prot_H-elongata_contig57779.13247.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57779.13247.1
Unique Nameprot_H-elongata_contig57779.13247.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length145
Homology
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.340e-36
Identity = 73/134 (54.48%), Postives = 101/134 (75.37%), Query Frame = 0
Query:    4 VEDSQEDK-DPELIGCPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYREDALVLLNFVLDLLRFTAWESGNLRDFEDETTFDDP 136
            V +++ED+ DP L+ CP+Y +  LA+QAQ+V++ YNY+LDP+IRSA+SL L  A+V++DEAHNVEGVCRDAGS+E+S++D   +A DLC   Q TA    A +LL FV+ LL FT+ ES  L  FE+ET F++P
Sbjct:  326 VSETKEDQADPHLLACPYYLSMALAKQAQIVLMPYNYILDPSIRSAMSLALEGAVVILDEAHNVEGVCRDAGSLEVSLLDMVAMASDLCDCSQLTACSLGANLLLEFVMKLLYFTSRESLTLEAFENETNFEEP 459          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 4.780e-30
Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 0
Query:   26 LAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYREDALVLLNFVLDLLRFTAWESGNLRDFEDETTFDDP 136
            LA+QAQ+V++ YNY+LDP++RSA+SL L  A+V++DEAHNVEGVCRDAGS+E+S++D   +A DLC   Q TA    A +LL FV+ LL FT+ ES  L  FE+ET F++P
Sbjct:    3 LAKQAQIVLMPYNYILDPSVRSAMSLALEGAVVILDEAHNVEGVCRDAGSLEVSLLDMVAMASDLCDCSQLTACSLGANLLLKFVMKLLYFTSKESRTLEAFENETDFEEP 113          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: R0MF66_NOSB1 (DNA helicase n=2 Tax=Nosema bombycis (strain CQ1 / CVCC 102059) TaxID=578461 RepID=R0MF66_NOSB1)

HSP 1 Score: 90.9 bits (224), Expect = 1.730e-18
Identity = 46/129 (35.66%), Postives = 81/129 (62.79%), Query Frame = 0
Query:   17 GCPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYREDALVLLNFVLDLLRFTAWESGNLRDFEDETTFDDPLGLLEGEEV 145
            GCP++++  L ++A ++   YNY+LD N+R   +LDL++++V+IDEAHNV+ VCR +GS EL       I  DL    ++ A+ ED  + L  +LDL +     +  ++DF  +T+F+  + + +G+E+
Sbjct:  186 GCPYFASRKLNEKADIIFAPYNYLLDTNVRENTNLDLSNSVVIIDEAHNVDDVCRSSGSFELGNKLIEIICNDLISAIKKAAFFEDVKLDLLNILDLFKKFIEHAPKIKDFN-KTSFNGKMRIKKGKEI 313          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: A0A0Q3LFA9_BRADI (Helicase ATP-binding domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3LFA9_BRADI)

HSP 1 Score: 86.3 bits (212), Expect = 7.600e-17
Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 0
Query:   17 GCPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYREDALVLLNFVLDLLRFTAWESGNLRDFEDETTFDDPLGLLEGE 143
            GCP+++   +A+ AQLV   YNY++ P +R A+ +D++ +IV++DEAHN+E + RDAGSV++       +A +L +L    A  +    L   +  L+ +   + GNLRD E    F+ P     GE
Sbjct:  241 GCPYFAAQTMAETAQLVFCPYNYLISPIVRRAMDIDISGSIVILDEAHNIEDIARDAGSVDVDEESLTTLAGELANLATNEAVAKIYQPLHEVIEGLINWITDQVGNLRDNE----FEHPASFWTGE 363          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: A0A7S0B927_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0B927_9DINO)

HSP 1 Score: 84.0 bits (206), Expect = 2.450e-16
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0
Query:   18 CPFYSNHVLAQQAQLVIVTYNYVLDPNIR-SAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCH 92
            CP+Y+ H LAQQA LV   Y+YVLDP++R +A +LDL   +V++DEAHNVEGVCR+AGS E S+     +   L H
Sbjct:   71 CPYYTAHSLAQQADLVFCPYSYVLDPSVRRTAGALDLQGCVVILDEAHNVEGVCREAGSAEFSLDQMRAVIAGLQH 146          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: UPI0010FB8D30 (Fanconi anemia group J protein homolog n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB8D30)

HSP 1 Score: 84.3 bits (207), Expect = 3.340e-16
Identity = 45/135 (33.33%), Postives = 80/135 (59.26%), Query Frame = 0
Query:   17 GCPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYREDALVLLNF------VLDLLRFTAWESGNLRDFEDETTFDDPLGLLEGEEV 145
            GCP+Y++  LA +A ++   YNY++DP IR ++ +DL +AIV+IDEAHN+E  CR AGS+EL+     N  +D+      +A R+  + + +       +LD+++         R+F D+  FD  + + +G+++
Sbjct:  182 GCPYYASRSLADKADIIFAPYNYLIDPRIRESMGIDLKNAIVIIDEAHNIEDFCRSAGSLELN-----NRILDIIQNEVLSALRKGGISVFDIRGDITTILDVIKMFKEYGEEKREF-DKINFDTKIRVRKGKQI 310          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: A0A835GKE5_SPOEX (DNA helicase n=1 Tax=Spodoptera exigua TaxID=7107 RepID=A0A835GKE5_SPOEX)

