prot_H-elongata_contig116964.1324.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116964.1324.1
Unique Nameprot_H-elongata_contig116964.1324.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length259
Homology
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BLAST of mRNA_H-elongata_contig116964.1324.1 vs. uniprot
Match: A0A6H5KCA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA4_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 3.840e-55
Identity = 108/218 (49.54%), Postives = 134/218 (61.47%), Query Frame = 0 
Query:   44 PPTAARFRFVRGGTPGDSATVPMTRDAVHESMMDIYLDRREELGGGGSGDLGSPKDIGDLLFLARSSQPGSIGHELQRRGLRFFPKEAFVDAGWGEDLSPSAAAEEARYSWGAGTPLPREIPMSDLELLRDEEGRVRLVLWDPCGPDHPLIRAVEGEPRDGATVEVLNFPPRGKKRGEEGG----------SIADGHEFDELRSAVVFKRWFNVEQQE 251
            P +  RFR +RGG P D+A    T +A    ++++ LDR +     G G   +P+D+ + LFL RSSQPGSIG +LQRRG+R FP+EAF DA             EA   W  G PLP + PM+  EL RD EGRVRLVLWDPCGPDHPL+RAV  EP   A+VEVLNF   G +R  +GG          S   G +FDE RSAVVF++WF VEQQ+
Sbjct:   98 PASVVRFRVLRGGNPRDNAAAA-TPEA---DLVEVSLDRPDS----GGGMANNPQDLREFLFLVRSSQPGSIGEDLQRRGVRVFPEEAFADA-------------EAEVGWAGGRPLPLDTPMT--ELPRDGEGRVRLVLWDPCGPDHPLVRAVSVEPSKDASVEVLNFLLPGDRRRHDGGEGTAGDGGGCSSGYGRDFDESRSAVVFRKWFTVEQQQ 292
[Close]
BLAST of mRNA_H-elongata_contig116964.1324.1 vs. uniprot
Match: D7FS11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS11_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.540e-49
Identity = 107/228 (46.93%), Postives = 135/228 (59.21%), Query Frame = 0 
Query:   44 PPTAARFRFVRGGTPGDSATVPMTRDAVHESMMDIYLDRREELGGGGSGDLGSPKDIGDLLFLARSSQPGSIGHELQRRGLRFFPKEAFVDA----GWGEDLSPSAA----AEE--ARYSWGAGTPLPREIPMSDLELLRDEEGRVRLVLWDPCGPDHPLIRAVEGEPRDGATVEVLNFP-PRGKKR---GE----EGGSIADGH--EFDELRSAVVFKRWFNVEQQE 251
            P +  RFR +RGG P D+A            ++++ LDR +     G G   +P+D+ + LFL RSSQPGSIG +LQRRG+R FP+EAF DA    G G             EE  +   W  G PLP + PM+  EL RD EGRVRLVLWDPCGP HPL+RAV  EP   A+V VLNF  P   +R   GE    EGG  + G+  +F+E RSAVVF++WF VEQQ+
Sbjct:   80 PASVVRFRVLRGGNPRDNAAAXXXAATPEADLVEVSLDRPDS----GGGMANNPQDLREFLFLVRSSQPGSIGEDLQRRGVRVFPEEAFADAEAELGAGXXXXXXXXXXXXGEEGLSGVGWTGGRPLPLDTPMT--ELPRDGEGRVRLVLWDPCGPTHPLVRAVSVEPSKDASVMVLNFLLPEDSRRHDGGEGTAGEGGGCSSGYGSDFNESRSAVVFRKWFTVEQQQ 301
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116964.1324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCA4_9PHAE3.840e-5549.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS11_ECTSI1.540e-4946.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116964contigH-elongata_contig116964:23..1012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116964.1324.1mRNA_H-elongata_contig116964.1324.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116964 23..1012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116964.1324.1 ID=prot_H-elongata_contig116964.1324.1|Name=mRNA_H-elongata_contig116964.1324.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=259bp
MDRGGYDSKRHENNMHGISANNDCNSELASSDPTLAPKIPFIQPPTAARF
RFVRGGTPGDSATVPMTRDAVHESMMDIYLDRREELGGGGSGDLGSPKDI
GDLLFLARSSQPGSIGHELQRRGLRFFPKEAFVDAGWGEDLSPSAAAEEA
RYSWGAGTPLPREIPMSDLELLRDEEGRVRLVLWDPCGPDHPLIRAVEGE
PRDGATVEVLNFPPRGKKRGEEGGSIADGHEFDELRSAVVFKRWFNVEQQ
EARGSRHA*
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