prot_H-elongata_contig57528.13224.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57528.13224.1
Unique Nameprot_H-elongata_contig57528.13224.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length242
Homology
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 129 bits (324), Expect = 1.770e-30
Identity = 71/220 (32.27%), Postives = 121/220 (55.00%), Query Frame = 0
Query:    3 EAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 221
            +A+ S EW   +  +  E    +  G W++ E  + + ++G+R VF +K+D+  +V +YK RLVAQGF Q+ G+ Y ++ SP     ++    ++     WE RQ+D+  AY   ++EE I++E PE + D   +V +LK  +YGL  AG +W+K    +L   GF R  ADPCV+     G + + + V +DD+++   ++   +  V  L   F +KD
Sbjct:  860 QARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITI-LTVWVDDIILCGDSESRIDTTVSALKKIFEVKD 1078          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI)

HSP 1 Score: 127 bits (319), Expect = 8.090e-30
Identity = 72/238 (30.25%), Postives = 129/238 (54.20%), Query Frame = 0
Query:    3 EAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDS----RKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLRITWDATSRG 235
            EA+  S+W +  + +  +MD  +    W +V+ P G+  +G+R V+K K D++ + +++K RLVAQGF QV G+ Y E+ +P     S+ ++ ++    GW   Q+DV  AY   D+EE +Y+  P  Y       +  V +L+  +YGL  +G  W+  F  +L A+G+ + +++PCV+ R   G + + ++  +DD+L+ + T+ +              K+W  LR T+D T  G
Sbjct:  737 EARRRSDWEKWNKAMDEQMDALVGMHTWDLVQLPPGRKAIGSRWVYKLKLDEEGKADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKGGSRRKNMVCKLRLPLYGLKQSGRQWNTKFHDKLIARGYTQCKSEPCVYVRRKGGSISIALI-YVDDVLIVAPTEAEVNVE----------KEW--LRATFDVTDGG 961          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 126 bits (317), Expect = 1.530e-29
Identity = 81/218 (37.16%), Postives = 124/218 (56.88%), Query Frame = 0
Query:    7 SSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRIL--HGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 221
            ++EW   ++    E++     GV++ V RP+ + ++G++ VFK K   D +VEKYK RLVAQGF QV+GI Y+E+ +P     SI ++ ++     WE  Q+DV  A+   ++EE IY+++P  ++ S   V +LKKA+YGL  A   W K    EL+  GF R QAD CVF + +  H  +   I V +DD +V S +     +   DL S F + D
Sbjct: 1007 AAEW---RKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPI---IAVYVDDNMVLSDSLDLVTKTKSDLGSRFDMTD 1218          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A177T1Q9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Tilletia TaxID=13289 RepID=A0A177T1Q9_9BASI)

HSP 1 Score: 125 bits (315), Expect = 2.280e-29
Identity = 76/237 (32.07%), Postives = 130/237 (54.85%), Query Frame = 0
Query:    1 MGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVE-EIYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCF------PIKDWRRLRITWD 230
            +GEA A  +WP+    + +E+     RG W++V+ P+G  ++ ++ V + K + D  ++KYK RLVA+GF Q+ G+ YDE+ +PT     + +  S+  AL  E  Q+D + AY  A ++ +IY+ +PE       +V +L+ A+YGL  +G  W       L + GFQ+ + DP +F R  +G    +++V +DD++VA+    D E   R+L   F      P+     +R+T D
Sbjct:  207 VGEAMARPDWPEWDAAMRKELQSHAERGTWEMVKVPEGVNLVTSKWVLRIKRNADATIQKYKGRLVARGFTQIHGVDYDETFAPTSRLQILRLFCSLSAALDLELHQIDFETAYLNAKLKHDIYMAVPEGVEALPDEVLKLRLALYGLKQSGHDWHVALRDALGSIGFQQCEFDPTIFVR--NGERAAMLLVYVDDIIVATPQGEDIEGVKRELLGLFKGTDLGPVHHVLGIRVTRD 441          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI)