HSP 1 Score: 84.3 bits (207), Expect = 3.390e-16
Identity = 35/85 (41.18%), Postives = 58/85 (68.24%), Query Frame = 0
Query:   18 CPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYRED 102
            CP+Y    +A+ + +V   YNY++DP+IRS++S+DL  A+V+IDEAHN+EG+CRD  SV+++ +   N  ++L  + Q     +D
Sbjct:  220 CPYYGARAMAKTSHIVFCPYNYLIDPSIRSSLSIDLKGAVVIIDEAHNIEGICRDVASVDITQLQIQNAIVELEKVSQYRVANQD 304          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: A0A7N0UP03_KALFE (Helicase ATP-binding domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UP03_KALFE)

HSP 1 Score: 83.6 bits (205), Expect = 6.620e-16
Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 0
Query:   17 GCPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLC 94
            GCP+Y++  +A  AQLV   YNY+++P IR+A+ +D+N A+V++DEAHN+E V RDAGSV+L       +  +L +LC
Sbjct:  254 GCPYYASRSMADDAQLVFCPYNYIINPVIRAAMEVDINGAVVILDEAHNIEDVARDAGSVDLEEDALDKLQTELQNLC 331          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: A0A2H1VWR6_SPOFR (DNA helicase n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VWR6_SPOFR)

HSP 1 Score: 83.2 bits (204), Expect = 8.490e-16
Identity = 38/97 (39.18%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   18 CPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYREDALVLLNFVLDLL 114
            CP+Y    +A+ A +V   YNY++DP+IRS++S+DL  A+V+IDEAHN+EG+CRD  SV+++ +   N   +L  + Q     +D    ++ +L+ L
Sbjct:  134 CPYYGARAMAKTAHIVFCPYNYLIDPSIRSSLSIDLTGAVVIIDEAHNIEGICRDVASVDITQLQIQNAIKELETVSQYRFANQDVEYYIDGLLNTL 230          
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Match: A0A2H1VVE1_SPOFR (DNA helicase (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VVE1_SPOFR)

HSP 1 Score: 83.2 bits (204), Expect = 8.590e-16
Identity = 38/97 (39.18%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   18 CPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVSLDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYREDALVLLNFVLDLL 114
            CP+Y    +A+ A +V   YNY++DP+IRS++S+DL  A+V+IDEAHN+EG+CRD  SV+++ +   N   +L  + Q     +D    ++ +L+ L
Sbjct:  206 CPYYGARAMAKTAHIVFCPYNYLIDPSIRSSLSIDLTGAVVIIDEAHNIEGICRDVASVDITQLQIQNAIKELETVSQYRFANQDVEYYIDGLLNTL 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57779.13247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZN2_9PHAE4.340e-3654.48Helicase ATP-binding domain-containing protein n=1... [more]
D8LEJ0_ECTSI4.780e-3056.76Helicase ATP-binding domain-containing protein n=1... [more]
R0MF66_NOSB11.730e-1835.66DNA helicase n=2 Tax=Nosema bombycis (strain CQ1 /... [more]
A0A0Q3LFA9_BRADI7.600e-1735.43Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S0B927_9DINO2.450e-1653.95Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
UPI0010FB8D303.340e-1633.33Fanconi anemia group J protein homolog n=1 Tax=Nyl... [more]
A0A835GKE5_SPOEX3.390e-1641.18DNA helicase n=1 Tax=Spodoptera exigua TaxID=7107 ... [more]
A0A7N0UP03_KALFE6.620e-1647.44Helicase ATP-binding domain-containing protein n=2... [more]
A0A2H1VWR6_SPOFR8.490e-1639.18DNA helicase n=1 Tax=Spodoptera frugiperda TaxID=7... [more]
A0A2H1VVE1_SPOFR8.590e-1639.18DNA helicase (Fragment) n=1 Tax=Spodoptera frugipe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..111
e-value: 1.1E-20
score: 75.9
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 16..97
NoneNo IPR availablePANTHERPTHR11472:SF47FANCONI ANEMIA GROUP J PROTEINcoord: 16..97
IPR010614DEAD2PFAMPF06733DEAD_2coord: 17..80
e-value: 3.4E-20
score: 72.4
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 1..118
score: 12.268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57779contigH-elongata_contig57779:284..2107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57779.13247.1mRNA_H-elongata_contig57779.13247.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57779 284..2107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57779.13247.1 ID=prot_H-elongata_contig57779.13247.1|Name=mRNA_H-elongata_contig57779.13247.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
SGEVEDSQEDKDPELIGCPFYSNHVLAQQAQLVIVTYNYVLDPNIRSAVS
LDLNDAIVVIDEAHNVEGVCRDAGSVELSVVDTANIAIDLCHLCQRTAYR
EDALVLLNFVLDLLRFTAWESGNLRDFEDETTFDDPLGLLEGEEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010614DEAD_2
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3