGLEEVGRVDAGGRSGGEGLVFGLEVDGDDSSEEDEAGCSSNPVQPPSRRGDSVSPRPSGLASSSADRQFHSRRVADRQGXXXXXXXXXXXRPLLTARWQRDLPHGVLRIAFGDFNHDGVRELVVATQYGVHVFRPDYRAEASRFAKTMHALKMLQPKE----DDGGDF 641          
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: UPI001C1CE0F7 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1CE0F7)

HSP 1 Score: 60.1 bits (144), Expect = 9.590e-7
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  472 WQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQML 528
            WQ   +HP++ I   D N DGIEE++VATQ+G+H+ +P+     ++L K LD +  L
Sbjct:  128 WQRSFTHPIYRIASLDLNEDGIEELIVATQYGVHILQPNLSKAKEQLLKVLDEIDNL 184          
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: A0A2D4C3S9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3S9_PYTIN)

HSP 1 Score: 61.2 bits (147), Expect = 2.980e-6
Identity = 77/302 (25.50%), Postives = 111/302 (36.75%), Query Frame = 0
Query:  237 SKESLARLIPELVSVGSPVLSLSTLAMDEGDKGRWRHVMAGCVDGVYHSSFDATNCRKETTFSFLNGPVPAVSFRPWPPLNFCGQCAAN--DAAAERE-----VVGFACGELGMMASLV-KSEREKPRKISWAAASGTYVDCADEVTCLSCADFCRDGSSAVAIGTRNGKVTIYPSALPSARE---ISHETDAARVDAGFGAICWDDDDSVSEGPSPTSYCSERHNLSCDMIPSCAPTIHGQSSVKWQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQM 527
            S E  + L PE      PVL +        D G    V  GC DG+         CR       L+GP     FR   P+       +   D +  R      +VG A G   +   +  +SE + P K    A S  Y    D V  +   D   DG   + +GT +  V  Y    P   +    S  T+   VDA           + +E   P+  C           P   PT     S  W       V+ ++  D NHDG++E+++A+  G++VF  D R    RL   L VL++
Sbjct:  243 SNEQFSSLFPEFAQFQHPVLCVDLSISPLRDVGC---VAFGCSDGLVRV------CRGSIHDGNLSGPFDTREFRLNGPITSVSLFGSRRLDVSQARSAPCHVLVGIAIGHARVYEDIFSRSEHDAP-KYERLAGSDQY----DSVLSVLAMDVDLDGEEELLVGTDDQVVLAYKKTQPRTEQKEPASDGTEDVPVDA-----------TSTESAEPSGNCRP---------PVSEPTWTLVKSPSWDVRAFGAVYSLLSLDVNHDGVDELLLASSTGVYVFECDARVVLARLEAMLRVLEV 510          
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: A0A2P4PDC6_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=A0A2P4PDC6_RHIID)

HSP 1 Score: 60.1 bits (144), Expect = 3.690e-6
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  472 WQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQML 528
            WQ   +HP++ I   D N DGIEE++VATQ+G+H+ +P+     ++L K LD +  L
Sbjct:  256 WQRSFTHPIYRIASLDLNEDGIEELIVATQYGVHILQPNLSKAKEQLLKVLDEIDNL 312          
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: A0A397SVU6_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SVU6_9GLOM)

HSP 1 Score: 60.1 bits (144), Expect = 5.110e-6
Identity = 58/269 (21.56%), Postives = 98/269 (36.43%), Query Frame = 0
Query:  261 LAMDEGDKGRWRHVMAGCVDGVYHSSFDATNCRKETTFSFLNGPVPAVSFRPWPPLNFCGQCAANDAAAEREVVGFACGELGMMASLVKSEREK-PRKISWAAASGTYVDCADEVTCLSCADFCRDGSSAVAIGTRNGKVTIYPSALPSAREISHETDAARVDAGFGAICWDDDDSVSEGPSPTSYCSERHNLSCDMIPSCAPTIHGQSSVKWQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQML 528
            L+++  + G  + + AGC +G+ H S    N   E+T  F         F P   ++      + D   E  ++     E  ++   V  E  K P  +   +         D V C    D   DG + + IGT   ++ IY   + S   I ++                                                      + WQ   +HP++ I   D N DGIEE++VATQ+G+H+ +P+     +RL K L+ + +L
Sbjct:  175 LSLEIKEFGNVKFIAAGCQNGMLHISILKQN---ESTGDFEREQSSVALFSPITSISIFASSTSKDKPEEIHMLVTCAVEQAIIYCYVDKEILKHPLYLRECSKH-------DSVLCSHIMDIDWDGKNEILIGTYGRELLIYKQNVNSQGMIIYQ------------------------------------------------------LLWQRSFTHPIYRITGLDLNEDGIEELIVATQYGVHILQPNLYKAKERLLKVLNEIDIL 379          
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: A0A015LUU7_RHIIW (Uncharacterized protein n=10 Tax=Rhizophagus TaxID=1129544 RepID=A0A015LUU7_RHIIW)

