mRNA_H-elongata_contig5749.13219.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5749.13219.1
Unique NamemRNA_H-elongata_contig5749.13219.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A6H5KJ22_9PHAE (BED-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ22_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 2.200e-53
Identity = 138/242 (57.02%), Postives = 154/242 (63.64%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAKKARTSEASTVDSSSTVR-----EIPAADVIVPLQQPPAPVQGQAVQQQYGGTHQQHAPGVVY---APPPISGIGFPPMLQPGF-PGMMVGPXXXXXXXXXXXXXXXXXX--------FSGPHVPNGQLLGRPVGPIPGGYP 675
            MGKKKK    KDE EAWCYYCDRVFEHEEVLI HQK KH  C  C KKLSTAGGLVVH  QVH+ET+S VPNAKEGR+SVD EIYGINGIP +A AERAAKKAR +  +              E P  +   P QQP     GQ +  Q+ G   Q  PG+++   AP P  G+GF PM QPGF PGMM GPXXXXXXXXXXXX                GP  PNGQ+LG   GP+ GG+P
Sbjct:    1 MGKKKKQKVAKDETEAWCYYCDRVFEHEEVLILHQKTKHLSCMFCKKKLSTAGGLVVHAQQVHRETISEVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNGXXXXXXXXXXXXPETPKVETATPGQQPAXX--GQGMPPQFNG--HQPMPGMMFPGGAPGP--GMGFHPMGQPGFHPGMM-GPXXXXXXXXXXXXPPPMHGGPNMPPHMLGGPRGPNGQMLG---GPMQGGFP 232
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BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A835ZE93_9STRA (BED-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE93_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.240e-40
Identity = 74/103 (71.84%), Postives = 89/103 (86.41%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAKKA 309
            MGKKKK    +++++ WC+YCDRVF+HEEVLIQHQKAKHFKC  CNKKL+TAGGLVVH  QVHKETV+ V NAKEGRES ++EI+G+ GIP +AIAERAA+KA
Sbjct:    1 MGKKKKQKVEEEKEQPWCFYCDRVFDHEEVLIQHQKAKHFKCLVCNKKLTTAGGLVVHCQQVHKETVTQVQNAKEGRESAEYEIFGMEGIPAEAIAERAARKA 103
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BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A7S3YKR3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKR3_HETAK)

HSP 1 Score: 144 bits (362), Expect = 1.500e-37
Identity = 63/101 (62.38%), Postives = 84/101 (83.17%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAK 303
            MGKKKK +AV++E++ WC+YC+R+FE E+VLIQHQK+KHFKC  CNKKLSTAGG+VVH  QVHKET+  V NA + R++ D+EIYG+ G+P++A+ E  AK
Sbjct:    1 MGKKKKKTAVREEEKPWCFYCERIFEDEKVLIQHQKSKHFKCHVCNKKLSTAGGMVVHCLQVHKETIKNVHNAIKERDTTDYEIYGMEGVPQEAVDEHRAK 101
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BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A834FYY0_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FYY0_RHOSS)

HSP 1 Score: 141 bits (355), Expect = 7.550e-37
Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 288
            MGKKKK +A+K   E WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+V+H  QVHKE+V  VPNAK GRES D EIYG+ GIP D +A
Sbjct:    1 MGKKKKRAALK---EVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVPKVPNAKPGRESTDIEIYGMQGIPPDVLA 93
[Close]
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A397IUI9_9GLOM (BED-type domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IUI9_9GLOM)

HSP 1 Score: 142 bits (357), Expect = 1.590e-34
Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPE-DAIAE-------RAAKKARTSEASTVDSSSTVRE 357
            MGKKK    ++     WC+YC+R FE E+VLIQHQKAKHFKCP CNKKL+TAGG+VVH +QVHKET+ TVPNA +GRESVD EI+G+ GIP+ DA+A        + +KK RT E ST  SS  +++
Sbjct:    1 MGKKKNKKVIRP----WCWYCERDFEDEKVLIQHQKAKHFKCPHCNKKLNTAGGMVVHVAQVHKETIDTVPNAIKGRESVDVEIFGMEGIPQQDAMAHAQSLENNQPSKKMRTEETSTELSSEEIKK 123
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BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: UPI0007F0076B (protein SUPPRESSOR OF FRI 4 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F0076B)

HSP 1 Score: 142 bits (358), Expect = 3.120e-34
Identity = 86/183 (46.99%), Postives = 106/183 (57.92%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAK-KARTSEASTVDSSSTVREIPAADVIVPLQQPPAPVQGQAVQQQYGGTHQQHAPGVVYAPPPISGIGFPPMLQPGFPGMMVG 546
            MGKKKK +A     + WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKETVS VPNAKEGRES D EIYG+ GIP DA+A    + +   S+   VD       IP +                    Q+GG     + G+ Y PPP +G+  PP   P  P   VG
Sbjct:    1 MGKKKKRAAAAVS-DIWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKETVSKVPNAKEGRESTDIEIYGMQGIPADAMAAHYGEDEDNPSKMGKVD-------IPTS--------------------QFGGGALPGSLGIRYPPPPAAGM--PPYYNPAIPMPRVG 153
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BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: T1E1I5_SILLA (C2H2-type zinc finger protein (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=T1E1I5_SILLA)

HSP 1 Score: 133 bits (335), Expect = 4.150e-34
Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 288
            MG+KKK    K     +CYYCDR F+ E++L+QHQKAKHFKC  CNKKLSTAGG+V+H  QVHKE+V+ VPNAKEGRES + EIYG+ GIP D +A
Sbjct:    1 MGRKKKRQNDK----VFCYYCDREFDDEKILVQHQKAKHFKCHACNKKLSTAGGMVIHVLQVHKESVTKVPNAKEGRESTEIEIYGMQGIPADVLA 92
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BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A2U1NS29_ARTAN (Zinc finger, BED-type n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NS29_ARTAN)

HSP 1 Score: 141 bits (355), Expect = 5.580e-34
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 288
            MGKKKK  +  D    WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKETVS VPNAKEGRES D E+YG+ GIP D +A
Sbjct:    1 MGKKKKRVSTSD---VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIPADVLA 93
[Close]
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A1Q3BMZ7_CEPFO (BED-type domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BMZ7_CEPFO)

HSP 1 Score: 134 bits (338), Expect = 5.860e-34
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 288
            MGKKKK    K     WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE+V+ VPNAK GRES D EIYG+ GIP D +A
Sbjct:    1 MGKKKKRVPSK----VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKSGRESTDIEIYGMQGIPPDVLA 92
[Close]
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A2G3A9J0_CAPAN (Protein SUPPRESSOR OF FRI 4 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3A9J0_CAPAN)

HSP 1 Score: 140 bits (352), Expect = 2.030e-33
