mRNA_H-elongata_contig57481.13217.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig57481.13217.1
Unique NamemRNA_H-elongata_contig57481.13217.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: D7FVB8_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB8_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 1.920e-146
Identity = 244/398 (61.31%), Postives = 279/398 (70.10%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHD----HGHGP----HRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTDVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCMV 1170
            +KDGADGS+LADNLFEL+NGCICC+VKDDLVTTLE LLQRR+ FDY+IIETTGLANPGPVASVFWLD+ALESALRLD IVTLVDAKNF RQLQR P E       GE +      +  +NEAA+QVAYADRVLINK+DLVS E L +V+ +V+ IN +A V CT RSAVD+ W+LDT CFS ELA  +DPSLAP         Q +   GS                  D  I  T +   D  VH+HD     GH      H +G+ C  C A       E P G  CSVHDP+VTTCA+D+ GSL+L RLERWLG LLW+PPPGGT+VYRVKGVVSVEGR ERFVVQGV DLFEVTP    GSAW+E EAR CKVVFIG+ +S  DLE G+RSCMV
Sbjct:   98 AKDGADGSVLADNLFELRNGCICCAVKDDLVTTLEMLLQRRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGEGAEAGAEGEEQ----SGKRPKNEAAMQVAYADRVLINKSDLVSTETLDDVVGRVRTINALAEVRCTKRSAVDLAWILDTECFSSELAAALDPSLAPPRALLGTAQQNEGGRGSSAA---------------DRGIARTGSGPGDAHVHSHDVEPSGGHTESVHHHADGEACDECAAA------EGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSRDLELGIRSCMV 470          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A835YKS4_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS4_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.300e-75
Identity = 173/389 (44.47%), Postives = 221/389 (56.81%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTDVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCM 1167
            +KDG DGS+LADNLFEL+NGCICC+VKDDLVTTLETLLQ+RS FDYIIIETTGLANPGPVA+ FWLDDALESALRLD I+T+VDAKN  R L                    D++R    EAA+Q+A+ADR+L+NK+DLVS   +A + ++++ IN    +  T R A+D+D VLD RCF        D + A              P                            + + SD E          H +GD C    A S+S S    SG PC VH   V+T AI +  +++L  L+           P  T VYR+KGV++V G  +++V+QGV DLF+VT T A   AW+ DE R  KVVFIG+ + R  LE GLR C+
Sbjct:   70 AKDGMDGSVLADNLFELRNGCICCTVKDDLVTTLETLLQQRSKFDYIIIETTGLANPGPVAACFWLDDALESALRLDAIITVVDAKNIARYL--------------------DESR----EAALQIAFADRLLLNKSDLVSAARVAALSSRLRGINAACDIEVTHRCAIDLDKVLDLRCFHA------DSTAAXXXXXXXXXXXXXXP----------------------------VELCSDAE----------HEHGDSCGHGAAQSSSGSS---SGAPC-VHTSGVSTFAITLTEAVDLVALDA--------SRPHRT-VYRIKGVLAVAGSDKKYVLQGVHDLFDVTETTA---AWEPDEPRLSKVVFIGRGLDRGKLEEGLRGCV 374          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: G4Z3P4_PHYSP (CobW C-terminal domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z3P4_PHYSP)

HSP 1 Score: 211 bits (536), Expect = 5.560e-58
Identity = 150/411 (36.50%), Postives = 199/411 (48.42%), Query Frame = 1
Query:    1 SKDGA-DGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVS-KEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHD------HGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTD--------VYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCMV 1170