HSP 1 Score: 125 bits (314), Expect = 3.700e-29
Identity = 74/237 (31.22%), Postives = 130/237 (54.85%), Query Frame = 0
Query:    3 EAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRD---SRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLRITWDATSRG 235
            EA+   +W +  + +  +M+  +    W +VE P G+  +G+R V+K K ++D   +++K RLVAQGF QV G+ Y E+ +P     S+ ++ ++    GW   Q+DV  AY   D+EE +Y+  P  Y     +R  V +L+  +YGL  +G  W+  F  +L  +G+ + +++PCV+ R + G + + ++  +DD+L+ + T  + E AV         KDW  L+ T+D T  G
Sbjct:  638 EARKRRDWDKWSKAMDEQMNALVGMHTWDLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKKGPNRNLVCRLRLPLYGLKQSGRQWNTKFHKQLIKRGYVQCKSEPCVYVRRIGGSIRIALI-YVDDVLIVAPT--EAEVAVE--------KDW--LKATFDVTDGG 861          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 124 bits (310), Expect = 1.240e-28
Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 0
Query:    7 SSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEEIYVELPEAY--RDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRIL---HGVVVVVIVVNIDDLLVAS 200
            S+EW   K+    E +  I    W++V  PKGK V+G++ VFK K D++  V++YK RLVAQG+ Q +G+ Y E  SP     +I  + ++  A  WE  Q+DV  A+ + ++EEIY+  P+ Y  ++    V +LKK++YGL  +   W+      L++ G+++ ++DPC++ + +   +GV+++ I  ++DD+L+ S
Sbjct:  735 SAEW---KQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSI--HVDDILLFS 928          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 5.760e-28
Identity = 69/211 (32.70%), Postives = 123/211 (58.29%), Query Frame = 0
Query:   13 LKRTIAREMDGQIARGVWQVVE-RPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADV-EEIYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 221
            L++ +  E +G +  G +  V+  P+G+  + ++  F  K +K+ +++ +K RLVA+GF Q+  + Y  SSSP P+ ASI ++ ++    G      DV  AY  A + EE++++LP    D   ++ + ++A+YGL  +G  W       L   GF++ +ADPCVF +++  VVV++IV+ +DD+LVA + + D E+ +  L   FP K+
Sbjct:  552 LEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKN 761          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 7.260e-28
Identity = 71/214 (33.18%), Postives = 122/214 (57.01%), Query Frame = 0
Query:   10 WPQLKRTIAREMDGQIARGVWQVVE-RPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADV-EEIYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKD 221
            W Q  R    E +G +  G +  V+  P+G+  + ++  F  K +K+ +++ +K RLVA+GF Q+  + Y  SSSP P+ ASI ++ ++    G      DV  AY  A + EE++++LP    D   ++ + ++A+YGL  +G  W       L   GF++ +ADPCVF +++  VVV++IV+ +DD+LVA + + D E+ +  L   FP K+
Sbjct:  306 WEQAMRE---EFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKN 515          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI)

HSP 1 Score: 121 bits (303), Expect = 1.080e-27
Identity = 68/228 (29.82%), Postives = 124/228 (54.39%), Query Frame = 0
Query:    3 EAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADVEE-IYVELPEAYRD---SRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLR 226
            EA+   +W +    +  +M+  +    W +VE P G+  +G+R V+K K ++D   +++K RLVAQGF QV G+ Y E+ +P     S+ ++ ++    GW   Q+DV  AY   D+EE +Y+  P  Y     ++  V +L+  +YGL  +G  W+  F  +L  +G+ + +++PCV+ R   G + + ++  +DD+L+ + T+ +     + L S F + D   LR
Sbjct:  639 EAKRRRDWDKWSTAMDEQMNALVGMHTWDLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKGGPNKNLVCRLRLPLYGLKQSGRQWNTKFHKQLVKRGYVQCKSEPCVYVRRTGGSIRIALI-YVDDVLIVAPTEAEVAIEKKWLKSTFDVTDGGPLR 865          
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 119 bits (298), Expect = 1.620e-27
Identity = 78/216 (36.11%), Postives = 120/216 (55.56%), Query Frame = 0
Query:   12 QLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKRKFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGALGWEARQLDVDIAYPEADV-EEIYVELPEAYRDSRKQVGQLKKAMYGLVHAGLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVASATKRDEEQAVRDLCSCFPIKDWRRLR 226
            Q K   A+EM   +   ++  VE PK + V+G++ VF+ K   + ++EKYK RLVAQGF QVKGI Y E+ +P     SI  + S+   L  E  Q+DV  A+   D+ EEIY++ P  +      V +LKK++Y L  A   W K    E EA GF R +AD  VF +  +G +++V  V ++D+L+ S + +  +Q   +L  C+ + D   +R
Sbjct:    8 QWKIACAQEMLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLDLEIHQMDVKSAFLNGDLDEEIYMKCPPGHHAKEGIVWKLKKSLYELKQASCEWYKKVREEFEALGFTRSEADHSVFYKNENGALMIV-AVYVNDMLLFSNSMKGIDQLKAELKDCYEMTDLGEVR 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57528.13224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3AKI0_9AGAM1.770e-3032.27Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A177U1E5_9BASI8.090e-3030.25Integrase catalytic domain-containing protein n=2 ... [more]
A0A0C2WN23_AMAMK1.530e-2937.16Integrase catalytic domain-containing protein (Fra... [more]
A0A177T1Q9_9BASI2.280e-2932.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177TL22_9BASI3.700e-2931.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A7D9HXK4_PARCT1.240e-2834.17Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6H5JTV6_9PHAE5.760e-2832.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE7.260e-2833.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177U0N4_9BASI1.080e-2729.82Integrase catalytic domain-containing protein n=2 ... [more]
A0A2R6NNP3_9APHY1.620e-2736.11Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..222
e-value: 1.2E-35
score: 123.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 4..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57528contigH-elongata_contig57528:695..1420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57528.13224.1mRNA_H-elongata_contig57528.13224.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57528 7..1441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57528.13224.1 ID=prot_H-elongata_contig57528.13224.1|Name=mRNA_H-elongata_contig57528.13224.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp
MGEAQASSEWPQLKRTIAREMDGQIARGVWQVVERPKGKTVLGARVVFKR
KFDKDERVEKYKCRLVAQGFRQVKGIHYDESSSPTPAQASITIVPSMIGA
LGWEARQLDVDIAYPEADVEEIYVELPEAYRDSRKQVGQLKKAMYGLVHA
GLLWSKTFGIELEAKGFQRYQADPCVFPRILHGVVVVVIVVNIDDLLVAS
ATKRDEEQAVRDLCSCFPIKDWRRLRITWDATSRGTGTLGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2