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 1 
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 288
            MGKKKK S+     + WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKETVS VPNAKEGRES D E+YG+ GIP D +A
Sbjct:    1 MGKKKKRSSSD---KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIPPDVLA 93
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ22_9PHAE2.200e-5357.02BED-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZE93_9STRA7.240e-4071.84BED-type domain-containing protein n=1 Tax=Tribone... [more]
A0A7S3YKR3_HETAK1.500e-3762.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A834FYY0_RHOSS7.550e-3767.71Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A397IUI9_9GLOM1.590e-3458.27BED-type domain-containing protein n=1 Tax=Diversi... [more]
UPI0007F0076B3.120e-3446.99protein SUPPRESSOR OF FRI 4 n=1 Tax=Daucus carota ... [more]
T1E1I5_SILLA4.150e-3464.58C2H2-type zinc finger protein (Fragment) n=1 Tax=S... [more]
A0A2U1NS29_ARTAN5.580e-3466.67Zinc finger, BED-type n=2 Tax=Artemisia annua TaxI... [more]
A0A1Q3BMZ7_CEPFO5.860e-3464.58BED-type domain-containing protein (Fragment) n=1 ... [more]
A0A2G3A9J0_CAPAN2.030e-3366.67Protein SUPPRESSOR OF FRI 4 n=4 Tax=Capsicum TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5749contigH-elongata_contig5749:7708..10979 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score147.9
Seed ortholog evalue8.9e-33
Seed eggNOG ortholog59689.fgenesh2_kg.1__3297__AT1G30970.1
GOsGO:0000070,GO:0000075,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000819,GO:0001578,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005856,GO:0006355,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007088,GO:0007093,GO:0007094,GO:0007346,GO:0008017,GO:0008092,GO:0008150,GO:0008270,GO:0008608,GO:0009889,GO:0009909,GO:0009910,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0015631,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030071,GO:0031109,GO:0031323,GO:0031326,GO:0031577,GO:0031647,GO:0031974,GO:0031981,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0034622,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0046785,GO:0046872,GO:0046914,GO:0048285,GO:0048519,GO:0048523,GO:0048580,GO:0048581,GO:0048831,GO:0050789,GO:0050793,GO:0050794,GO:0050821,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051225,GO:0051239,GO:0051241,GO:0051252,GO:0051258,GO:0051276,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071173,GO:0071174,GO:0071840,GO:0080090,GO:0090307,GO:0097159,GO:0097435,GO:0098687,GO:0098813,GO:0140014,GO:0140110,GO:1901363,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902850,GO:1903047,GO:1903506,GO:1905818,GO:1905819,GO:1990047,GO:2000026,GO:2000112,GO:2000241,GO:2000242,GO:2000816,GO:2001141,GO:2001251
EggNOG free text desc.SUPPRESSOR of
EggNOG OGs37PP4@33090,3GD51@35493,3HVE4@3699,KOG2893@1,KOG2893@2759
COG Functional cat.S
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionConserved C2H2 zinc finger protein
Ec32 orthologEc-20_000610.1
Exons4
Model size1521