            +KDGA D + + D  +EL NGC+CCSV+ DLV TLE LL+RR  FDYI++ETTG+A+PG VAS+FW+DD LE  + LDGIVTLVDA      L   PD                     Q EAA Q+AYADR+L+NK DLV  K+    +  +V  +N +A+VH T RS VD+D +L+ + F+   A  ++                                            KE  ++   GE H H+      H H  H  G                              TTC     G L+  +LERWLGELLWE               ++RVKGVV+V G   +F++Q V +LFEV    AS   W EDE      R  +VVFIG ++ +++LE GLRSC+V
Sbjct:   65 AKDGAGDDAQVMDGFYELSNGCVCCSVRSDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDDELEGRIFLDGIVTLVDAPRLDFHLDH-PD--------------------TQREAAAQLAYADRILLNKGDLVQDKDRRREIEQRVSQVNGVASVHWTERSRVDLDDILNIKSFTTSRAEQVE--------------------------------------------KELHSLLYAGEEHDHEKCNDEHHDHTTHTGG----------------------------MQTTCVRIRDGPLDHDKLERWLGELLWEQEDDEIKDAAAKHQKLFRVKGVVAVSGEPNKFILQAVHELFEVY---ASEERWTEDELSVMEGRVTQVVFIGLHLRKNELEAGLRSCVV 379          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A329RXQ7_9STRA (CobW C-terminal domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A329RXQ7_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.890e-57
Identity = 152/413 (36.80%), Postives = 198/413 (47.94%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSK-EVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTH----DHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLW--------EPPPGGT-----DVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCMV 1170
            +KDGA G ++ D  +EL NGC+CCSV+DDLV TLE LL+RR  FDYI++ETTG+A+PG VASVFW+DD LE  + LDGIVTLVDA      L   PD                     Q EAA Q+AYADR+L+NK DLV   E    +  +V  +N +A+V  T RS VD+D +L+ + F+   A  ++  L                                           TL  E   E H +     H H  H  G                              TTC     G L+  +LERWLGELLW        E  PG        ++RVKGVV++ G   +F++Q V +LFEV    AS   W EDE     +R  +VVFIG ++ + +LE GLRSC+V
Sbjct:   71 AKDGAGGDVM-DGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLNFHLTH-PD--------------------TQREAAAQLAYADRILLNKGDLVPDIEQRLEIEQKVTQVNGVASVRWTERSRVDLDDILNIKSFTTSRAEQVEKEL------------------------------------------HTLLTEGKEEDHENCKDESHDHAIHTGG----------------------------MQTTCVRIRDGPLDQDKLERWLGELLWDQDEDAAAEIKPGSEAATRQKLFRVKGVVAIAGEPSKFILQAVHELFEVY---ASEERWTEDELNNKASRVTQVVFIGLHLRKSELEAGLRSCVV 388          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: K3WNX3_GLOUD (CobW C-terminal domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNX3_GLOUD)

HSP 1 Score: 209 bits (533), Expect = 2.210e-57
Identity = 143/398 (35.93%), Postives = 204/398 (51.26%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLV-SKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTC-AIDILGSLELRRLERWLGELLWEPPPGGTD-------VYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCM 1167
