prot_H-elongata_contig5749.13218.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5749.13218.1
Unique Nameprot_H-elongata_contig5749.13218.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length346
Homology
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: D7G4S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S1_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 6.390e-106
Identity = 180/328 (54.88%), Postives = 235/328 (71.65%), Query Frame = 0
Query:    8 SVAGWLFLGIRVGAFFLSGVQPNMPFSLSRRASVWCSGCPRVVLTKRTSWAAA------DCHHLHMLAEND-VESPVDDVNEKRQYALDTLIEQFTSPENGNLTAAVDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFVEKPLDTNKVQPKQLRAAIQDMIAEVGELGQAADARLTVFLRGLQVEIDDVIKSSERPGPYRE 328
            +  GWL    +  AF + G Q   P + + R     S  P    T+R   AAA          +HMLA  D V+S V   +E+    LD LI+QFTSP++GN+TA V++YLD CDHA LTHLRGRI +  A+S    AL+ VEE INMAMQRRLAAAD+NLR+VLDLAPDIK MEG+IRTLFREG+V+MAF+V I+MNLQ AK+A GA++AV LLTHLT F+M +QDE++NPE KLLR+LLRT+CD VRKS+LQ+ LQ+ + D+F+E+P D +KVQP  L+ AI DMI +V ++GQA D  +T  L+GLQVE++ V+  S+RPGPY++
Sbjct:   10 ATVGWLLARRQAEAFSVVGFQK--PQATACRTRALASSVPASSPTQRILDAAALRGPSRGLLPMHMLAGGDAVQSSVGTKSEEHS-VLDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLERPPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTDSLKGLQVEVNTVVAGSKRPGPYKQ 334          
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A835YR16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR16_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.500e-43
Identity = 98/211 (46.45%), Postives = 130/211 (61.61%), Query Frame = 0
Query:  114 CDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEAN-GAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECD---RVRKSMLQEHLQITHYDIFVEKPLDTNKVQPKQLRAAI---QDMIAEVGELGQAADARLTVFLRGLQVEIDDVI 317
            CD+ FL +L GRI  AG +S  G  L  V + IN+AMQRRL AAD NLR VL  APD+K ME  +R LFR G+ DMAF+V +NMNL  A+EA  GAE AV +LTHL   +M++QD +V PE++LLR L+R   D     R+ +L+E L ++         L    V P QLR AI   Q+   ++ ++ +  D  LT  LRGL  EID+V+
Sbjct:    2 CDYGFLMYLNGRIGEAGPDSEEGTKLSAVAQEINVAMQRRLVAADANLRAVLANAPDLKKMEADLRRLFRTGQADMAFMVVLNMNLAQAREAGPGAEGAVAVLTHLNTAIMEMQDTRVAPEVRLLRMLMRASDDDNAEKRRDLLKEQLDLSGGGGADSSGL----VTPDQLRDAIRELQEQATQIEKVSKEYDTGLTEKLRGLLREIDEVL 208          
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A2V3IXN8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN8_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 3.880e-15
Identity = 72/221 (32.58%), Postives = 115/221 (52.04%), Query Frame = 0
Query:   81 NEKRQYALDTLIEQFTSPENGN----LTAAVDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFVEKPLDTN-KVQPKQLRAAIQDMIAEVGELGQ 296
            NE    + D LI++  S  + +    L  AV+      D   L  +  RI+  G++S   I LR V   I++ M  R+ A   ++R VL  A D  AM  +I TL R+G++D AFI+ +  NL  AK+AN A+ AV++L+        V+D Q+ PE++L+R+LLRTE    R  ML +  +       V+  + +   V  K+  AA++ +I E G + +
Sbjct:  150 NEIAAASYDELIDEIKSARDVSNPAALKTAVEASYQRIDLRLLERINERISFKGSDSEALIDLRNV---ISVVMNERIQAGTESVRTVL-AAGDAIAMRKQIDTLARKGKLDDAFILLLQANLDQAKKAN-AQQAVEVLSLALNHAQSVKDVQLEPEVRLIRALLRTEDSEARTKMLMDSFKSRGSVTLVDGTVTSGIAVDGKKFVAALRKLIEEFGNVDE 365          
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A7S1EQS5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQS5_9RHOD)

HSP 1 Score: 80.9 bits (198), Expect = 1.410e-13
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 0
Query:  127 ASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFVEKPLDTNK-VQPKQLRAAIQDMIAEVGELGQAADARLTVFLRGLQVEIDDVIK 318
            AS+G E+        + E +  AM  R+ +A   LR  L   P   AM  K+    + GE+D AF++ +  NL  AK+A   +NAVK+LT L    M+++D+QV PE+ L+R LLRTE +  RKS+L++ L +    +  +    +   V  K+L AA++ +I + G +    D+ L   +  +  E +DV +
