prot_H-elongata_contig5783.13252.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig5783.13252.1
Unique Name	prot_H-elongata_contig5783.13252.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	440

Homology

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BLAST of mRNA_H-elongata_contig5783.13252.1 vs. uniprot
Match: A0A6H5L3B9_9PHAE (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3B9_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 1.480e-123
Identity = 249/440 (56.59%), Postives = 317/440 (72.05%), Query Frame = 0

Query:    1 ASQRELSQANSTLSALQGALRDSQYEVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVGFKQSHEAHQRTAQRSHAFEREFENTRRTIDALRTEKTALKEQVDVGLEDRKALEAQLCQLQAGLTEGQEAARMEARKETERMETRLKEVMKERDRKNAELELQNARRKETREMARDLESQLAAVDRISQEREAELIKLREEIAGLRKDSGEATEKKNTWATKYDALERNFKQVRAQGKKAEAELEQMRHTIGRIEAEKTMLAERVEEEASERVTVVASIAHERDFLLRQASARMRRRSRVDLLEQEMTDLRRVEEAHATVAAARAQKTGVLEEYRSRAQQALKRANEVASQTTAENKQLEINMAKLSAEVARQRPLWEEAKQQEKLHLAELAELKSQLSIAVSNRENTGTQVASLEECLAREEEERSATLASVVRLEAQ 440
            A ++ELS   +  S L+GALR+S+ EV                               R+GF++S+ AHQRTA++SHA E E  N R  +++LR E  ALK +VD G+EDR ALE +L  LQAG+TEGQEAAR E R+E ER+E R+++++K+RDRK AEL+LQNARRKETREMARDLESQLAAV+RI+QERE EL K R+++  L+K++GEAT++K TWATKY+ALERNFKQVRAQ  + E+ELE+ R    RIEAEK +L ERVE E +ERVTVVAS++ ERDFLLRQA A       VD LEQE+ +LRR +EA AT AAARAQ TGVLEEYR+RAQQALKRANE+ SQT +ENK+L+  M KLS EVA+QRPLWE++KQ E++H AE+AELK +++   +   N     A+LE  +  +EEER     SV+RLEAQ
Sbjct:  326 AMRQELSLVKNAASGLEGALRESRSEVQ-------LLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYNARTLVESLRAESAALKAKVDEGVEDRHALEGKLRHLQAGVTEGQEAARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSIRIESELEEAREHATRIEAEKAVLEERVEVEGAERVTVVASVSQERDFLLRQAIA-------VDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLKAEMRKLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGNMAAAAAALEAQVLEKEEERRDAHTSVMRLEAQ 751

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig5783.13252.1 vs. uniprot

BLAST of mRNA_H-elongata_contig5783.13252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L3B9_9PHAE	1.480e-123	56.59	GRIP domain-containing protein n=2 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 224..258
None	No IPR available	COILS	Coil	Coil	coord: 76..103
None	No IPR available	COILS	Coil	Coil	coord: 27..54
None	No IPR available	COILS	Coil	Coil	coord: 406..440
None	No IPR available	COILS	Coil	Coil	coord: 332..370
None	No IPR available	COILS	Coil	Coil	coord: 133..181
None	No IPR available	COILS	Coil	Coil	coord: 189..216

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig5783	contig	H-elongata_contig5783:137..3180 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig5783.13252.1	mRNA_H-elongata_contig5783.13252.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig5783 137..3180 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig5783.13252.1 ID=prot_H-elongata_contig5783.13252.1|Name=mRNA_H-elongata_contig5783.13252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=440bp
ASQRELSQANSTLSALQGALRDSQYEVARLRDIVSTQENKMRRQEENIAH
LSDEISTARVGFKQSHEAHQRTAQRSHAFEREFENTRRTIDALRTEKTAL
KEQVDVGLEDRKALEAQLCQLQAGLTEGQEAARMEARKETERMETRLKEV
MKERDRKNAELELQNARRKETREMARDLESQLAAVDRISQEREAELIKLR
EEIAGLRKDSGEATEKKNTWATKYDALERNFKQVRAQGKKAEAELEQMRH
TIGRIEAEKTMLAERVEEEASERVTVVASIAHERDFLLRQASARMRRRSR
VDLLEQEMTDLRRVEEAHATVAAARAQKTGVLEEYRSRAQQALKRANEVA
SQTTAENKQLEINMAKLSAEVARQRPLWEEAKQQEKLHLAELAELKSQLS
IAVSNRENTGTQVASLEECLAREEEERSATLASVVRLEAQ