Cds size1056
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5749.13219.1prot_H-elongata_contig5749.13219.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5749 8173..10979 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.2670932-UTR-H-elongata_contig5749:7707..81721622930934.2670932-UTR-H-elongata_contig5749:7707..8172Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5749 7708..8172 -
1691679630.9093182-UTR-H-elongata_contig5749:7707..81721691679630.9093182-UTR-H-elongata_contig5749:7707..8172Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5749 7708..8172 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.2909408-CDS-H-elongata_contig5749:8172..82111622930934.2909408-CDS-H-elongata_contig5749:8172..8211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 8173..8211 -
1691679630.9289923-CDS-H-elongata_contig5749:8172..82111691679630.9289923-CDS-H-elongata_contig5749:8172..8211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 8173..8211 -
1622930934.3043041-CDS-H-elongata_contig5749:8967..91041622930934.3043041-CDS-H-elongata_contig5749:8967..9104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 8968..9104 -
1691679630.9433575-CDS-H-elongata_contig5749:8967..91041691679630.9433575-CDS-H-elongata_contig5749:8967..9104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 8968..9104 -
1622930934.3177683-CDS-H-elongata_contig5749:9409..100831622930934.3177683-CDS-H-elongata_contig5749:9409..10083Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 9410..10083 -
1691679630.953387-CDS-H-elongata_contig5749:9409..100831691679630.953387-CDS-H-elongata_contig5749:9409..10083Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 9410..10083 -
1622930934.3400245-CDS-H-elongata_contig5749:10773..109791622930934.3400245-CDS-H-elongata_contig5749:10773..10979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 10774..10979 -
1691679630.963355-CDS-H-elongata_contig5749:10773..109791691679630.963355-CDS-H-elongata_contig5749:10773..10979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5749 10774..10979 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5749.13219.1

>prot_H-elongata_contig5749.13219.1 ID=prot_H-elongata_contig5749.13219.1|Name=mRNA_H-elongata_contig5749.13219.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=352bp
MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLS
TAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAA
KKARTSEASTVDSSSTVREIPAADVIVPLQQPPAPVQGQAVQQQYGGTHQ
QHAPGVVYAPPPISGIGFPPMLQPGFPGMMVGPPPIFNPMQHGVPQFPPP
MFSGPHVPNGQLLGRPVGPIPGGYPPAPGSLPVRPPINRAPPPPVFPPRH
QFPAGNPPSNGTTNGVPSTPGVPGAARGPTPPLFPAGAGVAQPTISSGPV
LNRQTPPGVLGTPSSGTSALLGVALPIPAAVSGDEEISMEEKRAELAAYK
V*
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mRNA from alignment at H-elongata_contig5749:7708..10979-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5749.13219.1 ID=mRNA_H-elongata_contig5749.13219.1|Name=mRNA_H-elongata_contig5749.13219.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3272bp|location=Sequence derived from alignment at H-elongata_contig5749:7708..10979- (Himanthalia elongata Himel1 dioecious)