            +KDGA+G +  D+ +EL NGC+CCSV+DDLV TLE LL RR  FDYI++ETTG+ANPG VASVFW+DD LE  + LDGIVTLVDA   +  L   PD                     +NEAA Q+AYADR+L+NK DLV S+E    ++A+V+A+N +A V  T R+ +D+D +L+ + F+ + AL I+  L        GHH+                      SG   + +E          HTH                                        TTC +I     L++ +LERWLGELLW+   G +        ++R+KGV+++     +F++Q V +LFEV  +  S S   +++    ++VFIG ++    LE G RSC+
Sbjct:   86 AKDGANGQVF-DDFYELSNGCVCCSVRDDLVNTLEKLLARRDRFDYILVETTGMANPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLQFHLDH-PD--------------------TRNEAASQLAYADRILLNKRDLVTSEERQEAIVARVKAVNAIAKVSWTHRAEIDLDEILNIQSFTSQRALDIESILTAQQLQQQGHHR---------------------HSGEGEHKEE----------HTHT-----------------------------------GAMQTTCLSIGDGARLDMSKLERWLGELLWDQADGVSSASTKDQRLFRMKGVLAIADEPNKFILQAVHELFEVYVSDESWSEASQEDVCS-RIVFIGLHLDLKRLESGFRSCI 394          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: D0P3V3_PHYIT (Cobalamin synthesis protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P3V3_PHYIT)

HSP 1 Score: 209 bits (532), Expect = 3.070e-57
Identity = 154/413 (37.29%), Postives = 207/413 (50.12%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLV-SKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDC---ARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEP--------PPGGT-----DVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCK------VVFIGKYISRDDLERGLRSCMV 1170
            +KDGA G ++ D  +EL NGC+CCSV+DDLV TLE LL+R+  FDYI++ETTG+A+PG VASVFW+DD LE  + LDGIVTLVDA      L+  PD                     Q EA+ Q+AYADR+L+NK+DLV  KE    +  +V   N MA+V    RS V++  +L+ + F+   A  ++                                            KE   + ++G+   HDH        +DC   +  NAT T   +               TTC     G L   +LERWLGELLWE          PG       +++RVKGVV+V G  ++FV+Q V +LFEV    AS   W EDE  +CK      VVFIG ++ + +LE GLRSC+V
Sbjct:   75 AKDGAGGDVM-DGFYELSNGCVCCSVRDDLVNTLEKLLERQDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLNFHLKH-PD--------------------TQREASAQLAYADRILLNKSDLVPDKEQRLAIEKKVTQANGMASVRWAERSRVELGDILNIKSFTTSRAAQVE--------------------------------------------KELHTLLTEGKEEDHDH--------EDCNEESDVNATHTGGMQ---------------TTCVRIRDGLLGRDKLERWLGELLWEQGKAVGAEIQPGSEAATRQELFRVKGVVAVAGEPKKFVLQAVHELFEVY---ASEEDWTEDEL-NCKESLVTQVVFIGLHLRKSELEAGLRSCVV 394          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: B5Y598_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y598_PHATC)

HSP 1 Score: 207 bits (526), Expect = 6.050e-57
Identity = 144/391 (36.83%), Postives = 189/391 (48.34%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSKEVLANVIAQVQAINTMAAVHCTTRSAV-DIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTDVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDEARHCKVVFIGKYISRDDLERGLRSCMV 1170
            ++DG D   L D L EL NGCICC+VKD LV+TLE LLQRR   DYI+IE +G+ANPGP+AS+FWLD+ L S LRLDGIVTLVDA +  RQL                         A  EAA Q+AYADR+L+NK DLV +     ++  ++ I+  A +  T  SAV D+ WVLD  CF  +    +D +L                                            +   SD   H+H H HG       C+ C A                 H  +V+T AI   GS++LR+L++WL  LLW        V  V+          RF+VQ V DL+E  P       W  +E R CKVVFIG+ + ++DL +G  SCM+