Sbjct:   70 ASSGDETA-----EKISEIVQKAMADRMQSAADRLRVCLTAGPP-DAMVQKLYDFVQAGELDDAFLLLLAGNLDQAKKAQN-DNAVKILTILQRKTMELRDQQVEPEVALVRQLLRTETEDARKSILRKALAVKKKVMLSDGSQSSGTTVDGKKLVAAMRKLIEQFGNV----DSTLVERVSMIGTEAEDVAR 251          
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A7S1XEX3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEX3_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 5.850e-12
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 0
Query:   91 LIEQFTSPENGNLTAAVDKYLDFCDHAFLTHLRGRI-ASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDL-APDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSML 253
            L+ +     +G + +AV +     D AFL HL G +  ++G E T    L  V+  I   M  ++  A + +R +L   AP+  AM+ K+   FR GEVD AF++ +  N+  A++A GAE AV +LT L M  M++ D    PEL L+R LLRT+    RK++L
Sbjct:  136 LLREIVQARDG-VESAVSRLYGRVDQAFLEHLEGALEGTSGEERT---KLEQVKAEILRRMNEKMEKAASVMRSILQAGAPE--AMDTKLVEHFRFGEVDDAFLLLLEGNIDQARKA-GAEPAVAVLTKLRMKAMELGDTNAEPELVLVRKLLRTDEAAARKALL 293          
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Match: A0A7R9UVW9_DIALT (Hypothetical protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVW9_DIALT)

HSP 1 Score: 61.2 bits (147), Expect = 7.590e-7
Identity = 62/255 (24.31%), Postives = 124/255 (48.63%), Query Frame = 0
Query:   77 VDDVNEKRQYALDTLIEQFTSPENGNLTAA--VDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAMQRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQGAKEANGAENAVKLLTHL-TMFMMDVQDEQVNPELKLLRSLLRTECDRVRKSMLQEHLQITHYDIFV-----EKPLDTNK--VQPKQLRAAIQDMIAEVGELGQAADARLTVFLRGLQVEIDDVIKSSE 321
            +D+  ++R Y  + L+E     ++ N++ A  V    +  D+ F+  L  ++ +A  E     +L  V+E +N  M  R+  A   L+++L   P    M   +    + G ++ + ++ +  N++ A EA GA+ A +L++ L T   +++ D+ V PE++LLR LLR E    R+ +L++ +   +    +     E P  + +  V+ ++L AA+  + A+ G + +           GL   ID + K +E
Sbjct:   42 LDEAAKERGY--NALLEMMLRADSFNISQADMVKASYEKIDYTFMQKLGAQVEAAEGEGK--DSLVRVQELVNKEMSERMGRAAEALKKLLGAGPS--GMFRLVPDYMQRGLLEESLLLLLEANIRQASEA-GAKPAAELMSRLMTQIRLEI-DKAVEPEIRLLRELLRIESADARRELLRQKIAPKNVPAILIAGAREAPPASKEPDVKVRKLAAALGKLKAQFGNVDEELQG-------GLGARIDMIAKEAE 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5749.13218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G4S1_ECTSI6.390e-10654.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YR16_9STRA1.500e-4346.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2V3IXN8_9FLOR3.880e-1532.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1EQS5_9RHOD1.410e-1332.64Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1XEX3_9RHOD5.850e-1236.36Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7R9UVW9_DIALT7.590e-724.31Hypothetical protein n=3 Tax=Diacronema lutheri Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..345
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5749contigH-elongata_contig5749:2572..7610 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5749.13218.1mRNA_H-elongata_contig5749.13218.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5749 2569..7617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5749.13218.1 ID=prot_H-elongata_contig5749.13218.1|Name=mRNA_H-elongata_contig5749.13218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=346bp
MPSPIFLSVAGWLFLGIRVGAFFLSGVQPNMPFSLSRRASVWCSGCPRVV
LTKRTSWAAADCHHLHMLAENDVESPVDDVNEKRQYALDTLIEQFTSPEN
GNLTAAVDKYLDFCDHAFLTHLRGRIASAGAESTWGIALRLVEEGINMAM
QRRLAAADTNLRRVLDLAPDIKAMEGKIRTLFREGEVDMAFIVTINMNLQ
GAKEANGAENAVKLLTHLTMFMMDVQDEQVNPELKLLRSLLRTECDRVRK
SMLQEHLQITHYDIFVEKPLDTNKVQPKQLRAAIQDMIAEVGELGQAADA
RLTVFLRGLQVEIDDVIKSSERPGPYREYHRRNLQTGVEGNDHAS*
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