ATGGGGAAGAAGAAGAAGCATTCCGCAGTCAAGGACGAAAAGGAAGCATG
GTGCTACTATTGTGATCGAGTCTTTGAACACGAAGAAGTTCTGATACAAC
ATCAAAAAGCCAAGCATTTCAAGTGCCCAACCTGCAATAAGAAGTTGTCG
ACCGCGGGAGGACTAGTGGTGCACAACTCTCAAGTACACAAGGAAACAGT
CTCCACGTGAGTAAACTGAGATGGTCTCTACTTGACTGTATAACTGCATA
GGTGCTTTGTCCCTCAGTCATCGCTATTTGACTTGAGGTTGTTGTTTTGT
TTTGCTTGATTCATTAGTGGTGGATTGCCGCGGGGTCATCTCACGGGCGT
GCGTTACAGTAACGTTTCTCACTGGATTAAGACAATGTTTTCTCATCCAA
GACTTGCTCATATGTCACCGTTACTACTATGATTGGAATATGTAATATAG
TCAAAAGACGCACTAGGTACACGATGCGAAAATCATGATCTCATGGCGTT
TGAAGTTTACCGCCTCTTTCGCGAGTACGAGTAGCACGTTAGGCCAGGAG
ATTCTAAAATACCAATCCCAAAAGCTCCGAGCCATATTATGGTAAAAAAA
ATGTATCCTTCTGTATCCCGTCGTAGTCAGTAACTCTGACACAACGTTTA
CCCCATGCAAGACTTCTTTGTATGGGACCGTGACGGTGGTACGTGAAAAA
TAATCATGCCTGGTAGTCAAAAGACGCTTTAGTGGCATACCAGGTACACG
ATACGAAAATCATAGTTACCGGCGCTTCAATTGCATCGCCCCACTAGCAC
TAATATTCCGTTAGGTCAAATGAGATTCTAAATAAAAACTACAAATGCTC
CAGGCCATATTTTGACCGAGTCTTCATGTTGATTTCCTTCTCTCAGGGTA
CCCAATGCGAAGGAAGGACGAGAGAGCGTGGATTTCGAGATTTATGGTAT
CAATGGGATTCCAGAAGATGCCATAGCAGAGAGAGCAGCCAAAAAAGCGC
GCACATCCGAAGCGAGCACCGTAGATAGCTCCTCAACGGTGCGAGAGATA
CCAGCTGCCGATGTCATTGTCCCCTTGCAGCAACCACCAGCACCTGTGCA
AGGGCAAGCAGTTCAACAACAATACGGCGGTACACATCAGCAACATGCGC
CAGGCGTTGTGTACGCCCCCCCCCCAATCTCAGGGATCGGATTCCCTCCT
ATGCTCCAACCGGGATTTCCTGGGATGATGGTAGGGCCTCCACCAATCTT
CAATCCCATGCAGCATGGCGTCCCTCAATTTCCCCCGCCTATGTTCAGCG
GCCCTCACGTTCCTAACGGACAACTCTTAGGGAGGCCAGTTGGTCCAATT
CCGGGAGGATATCCTCCAGCTCCGGGAAGCCTCCCAGTCCGTCCACCTAT
TAATAGAGCGCCACCTCCTCCAGTTTTCCCGCCGAGACATCAATTTCCCG
CTGGAAACCCTCCCAGCAACGGTACCACGAATGGCGTGCCGTCTACGCCT
GGAGTTCCCGGGGCAGCAAGAGGGCCCACACCGCCTTTGTTTCCAGCGGG
AGCGGGAGTAGCGCAACCAAGTGAGTCTCACATAAGTTGACATGTACCTT
GAACCATTCCCGTTCCTGTTAATAGGTAGAAATCGTTCGCGTAGAAGCCG
GCGGTCCGATTACTCATCAGTTGAAAGTAGGATATGTTTTGTGCCTGCCC
ATGAAAACTGTATGATGGAATCGACTCCAACTCGCTAACGTCCCTCTGTT
TCGCTCGTGTCAAAAGAGCATGAGGCGGTCGAGCTGTCTTCCGCCACTAT
CAAACTCGCGCGAAATAATAGCTCCATTCGATCTTGCGCTTGTGTTGTAC
CTCGTCGTATATTTTATTTTGGCAGCGATCTCCAGTGGACCTGTGCTCAA
CCGACAAACCCCACCTGGAGTCTTAGGCACACCATCAAGCGGGACAAGCG
CATTGCTGGGGGTAGCGCTGCCTATTCCAGCTGCTGTTTCAGGAGATGAG
GAAATATCGATGGTCAGTGCTTTTTTCACACACTCTTGTAGTGTGCCCAT
ATTTTACAATTCAAGCGGCGAAGCCAAAGCCTTGGCAGTGCCACCCTGAG
GTGGGCGTCAGCAGGAACCATGACTCGTTTTCACCATTATCATCGTTGTG
TTCGTGGCCGATGGCTACAACACACGCATTTTCGAGGTTGTCGTCTGCAG
GTTTCTTATGTAAACAAGAAAATAAGTGTTCCAATTCAGCGCTGAGTAAC
CAATTTCCTCGCAGTTCCCTCGAAAAGTACTTTTTGTACGACAATGAAGA
CTATTTGCTAACGTACTTGCACCGTGTCGTTGTGGTTTGACACGGGGCCC
AGTCAACCACTGGCACCGCATTTGTCGAGTCACCCACCCCCTTCAGGAGT
CGCGACGAGTTAGTTGGGATCGTTCAAGGCAAGCCTACGTTTGAAATGCA
TTTGATGACTTGTTGAACAACTGGCGTCACCGGGATAAATAATAAAATCG
TTCATAATACGTAGTCCTGCTTTTTCTATCTAGTTCTAAAGCAACTGAAA
AAAAGCTAGTTAAAATTTAAAATTTGCACTAATTTTAAAAAGTTCTGTAG
CCACGCATTTGACAGATATTTATTTTGCCTAAGATCTCCGATTAGGGGAG
TAGTGCTCTGGCCCATAATGATTTTTGGGGCCTGCCCGAATTACCTTGAC
AATGACTCACTTAGACCTGCCAAAGTGCTATCACAGACACCAACCGCTCC
TTACCCCATGCTCTACAGGAAGAGAAGCGAGCGGAGCTGGCTGCGTACAA
GGTGTGAGCGTATTTGCTTCTGCCACATCGTTTGGGGGATGTTGGAGGTT
GGTACCGCGAGACGTATAATATTGTCTCTTGGACCACTTGGCGATAGCGT