Sbjct:   48 ARDGVDNGSLID-LIELPNGCICCTVKDSLVSTLELLLQRRRDLDYILIECSGMANPGPIASLFWLDEGL-SRLRLDGIVTLVDAAHLERQLG------------------------ATKEAAQQIAYADRILLNKVDLVDEASALRLLNLIRTIHPTAPIRRTQFSAVPDLTWVLDASCFDVDRVKDVDRAL------------------------------------------NEIEHCSD---HSHQHDHGKEAT---CSICFAHK---------------HTASVSTLAIVEEGSVDLRKLDQWLASLLWPNQDEQDKVLPVEFTDDHGLDSRRFIVQAVHDLWETHPASRE-LRWDSEEVRDCKVVFIGRNLKKEDLRKGFLSCML 348          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A225W6C1_9STRA (Cobalamin synthesis protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6C1_9STRA)

HSP 1 Score: 207 bits (527), Expect = 9.850e-57
Identity = 149/407 (36.61%), Postives = 198/407 (48.65%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSK-EVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPGGTD------------VYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCM 1167
            +KDGA   M  D  +EL NGC+CCSV+DDLV TLE LL+RR  FDYI++ETTG+A+PG VAS+FW+DD LE  + LDGIVTLVDA      L   PD                     Q EAA Q+AYADR+L+NK DLVS  E    +  +   IN MA++  T RS VD+D +L+ + F+   A  ++  L          H+G+                         ++ E  + E     H H H  G       C R                   +HD           G L+  +LERWLGELLWE     T+            ++R+KGVV+V G   +F++Q V +LFEV    AS   W  DE      R  +VVFIG ++ + +LE GLRSC+
Sbjct:   65 AKDGAGDVM--DGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDDELEGRIFLDGIVTLVDAPRLDFHLSH-PD--------------------TQREAAAQLAYADRILLNKGDLVSDTEQRREIEKKTTQINGMASIRWTERSRVDLDDILNIKSFTTSRAEQVEKELRTL-------HEGEE------------------------HVHENCSDEQ----HDHTHTGGMQTT---CVR-------------------IHD-----------GPLDQDKLERWLGELLWEQEEVDTETESGSDAAKRQKLFRIKGVVAVAGESNKFILQAVHELFEVY---ASDEQWANDELDSKDGRVTQVVFIGLHLRKSELETGLRSCV 377          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A0P1AZT7_PLAHL (Cobalamin synthesis protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZT7_PLAHL)

HSP 1 Score: 207 bits (528), Expect = 1.370e-56
Identity = 149/410 (36.34%), Postives = 206/410 (50.24%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLVSK-EVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVES-DGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGS-LELRRLERWLGELLWEPPPG-------GTDV------YRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE-----ARHCKVVFIGKYISRDDLERGLRSCM 1167
            +KDGADG+++ D  +EL NGCICCSV+DDLV TLE LL+RR  FDYI++ETTG+A+PG VAS+FW+D  LES + LDGIVTLVD+                        D + K      EA  Q+AYADR+L+NK+DL+S  +  A++  QV+ IN MA+V  T RS VD+  +L+ + F+   A  ++  L          H   H                          KE    E  +GE H H                                 S+H   + T  + I  + L+  +LERWLGELLWE   G       GTDV      +R+KG+VSV    +++++Q V +LFEV    AS   W +DE     +R  ++VFIG ++ +D  E GLRSC+