HSP 1 Score: 60.1 bits (144), Expect = 6.200e-6
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  472 WQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQML 528
            WQ   +HP++ I   D N DGIEE++VATQ+G+H+ +P+     ++L K LD +  L
Sbjct:  391 WQRSFTHPIYRIASLDLNEDGIEELIVATQYGVHILQPNLSKAKEQLLKVLDEIDNL 447          
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: A0A2Z6RY76_9GLOM (KICSTOR complex protein kaptin n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RY76_9GLOM)

HSP 1 Score: 59.3 bits (142), Expect = 1.080e-5
Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  472 WQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQML 528
            WQ   +HP++ I   D N DGIEE+++ATQ+G+H+ +P+     ++L K LD +  L
Sbjct:  388 WQRSFTHPIYRIASLDLNEDGIEELIIATQYGVHILQPNLSKAKEQLLKILDEIDNL 444          
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Match: A0A397VLN0_9GLOM (Uncharacterized protein n=7 Tax=Gigaspora TaxID=4873 RepID=A0A397VLN0_9GLOM)

HSP 1 Score: 58.5 bits (140), Expect = 1.840e-5
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 0
Query:  472 WQHDMSHPVWGIVLGDFNHDGIEEMVVATQFGLHVFRPDYRDEGKRLAKTLDVLQMLQ 529
            WQ   SHP++ I   D N DGIEE++VATQ G+H+ +P+       L K L+ L+ L+
Sbjct:  375 WQRSFSHPIYKIANLDLNQDGIEELIVATQHGIHILQPNLEKAKVELLKILEELKSLK 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57842.13257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LBM9_ECTSI1.030e-7434.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI001C1CE0F79.590e-742.11Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A2D4C3S9_PYTIN2.980e-625.50Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2P4PDC6_RHIID3.690e-642.11Uncharacterized protein n=1 Tax=Rhizophagus irregu... [more]
A0A397SVU6_9GLOM5.110e-621.56Uncharacterized protein n=1 Tax=Glomus cerebriform... [more]
A0A015LUU7_RHIIW6.200e-642.11Uncharacterized protein n=10 Tax=Rhizophagus TaxID... [more]
A0A2Z6RY76_9GLOM1.080e-540.35KICSTOR complex protein kaptin n=1 Tax=Rhizophagus... [more]
A0A397VLN0_9GLOM1.840e-543.10Uncharacterized protein n=7 Tax=Gigaspora TaxID=48... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57842contigH-elongata_contig57842:323..1948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57842.13257.1mRNA_H-elongata_contig57842.13257.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57842 323..1948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57842.13257.1 ID=prot_H-elongata_contig57842.13257.1|Name=mRNA_H-elongata_contig57842.13257.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=542bp
MSNLSPNRLLVVNSTRLFSLRAGMGPMGDGYGLEHVPTMSMPKDTELVSC
SIVPTRRSMQPTTPLPLRTTAGMVCLAMISSTWDTPPPDLDATGGATSRS
FVPSGNTPSTSTASATSAGPQPPVGGLLYVYPMRGEKRFEVERALQRKPQ
QLVLPFIPAGMTHATVWRGATPSNYVEMASSSSRYNYRRIEQGDALLVWD
RGGVVYGYTRWAEGLSDSDKHRGNDANCGRALLTAESKESLARLIPELVS
VGSPVLSLSTLAMDEGDKGRWRHVMAGCVDGVYHSSFDATNCRKETTFSF
LNGPVPAVSFRPWPPLNFCGQCAANDAAAEREVVGFACGELGMMASLVKS
EREKPRKISWAAASGTYVDCADEVTCLSCADFCRDGSSAVAIGTRNGKVT
IYPSALPSAREISHETDAARVDAGFGAICWDDDDSVSEGPSPTSYCSERH
NLSCDMIPSCAPTIHGQSSVKWQHDMSHPVWGIVLGDFNHDGIEEMVVAT
QFGLHVFRPDYRDEGKRLAKTLDVLQMLQPNRAVPVDDGSDY
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