AAATTCTGAAGGAGCGGATTTTGACGGGCAAGTGGCCGTCTCGGATTTAT
ATATTGTACTACGGATTATCATGTCGAGTCAATGTAGTAAACGCTGTTCG
AATGCGCTATCGACGCACGCAAAACGGGGGAGGACCTGGAGACGAGGTGG
GTGGGGAAGCTTAGTTGCCGTTGTTTTACTGATATTGTGACTGTGCGTTA
GCAGTGCCGCATGTATCGGTATACTCAACCAAGGCCAGGGCACAATCGAA
GGTGAAGTGCACCACGTTTTCTTGTTAAATTACATCAAGAGTACTCAGAA
ATGTACGGCAGCTAAAGTCGAATTTTGTCTAAAGATGCAGAATTTAAAAA
TTCCTAAGCTTCAGACGTCGGT
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Coding sequence (CDS) from alignment at H-elongata_contig5749:7708..10979-

>mRNA_H-elongata_contig5749.13219.1 ID=mRNA_H-elongata_contig5749.13219.1|Name=mRNA_H-elongata_contig5749.13219.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2112bp|location=Sequence derived from alignment at H-elongata_contig5749:7708..10979- (Himanthalia elongata Himel1 dioecious)
ATGGGGAAGAAGAAGAAGCATTCCGCAGTCAAGGACGAAAAGGAAGCATG
GTGCTACTATTGTGATCGAGTCTTTGAACACGAAGAAGTTCTGATACAAC
ATCAAAAAGCCAAGCATTTCAAGTGCCCAACCTGCAATAAGAAGTTGTCG
ACCGCGGGAGGACTAGTGGTGCACAACTCTCAAGTACACAAGGAAACAGT
CTCCACATGGGGAAGAAGAAGAAGCATTCCGCAGTCAAGGACGAAAAGGA
AGCATGGTGCTACTATTGTGATCGAGTCTTTGAACACGAAGAAGTTCTGA
TACAACATCAAAAAGCCAAGCATTTCAAGTGCCCAACCTGCAATAAGAAG
TTGTCGACCGCGGGAGGACTAGTGGTGCACAACTCTCAAGTACACAAGGA
AACAGTCTCCACGGTACCCAATGCGAAGGAAGGACGAGAGAGCGTGGATT
TCGAGATTTATGGTATCAATGGGATTCCAGAAGATGCCATAGCAGAGAGA
GCAGCCAAAAAAGCGCGCACATCCGAAGCGAGCACCGTAGATAGCTCCTC
AACGGTGCGAGAGATACCAGCTGCCGATGTCATTGTCCCCTTGCAGCAAC
CACCAGCACCTGTGCAAGGGCAAGCAGTTCAACAACAATACGGCGGTACA
CATCAGCAACATGCGCCAGGCGTTGTGTACGCCCCCCCCCCAATCTCAGG
GATCGGATTCCCTCCTATGCTCCAACCGGGATTTCCTGGGATGATGGTAG
GGCCTCCACCAATCTTCAATCCCATGCAGCATGGCGTCCCTCAATTTCCC
CCGCCTATGTTCAGCGGCCCTCACGTTCCTAACGGACAACTCTTAGGGAG
GCCAGTTGGTCCAATTCCGGGAGGATATCCTCCAGCTCCGGGAAGCCTCC
CAGTCCGTCCACCTATTAATAGAGCGCCACCTCCTCCAGTTTTCCCGCCG
AGACATCAATTTCCCGCTGGAAACCCTCCCAGCAACGGTACCACGAATGG
CGTGCCGTCTACGCCTGGAGTTCCCGGGGCAGCAAGAGGGCCCACACCGC
CTTTGTTTCCAGCGGGAGCGGGAGTAGCGCAACCAAGGTACCCAATGCGA
AGGAAGGACGAGAGAGCGTGGATTTCGAGATTTATGGTATCAATGGGATT
CCAGAAGATGCCATAGCAGAGAGAGCAGCCAAAAAAGCGCGCACATCCGA
AGCGAGCACCGTAGATAGCTCCTCAACGGTGCGAGAGATACCAGCTGCCG
ATGTCATTGTCCCCTTGCAGCAACCACCAGCACCTGTGCAAGGGCAAGCA
GTTCAACAACAATACGGCGGTACACATCAGCAACATGCGCCAGGCGTTGT
GTACGCCCCCCCCCCAATCTCAGGGATCGGATTCCCTCCTATGCTCCAAC
CGGGATTTCCTGGGATGATGGTAGGGCCTCCACCAATCTTCAATCCCATG
CAGCATGGCGTCCCTCAATTTCCCCCGCCTATGTTCAGCGGCCCTCACGT
TCCTAACGGACAACTCTTAGGGAGGCCAGTTGGTCCAATTCCGGGAGGAT
ATCCTCCAGCTCCGGGAAGCCTCCCAGTCCGTCCACCTATTAATAGAGCG
CCACCTCCTCCAGTTTTCCCGCCGAGACATCAATTTCCCGCTGGAAACCC
TCCCAGCAACGGTACCACGAATGGCGTGCCGTCTACGCCTGGAGTTCCCG
GGGCAGCAAGAGGGCCCACACCGCCTTTGTTTCCAGCGGGAGCGGGAGTA
GCGCAACCAACGATCTCCAGTGGACCTGTGCTCAACCGACAAACCCCACC
TGGAGTCTTAGGCACACCATCAAGCGGGACAAGCGCATTGCTGGGGGTAG
CGCTGCCTATTCCAGCTGCTGTTTCAGGAGATGAGGAAATATCGATGCGA
TCTCCAGTGGACCTGTGCTCAACCGACAAACCCCACCTGGAGTCTTAGGC
ACACCATCAAGCGGGACAAGCGCATTGCTGGGGGTAGCGCTGCCTATTCC
AGCTGCTGTTTCAGGAGATGAGGAAATATCGATGGAAGAGAAGCGAGCGG
AGCTGGCTGCGTACAAGGTGTGAGAAGAGAAGCGAGCGGAGCTGGCTGCG
TACAAGGTGTGA
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