Sbjct:   82 AKDGADGNVM-DGFYELSNGCICCSVRDDLVNTLEKLLKRRDRFDYIVVETTGMADPGRVASIFWVDSELESRIFLDGIVTLVDSPRL---------------------DFYLKHPDTLREAVAQLAYADRILLNKSDLLSDMKQRASIQRQVKQINGMASVSWTERSRVDLADILNIKSFTTIRAEQVEKEL----------HALMHKR------------------------KEIFDQEQCNGEDHDH---------------------------------SIHTGGMQTVCVRIKDAPLDQDKLERWLGELLWEQDVGKSAESMLGTDVALRQKIFRMKGIVSVANERKKYILQAVQELFEVY---ASEECWNDDEFVSNESRVTQIVFIGLHLHKDQFEEGLRSCL 399          
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Match: A0A662XB97_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB97_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.070e-55
Identity = 149/410 (36.34%), Postives = 201/410 (49.02%), Query Frame = 1
Query:    1 SKDGADGSMLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGERKDQFDKARTAQNEAAVQVAYADRVLINKTDLV-SKEVLANVIAQVQAINTMAAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHPEGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNGDDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWLGELLWEPPPG------GTDVY------RVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSAWKEDE--------ARHCKVVFIGKYISRDDLERGLRSCM 1167
            +KDG DG +  D+ +EL NGC+CCSV+DDLV TLE LL+RR  FDYI++ETTG+A+PG VAS+FW+D  LE  + LDGIVTLVDA      L   PD                     Q EAA Q+AYADR+L+NK DLV  K   A +  +V ++N MA+V  T R+ V++D +L  + F+   A  ++  L          H+  H +G              ++S +D +                 H H  H  G                              TTC     GSL+L +LER LGELLWE          GTDV+      RVKGVV++     +F++Q V +LFEV P   S   W  DE        AR  +VVFIG ++ +D+L  GL+ C+
Sbjct:   76 AKDGGDGEVF-DDFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDAELEGRIYLDGIVTLVDAPRLDFHLGH-PD--------------------TQREAAAQLAYADRILLNKGDLVPDKADRATIEQRVSSVNGMASVRWTERARVELDDILHIKSFTTSRAAEVEQEL----------HELLHHDG--------------HESCDDEH-----------------HNHAIHTGG----------------------------MQTTCVTIREGSLDLEKLERHLGELLWEQEENDAGTESGTDVFNRQKLFRVKGVVAIVNEPNKFILQAVHELFEVYP---SEERWAADELSNDGGEEARCTQVVFIGLHLRKDELVAGLQGCV 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57481.13217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVB8_ECTSI1.920e-14661.31CobW C-terminal domain-containing protein n=2 Tax=... [more]
A0A835YKS4_9STRA1.300e-7544.47CobW/HypB/UreG, nucleotide-binding domain-containi... [more]
G4Z3P4_PHYSP5.560e-5836.50CobW C-terminal domain-containing protein n=4 Tax=... [more]
A0A329RXQ7_9STRA1.890e-5736.80CobW C-terminal domain-containing protein n=12 Tax... [more]
K3WNX3_GLOUD2.210e-5735.93CobW C-terminal domain-containing protein n=1 Tax=... [more]
D0P3V3_PHYIT3.070e-5737.29Cobalamin synthesis protein, putative n=2 Tax=Phyt... [more]
B5Y598_PHATC6.050e-5736.83Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A225W6C1_9STRA9.850e-5736.61Cobalamin synthesis protein n=1 Tax=Phytophthora m... [more]
A0A0P1AZT7_PLAHL1.370e-5636.34Cobalamin synthesis protein n=1 Tax=Plasmopara hal... [more]
A0A662XB97_9STRA1.070e-5536.34Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57481contigH-elongata_contig57481:442..3060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score432.2
Seed ortholog evalue2.6e-118
Seed eggNOG ortholog2880.D7FVB8
Preferred nameCBWD1
KEGG koko:K12605
