prot_H-elongata_contig57841.13256.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57841.13256.1
Unique Nameprot_H-elongata_contig57841.13256.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length403
Homology
BLAST of mRNA_H-elongata_contig57841.13256.1 vs. uniprot
Match: D7FLH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH9_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 9.850e-98
Identity = 210/456 (46.05%), Postives = 260/456 (57.02%), Query Frame = 0
Query:    1 MNGKDAVDCSSRTVVATLTRALLGSWKGSVDTGRKLFDQSVLRNPNRSIPVGLGLEMLVQSLVQDDIDSYKLAKARRMVCEDSPSPFKN---------------------------EGEGSYEASSRSSTCPSRRRPDCCHIDEAAACVTIIGNYVRADADTAGSFFQDIIPTLLVLGVGGRDRGGRGXXXXXXGRLGNSERLPPRLVAVLRSLVDSTRRGMSRNSFNVERMIVHTVRGVKDWADPVEILPSPCLFSV------------HTSSTPEHRLLDGEGAGKFDVESPISTMVGKKAAASNKGISANEKHRRRGLILACLDILGPTQSCMALIRRVREMVEGEGKANLRSAVVEALLEYRRTCAASDVEAAQALMIGVLSDLTEDIFIGVRLSALAAVGEAF-------------SSDFVPAASFLLRRCLDTSPKVNR-HFQVSVDYFR 403
            MNG+D VDC  RTVVATLTRALL SW+GS   GR+LFDQSVL+ P+RS PVGLGLE+L+Q LVQDD D  +L  A     + +PS                               +   S+ A S          P+    DE  ACVTIIGNYVRAD DT+G+FF+D+IP +L++G+GG  RG          + G S R+P RL A+LRSLV +TR    RNSFN+ERMIVHTV+ VK W DP  +L S                    SS  +  ++ G  A      +       K    SN G   N+K RRRGL+LAC+DILG T SC++LIR+  EMVEGE KA+LRSAV + LLEYRRTC++SD    Q +++GVLS L  D  + VRLSALAA+GEA              SSD VPA S LL RCLD +PKV     ++ VD FR
Sbjct:    1 MNGRDTVDCGRRTVVATLTRALLRSWEGSTTVGRELFDQSVLKTPDRSGPVGLGLEVLLQCLVQDDGDFGQLEMAVEAEEDTAPSQASXXXXXXXXXXXXXXXXXXXXXXXXXXXADATASFAALS----------PE----DETRACVTIIGNYVRADPDTSGAFFRDVIPKVLLMGMGGGRRG----------QSGGSRRVPRRLAALLRSLVRTTR---CRNSFNMERMIVHTVKEVKAWGDPSVVLLSXXXXXXXXXXXXXXXXXXEVSSLGDDVVMGGT-ATVDRARARXXXXXKKDGRGSNAG---NDKLRRRGLVLACIDILGHTSSCLSLIRQ--EMVEGEAKASLRSAVADGLLEYRRTCSSSDTHGVQTVLLGVLSALALDGVVAVRLSALAAIGEALGPIKRFASVFQGCSSDCVPAVSLLLERCLDAAPKVRALALRLLVDEFR 423          
BLAST of mRNA_H-elongata_contig57841.13256.1 vs. uniprot
Match: A0A6H5KPL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL7_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 1.140e-96
Identity = 209/477 (43.82%), Postives = 258/477 (54.09%), Query Frame = 0
Query:    1 MNGKDAVDCSSRTVVATLTRALLGSWKGSVDT----------------------------------------------GRKLFDQSVLRNPNRSIPVGLGLEMLVQSLVQDDIDSYKLAKARRMVCEDSPSPFKNEGEGS----------------------YEASSRSSTCPSRRRPDCCHIDEAAACVTIIGNYVRADADTAGSFFQDIIPTLLVLGVGGRDRGGRGXXXXXXGRLGNSERLPPRLVAVLRSLVDSTRRGMSRNSFNVERMIVHTVRGVKDWADPVEILPSPCLFSVHTSSTPEHRLLDGEG-----AGKFDVESPISTMVGKKAAASNKGISANEKHRRRGLILACLDILGPTQSCMALIRRVREMVEGEGKANLRSAVVEALLEYRRTCAASDVEAAQALMIGVLSDLTEDIFIGVRLSALAAVGEAFSSDFVPAASFLLRRCLDTSPKVNR-HFQVSVDYFR 403
            MNG+D VDC  RTVVATLTRALLGSW+GS                                                 GR+LFDQSVL+NP+RS PVGLGLE+L+Q LVQDD    +   A     + +PS   +  EGS                         +S ++  P          DE  ACVTIIGNYVRAD DT+G+FF+D+IP +L++G+GG    GR       G+ G S R+PPRL A+LRSLV STR   SRNSFN+ERM+VHTV+ VK W DP  +L                  +   G      G   V+   +   GK         + N+K RRRGL+LAC DILG T SCM+LIR+  EMVEGE KA+LRSAV + LLEYRRTC++SD    Q +++GVLS L  D  + VRLSALAA+GE  SSD VP  S LL RCLD +PKV     ++ VD FR
Sbjct:   29 MNGRDTVDCGRRTVVATLTRALLGSWEGSATMQQNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSLPRTRVSRFQGRELFDQSVLKNPDRSGPVGLGLEVLLQCLVQDDGAFGQQDMAVEAGEDIAPSQASSSSEGSRXXXXXXXXXXXXXXXXXXXXXVATASFAALSPE---------DETRACVTIIGNYVRADPDTSGAFFRDVIPKVLLMGMGG----GR------QGQSGGSRRIPPRLAALLRSLVRSTR---SRNSFNMERMVVHTVKEVKAWGDPSVVLXXXXXXXXXXXXXXXXXDVSSLGDDVVMGGSATVDRARARNKGKGKKGGRASSAGNDKLRRRGLVLACTDILGHTSSCMSLIRQ--EMVEGEAKASLRSAVADGLLEYRRTCSSSDTHDVQTVLLGVLSSLALDGVVSVRLSALAAIGEGCSSDCVPGVSLLLERCLDAAPKVRALALRLLVDEFR 481          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57841.13256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLH9_ECTSI9.850e-9846.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPL7_9PHAE1.140e-9643.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57841contigH-elongata_contig57841:141..3217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57841.13256.1mRNA_H-elongata_contig57841.13256.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57841 141..3217 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57841.13256.1 ID=prot_H-elongata_contig57841.13256.1|Name=mRNA_H-elongata_contig57841.13256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=403bp
MNGKDAVDCSSRTVVATLTRALLGSWKGSVDTGRKLFDQSVLRNPNRSIP
VGLGLEMLVQSLVQDDIDSYKLAKARRMVCEDSPSPFKNEGEGSYEASSR
SSTCPSRRRPDCCHIDEAAACVTIIGNYVRADADTAGSFFQDIIPTLLVL
GVGGRDRGGRGRSRGERGRLGNSERLPPRLVAVLRSLVDSTRRGMSRNSF
NVERMIVHTVRGVKDWADPVEILPSPCLFSVHTSSTPEHRLLDGEGAGKF
DVESPISTMVGKKAAASNKGISANEKHRRRGLILACLDILGPTQSCMALI
RRVREMVEGEGKANLRSAVVEALLEYRRTCAASDVEAAQALMIGVLSDLT
EDIFIGVRLSALAAVGEAFSSDFVPAASFLLRRCLDTSPKVNRHFQVSVD
YFR
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