prot_H-elongata_contig57718.13239.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57718.13239.1
Unique Nameprot_H-elongata_contig57718.13239.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig57718.13239.1 vs. uniprot
Match: D7FXM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM5_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.340e-26
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0 
Query:   18 AISNLQRAWVKLAPSTLEGVGVFALRDIPEGVDVLRWDWQRYESVFIPEEQLRASVPQEVFDQLR 82
            AISNLQ A+V+LAPS+LEGVGVFA+RDI EGV+V+RWDW +Y SVFIP E+LR  VP+EVFDQLR
Sbjct:   18 AISNLQSAYVRLAPSSLEGVGVFAMRDIAEGVEVMRWDWHKYASVFIPGEELRERVPKEVFDQLR 82
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57718.13239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXM5_ECTSI1.340e-2675.38SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57718contigH-elongata_contig57718:663..1994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57718.13239.1mRNA_H-elongata_contig57718.13239.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57718 414..2646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57718.13239.1 ID=prot_H-elongata_contig57718.13239.1|Name=mRNA_H-elongata_contig57718.13239.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MGASWSSSGVARDKESVAISNLQRAWVKLAPSTLEGVGVFALRDIPEGVD
VLRWDWQRYESVFIPEEQLRASVPQEVFDQLR*
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