KEGG Pathwayko03018,map03018
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.ATP binding
EggNOG OGsCOG0523@1,KOG2743@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCobW/HypB/UreG domain
Ec32 orthologEc-14_000520.1
Exons3
Model size2146
Cds size1149
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57481.13217.1prot_H-elongata_contig57481.13217.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig57481 466..2087 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.9631517-UTR-H-elongata_contig57481:441..4651622930933.9631517-UTR-H-elongata_contig57481:441..465Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57481 442..465 +
1691679630.7652197-UTR-H-elongata_contig57481:441..4651691679630.7652197-UTR-H-elongata_contig57481:441..465Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57481 442..465 +
1622930934.0342302-UTR-H-elongata_contig57481:2087..30601622930934.0342302-UTR-H-elongata_contig57481:2087..3060Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57481 2088..3060 +
1691679630.8061137-UTR-H-elongata_contig57481:2087..30601691679630.8061137-UTR-H-elongata_contig57481:2087..3060Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57481 2088..3060 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.980761-CDS-H-elongata_contig57481:465..6121622930933.980761-CDS-H-elongata_contig57481:465..612Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57481 466..612 +
1691679630.77623-CDS-H-elongata_contig57481:465..6121691679630.77623-CDS-H-elongata_contig57481:465..612Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57481 466..612 +
1622930934.0009663-CDS-H-elongata_contig57481:903..11401622930934.0009663-CDS-H-elongata_contig57481:903..1140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57481 904..1140 +
1691679630.7854335-CDS-H-elongata_contig57481:903..11401691679630.7854335-CDS-H-elongata_contig57481:903..1140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57481 904..1140 +
1622930934.01717-CDS-H-elongata_contig57481:1322..20871622930934.01717-CDS-H-elongata_contig57481:1322..2087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57481 1323..2087 +
1691679630.7967741-CDS-H-elongata_contig57481:1322..20871691679630.7967741-CDS-H-elongata_contig57481:1322..2087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57481 1323..2087 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig57481.13217.1

>prot_H-elongata_contig57481.13217.1 ID=prot_H-elongata_contig57481.13217.1|Name=mRNA_H-elongata_contig57481.13217.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=383bp
MLADNLFELKNGCICCSVKDDLVTTLETLLQRRSMFDYIIIETTGLANPG
PVASVFWLDDALESALRLDGIVTLVDAKNFRRQLQRGPDENGADRENGER
KDQFDKARTAQNEAAVQVAYADRVLINKTDLVSKEVLANVIAQVQAINTM
AAVHCTTRSAVDIDWVLDTRCFSPELALVIDPSLAPTGTSTPGHHQGQHP
EGSGTVFETPTVPSLGNDSGNDSYIKETLAVESDGEVHTHDHGHGPHRNG
DDCARCNATSTSISKEDPSGNPCSVHDPAVTTCAIDILGSLELRRLERWL
GELLWEPPPGGTDVYRVKGVVSVEGRVERFVVQGVGDLFEVTPTGASGSA
WKEDEARHCKVVFIGKYISRDDLERGLRSCMV*
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mRNA from alignment at H-elongata_contig57481:442..3060+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig57481.13217.1 ID=mRNA_H-elongata_contig57481.13217.1|Name=mRNA_H-elongata_contig57481.13217.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2619bp|location=Sequence derived from alignment at H-elongata_contig57481:442..3060+ (Himanthalia elongata Himel1 dioecious)
TCGAAGGATGGTGCCGATGGATCGATGCTTGCGGACAACCTTTTTGAGCT GAAGAACGGTTGCATATGCTGCTCCGTCAAGGACGACCTCGTGACGACAC TTGAGACCCTATTGCAGCGCAGGAGCATGTTTGACTACATCATCATCGAG ACAACAGGCCTCGCTAACCCGGTGGGATCCCATACCCCACAGGATAACGA ATATATGGCCTCTACGTTCCGTAATCAGCAGGTTTTCGAGCATGACCTCT CATATCTTGACACATTATTTTATCGACCGTGCCTCTGGTTGAGTGTACTT CGATTTTTTACGATCACAGGGCCGATTCACCTCGGTAACCAGTGAAAATC GAAGTGATCGTAATTTTTACGTCGGAAAGTATCTGGTCGTGCTGAAGCTG AAAAAATGAAGGATCTCATACTGCGCTCCTGGCCTCTTGACATTTATGCT TTTTGACCTCAGGGTCCCGTTGCAAGCGTCTTTTGGCTAGATGACGCGTT GGAGAGCGCTCTGAGGCTTGATGGGATAGTTACTCTGGTTGACGCCAAGA ACTTCCGTCGACAGCTGCAGCGAGGCCCTGACGAGAACGGAGCGGATCGT GAAAATGGAGAGAGAAAAGACCAGTTCGACAAAGCCAGAACGGCCCAAAA TGAAGCCGCAGTACAAGTGGCCTACGCCGACCGCGTGCTCATCAACAAGG TCTGTGTATACCGATCATTCGCCGGCGGGTGGTTGTCTCGCATGTGTCCC TGCACGATTTAAACAGCAGCTCTGACACATCGATAACCGGCAATACTATA TTTTGAGACAACCATGCCGTTCGGTGTCCTGCCCCCGCCCCATCCCCGAC ACGCAACCTCAACCGCAACACCCTTTTCCAGACTGATCTTGTCTCCAAGG AGGTTCTTGCCAATGTCATTGCTCAAGTGCAAGCCATCAATACCATGGCC GCGGTTCATTGTACAACACGATCTGCGGTAGATATAGACTGGGTGTTGGA CACGAGATGTTTTTCCCCAGAGCTTGCACTTGTGATCGATCCGAGCCTCG CGCCGACGGGAACATCGACACCAGGACATCATCAAGGGCAGCACCCAGAG GGGTCTGGGACTGTGTTCGAGACACCGACAGTGCCTTCTTTGGGTAATGA CAGTGGCAATGATTCGTATATTAAAGAAACTCTCGCTGTCGAAAGTGATG GGGAGGTACACACGCACGACCACGGTCATGGCCCTCACAGGAACGGAGAT GATTGCGCCCGGTGTAACGCGACGTCGACGTCGATTTCAAAAGAAGACCC CAGCGGTAATCCTTGCTCTGTGCACGATCCAGCCGTCACGACTTGCGCCA TAGACATTTTGGGATCCTTGGAGCTCCGGCGTCTCGAGCGGTGGCTTGGA GAACTTTTGTGGGAACCCCCTCCGGGGGGAACGGACGTTTATCGAGTCAA GGGGGTTGTAAGCGTCGAAGGCAGGGTTGAGCGCTTTGTGGTGCAAGGCG TAGGAGATCTGTTCGAGGTGACGCCGACGGGGGCGAGCGGCAGCGCTTGG AAAGAGGATGAGGCTCGACATTGTAAGGTTGTCTTCATCGGCAAGTATAT TTCTAGGGACGACCTGGAGCGAGGGCTGAGGTCCTGCATGGTATAGCATT AATTTGTCACGGAATATGAAACAAGCTTGGTTTGAATCTACTTCAAAATA CTATATATAAGCTCTACATGAGAGCTGAGCCAAACATAATTGTCGTGACT AGCCTTGTACCGGTAGTGTGTAGATGCCATCGAGGATGACCCGAATTGAA GGCTCCGAATGTGTCCACCAGTTTATTTCAAGGGGCTCGAAGCCCCACCT TTGAACTCTTCGTATGACCCTATCTATTAACGAGCTTATTATCATGTGTG TGCTGTATTGGAACAATCGATATTCGTGAGAGGTTCTGTACTGTACCCGT AGTGGAGACTTGCGGCGAAGCTGCCAAATACAAATACGGCAGGGTAATAC GGCAGGGTAATACGGCAGGGTCATGTAAAATGAAAGCGAAGACAAAATAT TTCCGATTGGGGAATTTATGTAGTAATTGCAGGGGTGTTGCTTGGGTTGT GAAAAATACTGAGCAGAGCCGCGCGCTTGGATACTGATGAACTTATTTTT CGGATGAATATCAGGTATATAATATCGACCTTCCATTATAAAATATACTT AGCAGAGCTGCGCGCCTGAATCCTATCGATCTTCTGGCATCTGGCCGATC ATAGCTTAAACTGTCATTCTTATTTGTAGATAATGTTTATAACCCGAAGA GTTTTCATGCAAGCTTTGTTATGCTTCGTTGACTAAGCCTGCTGGTTGGG TCGTTAGAGTACTTCAACCTTTAAAGAAGGCTGGTGCATATGCCCTGCAC GTTTTAGTCAATGATTACATGTCTTCACTCAACGTGAATATTCACGCAAT TGTCACGCATTGATGTTGATCGTTGTAAAGTTACAATGTAAAATATCTTA AGTACAATGTATATTTTAGAGTCGCCTCTTTTTCGCTCAACACGTAAATG GTTTCTCGTATGATTGATTGGGATCGAACCCACAACCGAAATAATTTTTG ATAACAGTACAGTTTTGCC
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Coding sequence (CDS) from alignment at H-elongata_contig57481:442..3060+

>mRNA_H-elongata_contig57481.13217.1 ID=mRNA_H-elongata_contig57481.13217.1|Name=mRNA_H-elongata_contig57481.13217.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2298bp|location=Sequence derived from alignment at H-elongata_contig57481:442..3060+ (Himanthalia elongata Himel1 dioecious)
ATGCTTGCGGACAACCTTTTTGAGCTGAAGAACGGTTGCATATGCTGCTC
CGTCAAGGACGACCTCGTGACGACACTTGAGACCCTATTGCAGCGCAGGA
GCATGTTTGACTACATCATCATCGAGACAACAGGCCTCGCTAACCCGATG
CTTGCGGACAACCTTTTTGAGCTGAAGAACGGTTGCATATGCTGCTCCGT
CAAGGACGACCTCGTGACGACACTTGAGACCCTATTGCAGCGCAGGAGCA
TGTTTGACTACATCATCATCGAGACAACAGGCCTCGCTAACCCGGGTCCC
GTTGCAAGCGTCTTTTGGCTAGATGACGCGTTGGAGAGCGCTCTGAGGCT
TGATGGGATAGTTACTCTGGTTGACGCCAAGAACTTCCGTCGACAGCTGC
AGCGAGGCCCTGACGAGAACGGAGCGGATCGTGAAAATGGAGAGAGAAAA
GACCAGTTCGACAAAGCCAGAACGGCCCAAAATGAAGCCGCAGTACAAGT
GGCCTACGCCGACCGCGTGCTCATCAACAAGGGTCCCGTTGCAAGCGTCT
TTTGGCTAGATGACGCGTTGGAGAGCGCTCTGAGGCTTGATGGGATAGTT
ACTCTGGTTGACGCCAAGAACTTCCGTCGACAGCTGCAGCGAGGCCCTGA
CGAGAACGGAGCGGATCGTGAAAATGGAGAGAGAAAAGACCAGTTCGACA
AAGCCAGAACGGCCCAAAATGAAGCCGCAGTACAAGTGGCCTACGCCGAC
CGCGTGCTCATCAACAAGACTGATCTTGTCTCCAAGGAGGTTCTTGCCAA
TGTCATTGCTCAAGTGCAAGCCATCAATACCATGGCCGCGGTTCATTGTA
CAACACGATCTGCGGTAGATATAGACTGGGTGTTGGACACGAGATGTTTT
TCCCCAGAGCTTGCACTTGTGATCGATCCGAGCCTCGCGCCGACGGGAAC
ATCGACACCAGGACATCATCAAGGGCAGCACCCAGAGGGGTCTGGGACTG
TGTTCGAGACACCGACAGTGCCTTCTTTGGGTAATGACAGTGGCAATGAT
TCGTATATTAAAGAAACTCTCGCTGTCGAAAGTGATGGGGAGGTACACAC
GCACGACCACGGTCATGGCCCTCACAGGAACGGAGATGATTGCGCCCGGT
GTAACGCGACGTCGACGTCGATTTCAAAAGAAGACCCCAGCGGTAATCCT
TGCTCTGTGCACGATCCAGCCGTCACGACTTGCGCCATAGACATTTTGGG
ATCCTTGGAGCTCCGGCGTCTCGAGCGGTGGCTTGGAGAACTTTTGTGGG
AACCCCCTCCGGGGGGAACGGACGTTTATCGAGTCAAGGGGGTTGTAAGC
GTCGAAGGCAGGGTTGAGCGCTTTGTGGTGCAAGGCGTAGGAGATCTGTT
CGAGGTGACGCCGACGGGGGCGAGCGGCAGCGCTTGGAAAGAGGATGAGG
CTCGACATTGTAAGGTTGTCTTCATCGGCAAGTATATTTCTAGGGACGAC
CTGGAGCGAGGGCTGAGGTCCTGCATGGTATAGACTGATCTTGTCTCCAA
GGAGGTTCTTGCCAATGTCATTGCTCAAGTGCAAGCCATCAATACCATGG
CCGCGGTTCATTGTACAACACGATCTGCGGTAGATATAGACTGGGTGTTG
GACACGAGATGTTTTTCCCCAGAGCTTGCACTTGTGATCGATCCGAGCCT
CGCGCCGACGGGAACATCGACACCAGGACATCATCAAGGGCAGCACCCAG
AGGGGTCTGGGACTGTGTTCGAGACACCGACAGTGCCTTCTTTGGGTAAT
GACAGTGGCAATGATTCGTATATTAAAGAAACTCTCGCTGTCGAAAGTGA
TGGGGAGGTACACACGCACGACCACGGTCATGGCCCTCACAGGAACGGAG
ATGATTGCGCCCGGTGTAACGCGACGTCGACGTCGATTTCAAAAGAAGAC
CCCAGCGGTAATCCTTGCTCTGTGCACGATCCAGCCGTCACGACTTGCGC
CATAGACATTTTGGGATCCTTGGAGCTCCGGCGTCTCGAGCGGTGGCTTG
GAGAACTTTTGTGGGAACCCCCTCCGGGGGGAACGGACGTTTATCGAGTC
AAGGGGGTTGTAAGCGTCGAAGGCAGGGTTGAGCGCTTTGTGGTGCAAGG
CGTAGGAGATCTGTTCGAGGTGACGCCGACGGGGGCGAGCGGCAGCGCTT
GGAAAGAGGATGAGGCTCGACATTGTAAGGTTGTCTTCATCGGCAAGTAT
ATTTCTAGGGACGACCTGGAGCGAGGGCTGAGGTCCTGCATGGTATAG
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